RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 PRAMEF19Q5SWL8 479 aa12.57□□□□□ -0.4
SCAF11-201ENST00000266589 CDCA2Q69YH5 1023 aaPredicted RBP12.57□□□□□ -0.4
SCAF11-201ENST00000266589 EFCAB12Q6NXP0 572 aa12.57□□□□□ -0.4
SCAF11-201ENST00000266589 RHPN2Q8IUC4 686 aa12.57□□□□□ -0.4
SCAF11-201ENST00000266589 ZBTB8OSQ8IWT0 167 aa12.57□□□□□ -0.4
SCAF11-201ENST00000266589 METTL13Q8N6R0 699 aa12.57□□□□□ -0.4
SCAF11-201ENST00000266589 USP6NLQ92738 828 aa12.57□□□□□ -0.4
SCAF11-201ENST00000266589 TARS2Q9BW92 718 aaKnown RBP12.57□□□□□ -0.4
SCAF11-201ENST00000266589 ANKFY1Q9P2R3 1169 aa12.57□□□□□ -0.4
SCAF11-201ENST00000266589 APEX2Q9UBZ4 518 aa12.57□□□□□ -0.4
SCAF11-201ENST00000266589 TRIM10Q9UDY6 481 aa12.57□□□□□ -0.4
SCAF11-201ENST00000266589 ZNF215Q9UL58 517 aaPredicted RBP12.57□□□□□ -0.4
SCAF11-201ENST00000266589 TFR2Q9UP52 801 aa12.57□□□□□ -0.4
SCAF11-201ENST00000266589 ZSWIM8A7E2V4 1837 aa12.57□□□□□ -0.4
SCAF11-201ENST00000266589 MGAMO43451 1857 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 EVPLQ92817 2033 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 LRRIQ3A6PVS8 624 aaPredicted RBP12.56□□□□□ -0.4
SCAF11-201ENST00000266589 H3BRB1 525 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 KIF3CO14782 793 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 TNPO2O14787 897 aaKnown RBP12.56□□□□□ -0.4
SCAF11-201ENST00000266589 KIAA0391O15091 583 aaKnown RBP12.56□□□□□ -0.4
SCAF11-201ENST00000266589 EXTL3O43909 919 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 LCA5LO95447 670 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 GJB1P08034 283 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 CYP2B6P20813 491 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 CASQ1P31415 396 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 MATR3P43243 847 aaKnown RBP eCLIP12.56□□□□□ -0.43e-6■■□□□ 12.9
SCAF11-201ENST00000266589 CCL14Q16627 93 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 ASTE1Q2TB18 679 aaPredicted RBP12.56□□□□□ -0.4
SCAF11-201ENST00000266589 EPC2Q52LR7 807 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 CCDC122Q5T0U0 273 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 SLFN12LQ6IEE8 588 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 PAXIP1Q6ZW49 1069 aaPredicted RBP12.56□□□□□ -0.4
SCAF11-201ENST00000266589 USP37Q86T82 979 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 EHBP1Q8NDI1 1231 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 LMO3Q8TAP4 145 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 TMC2Q8TDI7 906 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 JAKMIP2Q96AA8 810 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 ZBTB45Q96K62 511 aaPredicted RBP12.56□□□□□ -0.4
SCAF11-201ENST00000266589 ZIC5Q96T25 663 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 IFIH1Q9BYX4 1025 aaKnown RBP12.56□□□□□ -0.4
SCAF11-201ENST00000266589 HAPLN2Q9GZV7 340 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 TMEM117Q9H0C3 514 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 CCDC113Q9H0I3 377 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 HAUS4Q9H6D7 363 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 TUT1Q9H6E5 874 aaKnown RBP12.56□□□□□ -0.4
SCAF11-201ENST00000266589 KIAA1586Q9HCI6 787 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 DNAJC12Q9UKB3 198 aa12.56□□□□□ -0.4
SCAF11-201ENST00000266589 AGO2Q9UKV8 859 aaKnown RBP12.56□□□□□ -0.4
SCAF11-201ENST00000266589 ZNF233A6NK53 670 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 TMEM88BA6NKF7 163 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 HOXD8P13378 290 aaPredicted RBP12.55□□□□□ -0.4
SCAF11-201ENST00000266589 CYP2C19P33261 490 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 RGS2P41220 211 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 VAV2P52735 878 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 MAP2K1Q02750 393 aaPredicted RBP12.55□□□□□ -0.4
SCAF11-201ENST00000266589 GFPT1Q06210 699 aaPredicted RBP12.55□□□□□ -0.4
SCAF11-201ENST00000266589 TFDP1Q14186 410 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 DGKDQ16760 1214 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 ZNF569Q5MCW4 686 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 SOCS4Q8WXH5 440 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 NLRP4Q96MN2 994 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 POP1Q99575 1024 aaKnown RBP12.55□□□□□ -0.4
SCAF11-201ENST00000266589 APBA2Q99767 749 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 C2orf40Q9H1Z8 148 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 TOPORSQ9NS56 1045 aaPredicted RBP12.55□□□□□ -0.4
SCAF11-201ENST00000266589 GUCA1BQ9UMX6 200 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 PCDHA13Q9Y5I0 950 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 COL1A2P08123 1366 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 RCCD1A6NED2 376 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 PMM2O15305 246 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 KRT86O43790 486 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 MSCO60682 206 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 PRKCBP05771 671 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 PNMA6AP0CW24 399 aaPredicted RBP12.55□□□□□ -0.4
SCAF11-201ENST00000266589 DLATP10515 647 aaKnown RBP12.55□□□□□ -0.4
SCAF11-201ENST00000266589 KLRC1P26715 233 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 TM4SF4P48230 202 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 ACOT2P49753 483 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 NLRP11P59045 1033 aaKnown RBP12.55□□□□□ -0.4
SCAF11-201ENST00000266589 IRF5Q13568 498 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 MAPK6Q16659 721 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 KRT39Q6A163 491 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 PHLDB3Q6NSJ2 640 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 ZPBP2Q6X784 338 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 ZNF662Q6ZS27 426 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 IRF2BP2Q7Z5L9 587 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 HHIPL1Q96JK4 782 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 ZNF668Q96K58 619 aaPredicted RBP12.55□□□□□ -0.4
SCAF11-201ENST00000266589 MSTO1Q9BUK6 570 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 MRPL4Q9BYD3 311 aaKnown RBP12.55□□□□□ -0.4
SCAF11-201ENST00000266589 STK33Q9BYT3 514 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 LACRTQ9GZZ8 138 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 TMEM8AQ9HCN3 771 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 DAAM1Q9Y4D1 1078 aa12.55□□□□□ -0.4
SCAF11-201ENST00000266589 A0A0B4J269 797 aa12.54□□□□□ -0.4
SCAF11-201ENST00000266589 TTLL13PA6NNM8 815 aa12.54□□□□□ -0.4
SCAF11-201ENST00000266589 F8VZ95 297 aa12.54□□□□□ -0.4
SCAF11-201ENST00000266589 MAGEB2O15479 319 aa12.54□□□□□ -0.4
SCAF11-201ENST00000266589 DYNC1LI2O43237 492 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms