RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 SUPT3HO75486 399 aa15.14■□□□□ 0.02
CUX2-201ENST00000261726 ASMTLO95671 621 aa15.14■□□□□ 0.02
CUX2-201ENST00000261726 KRT8P05787 483 aa15.14■□□□□ 0.02
CUX2-201ENST00000261726 TRIM60Q495X7 471 aa15.14■□□□□ 0.02
CUX2-201ENST00000261726 COBLL1Q53SF7 1204 aa15.14■□□□□ 0.02
CUX2-201ENST00000261726 FAM96AQ9H5X1 160 aa15.14■□□□□ 0.02
CUX2-201ENST00000261726 HSPA1AP0DMV8 641 aaKnown RBP15.14■□□□□ 0.01
CUX2-201ENST00000261726 HSPA1BP0DMV9 641 aaKnown RBP15.14■□□□□ 0.01
CUX2-201ENST00000261726 SH3RF3Q8TEJ3 882 aaPredicted RBP15.14■□□□□ 0.01
CUX2-201ENST00000261726 ALG13Q9NP73 1137 aaKnown RBP15.14■□□□□ 0.01
CUX2-201ENST00000261726 TMEM161AQ9NX61 479 aa15.14■□□□□ 0.01
CUX2-201ENST00000261726 SELENONQ9NZV5 590 aa15.14■□□□□ 0.01
CUX2-201ENST00000261726 USP17L5A8MUK1 530 aa15.14■□□□□ 0.01
CUX2-201ENST00000261726 MEFVO15553 781 aaPredicted RBP15.14■□□□□ 0.01
CUX2-201ENST00000261726 CHRNA3P32297 505 aa15.14■□□□□ 0.01
CUX2-201ENST00000261726 LRRC74AQ0VAA2 488 aa15.14■□□□□ 0.01
CUX2-201ENST00000261726 EFHC2Q5JST6 749 aa15.14■□□□□ 0.01
CUX2-201ENST00000261726 TBC1D9BQ66K14 1250 aa15.14■□□□□ 0.01
CUX2-201ENST00000261726 KIAA2013Q8IYS2 634 aa15.14■□□□□ 0.01
CUX2-201ENST00000261726 FAM217BQ9NTX9 383 aaPredicted RBP15.14■□□□□ 0.01
CUX2-201ENST00000261726 PADI6Q6TGC4 694 aa15.14■□□□□ 0.01
CUX2-201ENST00000261726 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.14■□□□□ 0.01
CUX2-201ENST00000261726 UNC45AQ9H3U1 944 aa15.14■□□□□ 0.01
CUX2-201ENST00000261726 ARHGAP10A1A4S6 786 aa15.14■□□□□ 0.01
CUX2-201ENST00000261726 ATP5HO75947 161 aa15.14■□□□□ 0.01
CUX2-201ENST00000261726 NBPF20Q3BBV1 942 aa15.14■□□□□ 0.01
CUX2-201ENST00000261726 NBPF10Q6P3W6 841 aaKnown RBP15.14■□□□□ 0.01
CUX2-201ENST00000261726 ANO5Q75V66 913 aa15.14■□□□□ 0.01
CUX2-201ENST00000261726 ZNF302Q9NR11 478 aa15.14■□□□□ 0.01
CUX2-201ENST00000261726 NDE1Q9NXR1 346 aa15.14■□□□□ 0.01
CUX2-201ENST00000261726 QRICH2Q9H0J4 1663 aa15.13■□□□□ 0.01
CUX2-201ENST00000261726 MRPS15P82914 257 aaKnown RBP15.13■□□□□ 0.01
CUX2-201ENST00000261726 WASHC5Q12768 1159 aa15.13■□□□□ 0.01
CUX2-201ENST00000261726 PKN3Q6P5Z2 889 aa15.13■□□□□ 0.01
CUX2-201ENST00000261726 FBXO38Q6PIJ6 1188 aa15.13■□□□□ 0.01
CUX2-201ENST00000261726 TRPC7Q9HCX4 862 aa15.13■□□□□ 0.01
CUX2-201ENST00000261726 KDM1AO60341 852 aa15.13■□□□□ 0.01
CUX2-201ENST00000261726 ZFXP17010 805 aaPredicted RBP15.13■□□□□ 0.01
CUX2-201ENST00000261726 CYTH1Q15438 398 aa15.13■□□□□ 0.01
CUX2-201ENST00000261726 OSBPL1AQ9BXW6 950 aa15.13■□□□□ 0.01
CUX2-201ENST00000261726 PIH1D3Q9NQM4 214 aaKnown RBP15.13■□□□□ 0.01
CUX2-201ENST00000261726 STAP1Q9ULZ2 295 aa15.13■□□□□ 0.01
CUX2-201ENST00000261726 SPDYAQ5MJ70 313 aa15.13■□□□□ 0.01
CUX2-201ENST00000261726 ADCK2Q7Z695 626 aa15.13■□□□□ 0.01
CUX2-201ENST00000261726 YAF2Q8IY57 180 aa15.13■□□□□ 0.01
CUX2-201ENST00000261726 DIP2CQ9Y2E4 1556 aa15.13■□□□□ 0.01
CUX2-201ENST00000261726 ACTN3Q08043 901 aaPredicted RBP15.13■□□□□ 0.01
CUX2-201ENST00000261726 ZNF235Q14590 738 aa15.13■□□□□ 0.01
CUX2-201ENST00000261726 MFN1Q8IWA4 741 aa15.13■□□□□ 0.01
CUX2-201ENST00000261726 NUP93Q8N1F7 819 aa15.13■□□□□ 0.01
CUX2-201ENST00000261726 XXYLT1Q8NBI6 393 aa15.13■□□□□ 0.01
CUX2-201ENST00000261726 SAAL1Q96ER3 474 aa15.13■□□□□ 0.01
CUX2-201ENST00000261726 MAD2L2Q9UI95 211 aa15.13■□□□□ 0.01
CUX2-201ENST00000261726 ZNF711Q9Y462 761 aa15.13■□□□□ 0.01
CUX2-201ENST00000261726 IFNAR1P17181 557 aa15.13■□□□□ 0.01
CUX2-201ENST00000261726 SOX11P35716 441 aa15.13■□□□□ 0.01
CUX2-201ENST00000261726 IL6STP40189 918 aaPredicted RBP15.13■□□□□ 0.01
CUX2-201ENST00000261726 ALDH18A1P54886 795 aaKnown RBP15.13■□□□□ 0.01
CUX2-201ENST00000261726 ARID5BQ14865 1188 aa15.13■□□□□ 0.01
CUX2-201ENST00000261726 SNRNP48Q6IEG0 339 aaKnown RBP15.13■□□□□ 0.01
CUX2-201ENST00000261726 WDR47O94967 919 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 LARGE1O95461 756 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 TYK2P29597 1187 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 TRPC1P48995 793 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 FAM102AQ5T9C2 384 aaPredicted RBP15.12■□□□□ 0.01
CUX2-201ENST00000261726 DEPDC1Q5TB30 811 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 UNC13DQ70J99 1090 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 CPVLQ9H3G5 476 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 GPR108Q9NPR9 543 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 STOML1Q9UBI4 398 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 TEX9Q8N6V9 391 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 ABHD10Q9NUJ1 306 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 SLC9A2Q9UBY0 812 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 SRP68Q9UHB9 627 aaKnown RBP15.12■□□□□ 0.01
CUX2-201ENST00000261726 IP6K2Q9UHH9 426 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 ARHGAP26Q9UNA1 814 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 ORC4O43929 436 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 BRAFP15056 766 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 ITPRIPL1Q6GPH6 555 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 NFRKBQ6P4R8 1299 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 BTNL9Q6UXG8 535 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 TMC4Q7Z404 712 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 TADA2BQ86TJ2 420 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 DCUN1D1Q96GG9 259 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 RCOR1Q9UKL0 485 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 VAMP7P51809 220 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 RAB42Q8N4Z0 105 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 BRIP1Q9BX63 1249 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 EML4Q9HC35 981 aaKnown RBP15.12■□□□□ 0.01
CUX2-201ENST00000261726 TRAF3IP3Q9Y228 551 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 ZHX2Q9Y6X8 837 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 ESYT3A0FGR9 886 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 KRT87PA6NCN2 255 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 A8MXQ7 604 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 MIF4GDA9UHW6 222 aaKnown RBP15.12■□□□□ 0.01
CUX2-201ENST00000261726 ADCY3O60266 1144 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 IL10P22301 178 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 HNRNPH2P55795 449 aaKnown RBP15.12■□□□□ 0.01
CUX2-201ENST00000261726 CAV1Q03135 178 aa15.12■□□□□ 0.01
CUX2-201ENST00000261726 SYTL3Q4VX76 610 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms