RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 KRT79Q5XKE5 535 aa17.79■□□□□ 0.44
USE1-201ENST00000263897 SLC27A1Q6PCB7 646 aa17.79■□□□□ 0.44
USE1-201ENST00000263897 PPP4R3CPQ6ZMV5 832 aa17.79■□□□□ 0.44
USE1-201ENST00000263897 TMEM173Q86WV6 379 aaPredicted RBP17.79■□□□□ 0.44
USE1-201ENST00000263897 ZBTB8OSQ8IWT0 167 aa17.79■□□□□ 0.44
USE1-201ENST00000263897 ADHFE1Q8IWW8 467 aa17.79■□□□□ 0.44
USE1-201ENST00000263897 VPS52Q8N1B4 723 aa17.79■□□□□ 0.44
USE1-201ENST00000263897 SMRP1Q8NCR6 262 aa17.79■□□□□ 0.44
USE1-201ENST00000263897 BSNDQ8WZ55 320 aa17.79■□□□□ 0.44
USE1-201ENST00000263897 KHSRPQ92945 711 aaKnown RBP eCLIP17.79■□□□□ 0.44
USE1-201ENST00000263897 PRIMPOLQ96LW4 560 aa17.79■□□□□ 0.44
USE1-201ENST00000263897 FAM193BQ96PV7 902 aaPredicted RBP17.79■□□□□ 0.44
USE1-201ENST00000263897 EPHX3Q9H6B9 360 aa17.79■□□□□ 0.44
USE1-201ENST00000263897 POLD4Q9HCU8 107 aa17.79■□□□□ 0.44
USE1-201ENST00000263897 PRMT7Q9NVM4 692 aaPredicted RBP17.79■□□□□ 0.44
USE1-201ENST00000263897 DNM3Q9UQ16 869 aa17.79■□□□□ 0.44
USE1-201ENST00000263897 MUC3AQ02505 3323 aa17.79■□□□□ 0.44
USE1-201ENST00000263897 ARL5CA6NH57 179 aa17.78■□□□□ 0.44
USE1-201ENST00000263897 C19orf67A6NJJ6 358 aa17.78■□□□□ 0.44
USE1-201ENST00000263897 PP2D1A8MPX8 630 aa17.78■□□□□ 0.44
USE1-201ENST00000263897 E9PMD0 336 aa17.78■□□□□ 0.44
USE1-201ENST00000263897 NAMPTP43490 491 aa17.78■□□□□ 0.44
USE1-201ENST00000263897 ATP2C1P98194 919 aaPredicted RBP17.78■□□□□ 0.44
USE1-201ENST00000263897 ZP2Q05996 745 aa17.78■□□□□ 0.44
USE1-201ENST00000263897 PPP2R5AQ15172 486 aa17.78■□□□□ 0.44
USE1-201ENST00000263897 CDR2LQ86X02 465 aaPredicted RBP17.78■□□□□ 0.44
USE1-201ENST00000263897 BCL7CQ8WUZ0 217 aaPredicted RBP17.78■□□□□ 0.44
USE1-201ENST00000263897 GAD1Q99259 594 aa17.78■□□□□ 0.44
USE1-201ENST00000263897 TMEM175Q9BSA9 504 aa17.78■□□□□ 0.44
USE1-201ENST00000263897 MMTAG2Q9BU76 263 aaKnown RBP17.78■□□□□ 0.44
USE1-201ENST00000263897 C1QTNF1Q9BXJ1 281 aa17.78■□□□□ 0.44
USE1-201ENST00000263897 BACH2Q9BYV9 841 aa17.78■□□□□ 0.44
USE1-201ENST00000263897 TRIM6Q9C030 488 aaPredicted RBP17.78■□□□□ 0.44
USE1-201ENST00000263897 C2orf40Q9H1Z8 148 aa17.78■□□□□ 0.44
USE1-201ENST00000263897 FAN1Q9Y2M0 1017 aa17.78■□□□□ 0.44
USE1-201ENST00000263897 GIT1Q9Y2X7 761 aa17.78■□□□□ 0.44
USE1-201ENST00000263897 PI4K2BG5E9Z4 385 aa17.77■□□□□ 0.44
USE1-201ENST00000263897 NPTXRO95502 500 aa17.77■□□□□ 0.44
USE1-201ENST00000263897 CUL4AQ13619 759 aa17.77■□□□□ 0.44
USE1-201ENST00000263897 HACE1Q8IYU2 909 aa17.77■□□□□ 0.44
USE1-201ENST00000263897 KIFAP3Q92845 792 aa17.77■□□□□ 0.44
USE1-201ENST00000263897 IFT74Q96LB3 600 aa17.77■□□□□ 0.44
USE1-201ENST00000263897 ZBP1Q9H171 429 aa17.77■□□□□ 0.44
USE1-201ENST00000263897 NXF3Q9H4D5 531 aaKnown RBP17.77■□□□□ 0.44
USE1-201ENST00000263897 MIOSQ9NXC5 875 aa17.77■□□□□ 0.44
USE1-201ENST00000263897 IRAK3Q9Y616 596 aa17.77■□□□□ 0.44
USE1-201ENST00000263897 TTLL13PA6NNM8 815 aa17.76■□□□□ 0.43
USE1-201ENST00000263897 ACKR2O00590 384 aa17.76■□□□□ 0.43
USE1-201ENST00000263897 NRP1O14786 923 aa17.76■□□□□ 0.43
USE1-201ENST00000263897 SRGAP2BP0DMP2 458 aa17.76■□□□□ 0.43
USE1-201ENST00000263897 CTSAP10619 480 aa17.76■□□□□ 0.43
USE1-201ENST00000263897 MLH1P40692 756 aa17.76■□□□□ 0.43
USE1-201ENST00000263897 MAPK6Q16659 721 aa17.76■□□□□ 0.43
USE1-201ENST00000263897 ARL6IP4Q66PJ3 421 aaKnown RBP17.76■□□□□ 0.43
USE1-201ENST00000263897 COLGALT2Q8IYK4 626 aa17.76■□□□□ 0.43
USE1-201ENST00000263897 DEPTORQ8TB45 409 aa17.76■□□□□ 0.43
USE1-201ENST00000263897 ZFP42Q96MM3 310 aa17.76■□□□□ 0.43
USE1-201ENST00000263897 APOL6Q9BWW8 343 aa17.76■□□□□ 0.43
USE1-201ENST00000263897 VN1R3Q9BXE9 311 aa17.76■□□□□ 0.43
USE1-201ENST00000263897 CCDC113Q9H0I3 377 aa17.76■□□□□ 0.43
USE1-201ENST00000263897 STK39Q9UEW8 545 aa17.76■□□□□ 0.43
USE1-201ENST00000263897 CLASP2O75122 1294 aaKnown RBP17.75■□□□□ 0.43
USE1-201ENST00000263897 AKAP5P24588 427 aa17.75■□□□□ 0.43
USE1-201ENST00000263897 SCNN1GP51170 649 aa17.75■□□□□ 0.43
USE1-201ENST00000263897 EFNA5P52803 228 aa17.75■□□□□ 0.43
USE1-201ENST00000263897 DSC1Q08554 894 aa17.75■□□□□ 0.43
USE1-201ENST00000263897 PRPF4BQ13523 1007 aaKnown RBP17.75■□□□□ 0.43
USE1-201ENST00000263897 GIT2Q14161 759 aa17.75■□□□□ 0.43
USE1-201ENST00000263897 HYIQ5T013 277 aa17.75■□□□□ 0.43
USE1-201ENST00000263897 ANKRD54Q6NXT1 300 aa17.75■□□□□ 0.43
USE1-201ENST00000263897 LLGL2Q6P1M3 1020 aa17.75■□□□□ 0.43
USE1-201ENST00000263897 KCNK18Q7Z418 384 aa17.75■□□□□ 0.43
USE1-201ENST00000263897 KCTD17Q8N5Z5 321 aa17.75■□□□□ 0.43
USE1-201ENST00000263897 GSTCDQ8NEC7 633 aa17.75■□□□□ 0.43
USE1-201ENST00000263897 AUTS2Q8WXX7 1259 aa17.75■□□□□ 0.43
USE1-201ENST00000263897 POP1Q99575 1024 aaKnown RBP17.75■□□□□ 0.43
USE1-201ENST00000263897 S1PR5Q9H228 398 aa17.75■□□□□ 0.43
USE1-201ENST00000263897 USP15Q9Y4E8 981 aaPredicted RBP17.75■□□□□ 0.43
USE1-201ENST00000263897 VWA3AA6NCI4 1184 aa17.74■□□□□ 0.43
USE1-201ENST00000263897 N4BP3O15049 544 aa17.74■□□□□ 0.43
USE1-201ENST00000263897 PRKCBP05771 671 aa17.74■□□□□ 0.43
USE1-201ENST00000263897 HOXB8P17481 243 aaPredicted RBP17.74■□□□□ 0.43
USE1-201ENST00000263897 CA8P35219 290 aa17.74■□□□□ 0.43
USE1-201ENST00000263897 RINT1Q6NUQ1 792 aa17.74■□□□□ 0.43
USE1-201ENST00000263897 SYCE2Q6PIF2 218 aa17.74■□□□□ 0.43
USE1-201ENST00000263897 C1orf186Q6ZWK4 172 aa17.74■□□□□ 0.43
USE1-201ENST00000263897 PDZD7Q9H5P4 517 aa17.74■□□□□ 0.43
USE1-201ENST00000263897 PARP2Q9UGN5 583 aa17.74■□□□□ 0.43
USE1-201ENST00000263897 USP20Q9Y2K6 914 aa17.74■□□□□ 0.43
USE1-201ENST00000263897 HCFC2Q9Y5Z7 792 aa17.74■□□□□ 0.43
USE1-201ENST00000263897 TDRD15B5MCY1 1934 aaKnown RBP17.74■□□□□ 0.43
USE1-201ENST00000263897 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.73■□□□□ 0.43
USE1-201ENST00000263897 K7ERI5 159 aa17.73■□□□□ 0.43
USE1-201ENST00000263897 LIG1P18858 919 aa17.73■□□□□ 0.43
USE1-201ENST00000263897 OR1G1P47890 313 aa17.73■□□□□ 0.43
USE1-201ENST00000263897 ZRSR1Q15695 479 aaKnown RBP17.73■□□□□ 0.43
USE1-201ENST00000263897 TMEM132AQ24JP5 1023 aa17.73■□□□□ 0.43
USE1-201ENST00000263897 BRAPQ7Z569 592 aa17.73■□□□□ 0.43
USE1-201ENST00000263897 DAW1Q8N136 415 aa17.73■□□□□ 0.43
USE1-201ENST00000263897 TMEM87AQ8NBN3 555 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms