RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 PPM1AP35813 382 aa27.64■■■□□ 2.02
LSM7-201ENST00000252622 UBE3AQ05086 875 aa27.64■■■□□ 2.02
LSM7-201ENST00000252622 KCNT2Q6UVM3 1135 aa27.64■■■□□ 2.02
LSM7-201ENST00000252622 CDR2LQ86X02 465 aaPredicted RBP27.64■■■□□ 2.02
LSM7-201ENST00000252622 THNSL1Q8IYQ7 743 aa27.64■■■□□ 2.02
LSM7-201ENST00000252622 INPP5FQ9Y2H2 1132 aa27.64■■■□□ 2.02
LSM7-201ENST00000252622 CARNS1A5YM72 827 aa27.63■■■□□ 2.01
LSM7-201ENST00000252622 SFI1A8K8P3 1242 aa27.63■■■□□ 2.01
LSM7-201ENST00000252622 K7ERI5 159 aa27.63■■■□□ 2.01
LSM7-201ENST00000252622 FGF18O76093 207 aa27.63■■■□□ 2.01
LSM7-201ENST00000252622 LIG1P18858 919 aa27.63■■■□□ 2.01
LSM7-201ENST00000252622 CAMK1Q14012 370 aa27.63■■■□□ 2.01
LSM7-201ENST00000252622 TMEM132AQ24JP5 1023 aa27.63■■■□□ 2.01
LSM7-201ENST00000252622 REEP2Q9BRK0 252 aa27.63■■■□□ 2.01
LSM7-201ENST00000252622 NXF3Q9H4D5 531 aaKnown RBP27.63■■■□□ 2.01
LSM7-201ENST00000252622 NSUN3Q9H649 340 aaKnown RBP27.63■■■□□ 2.01
LSM7-201ENST00000252622 KANSL3Q9P2N6 904 aa27.63■■■□□ 2.01
LSM7-201ENST00000252622 PRUNE2Q8WUY3 3088 aa27.63■■■□□ 2.01
LSM7-201ENST00000252622 NPHP3-ACAD11A0A0J9YXS1 232 aa27.62■■■□□ 2.01
LSM7-201ENST00000252622 SMTNP53814 917 aa27.62■■■□□ 2.01
LSM7-201ENST00000252622 PLCB3Q01970 1234 aa27.62■■■□□ 2.01
LSM7-201ENST00000252622 DHX8Q14562 1220 aaKnown RBP27.62■■■□□ 2.01
LSM7-201ENST00000252622 SKIV2LQ15477 1246 aaKnown RBP27.62■■■□□ 2.01
LSM7-201ENST00000252622 FOXD4L6Q3SYB3 417 aaPredicted RBP27.62■■■□□ 2.01
LSM7-201ENST00000252622 RRAGBQ5VZM2 374 aa27.62■■■□□ 2.01
LSM7-201ENST00000252622 FOXD4L3Q6VB84 417 aaPredicted RBP27.62■■■□□ 2.01
LSM7-201ENST00000252622 CCDC73Q6ZRK6 1079 aa27.62■■■□□ 2.01
LSM7-201ENST00000252622 KCNG4Q8TDN1 519 aa27.62■■■□□ 2.01
LSM7-201ENST00000252622 POF1BQ8WVV4 589 aa27.62■■■□□ 2.01
LSM7-201ENST00000252622 ADPGKQ9BRR6 497 aa27.62■■■□□ 2.01
LSM7-201ENST00000252622 RNF39Q9H2S5 420 aa27.62■■■□□ 2.01
LSM7-201ENST00000252622 PRDM6Q9NQX0 595 aa27.62■■■□□ 2.01
LSM7-201ENST00000252622 LARSQ9P2J5 1176 aaKnown RBP27.62■■■□□ 2.01
LSM7-201ENST00000252622 THEGQ9P2T0 379 aa27.62■■■□□ 2.01
LSM7-201ENST00000252622 GIT1Q9Y2X7 761 aa27.62■■■□□ 2.01
LSM7-201ENST00000252622 HES2Q9Y543 173 aa27.62■■■□□ 2.01
LSM7-201ENST00000252622 SLC16A4O15374 487 aa27.61■■■□□ 2.01
LSM7-201ENST00000252622 CUTAO60888 179 aa27.61■■■□□ 2.01
LSM7-201ENST00000252622 DNAJB1P25685 340 aa27.61■■■□□ 2.01
LSM7-201ENST00000252622 ZNF131P52739 623 aa27.61■■■□□ 2.01
LSM7-201ENST00000252622 CACNB1Q02641 598 aaPredicted RBP27.61■■■□□ 2.01
LSM7-201ENST00000252622 NT5DC1Q5TFE4 455 aa27.61■■■□□ 2.01
LSM7-201ENST00000252622 TAS1R3Q7RTX0 852 aa27.61■■■□□ 2.01
LSM7-201ENST00000252622 CFAP45Q9UL16 551 aa27.61■■■□□ 2.01
LSM7-201ENST00000252622 LZTS1Q9Y250 596 aa27.61■■■□□ 2.01
LSM7-201ENST00000252622 KRT18P05783 430 aaKnown RBP27.6■■■□□ 2.01
LSM7-201ENST00000252622 RNASELQ05823 741 aaKnown RBP27.6■■■□□ 2.01
LSM7-201ENST00000252622 GIT2Q14161 759 aa27.6■■■□□ 2.01
LSM7-201ENST00000252622 DCAF4L1Q3SXM0 396 aa27.6■■■□□ 2.01
LSM7-201ENST00000252622 ATF7IP2Q5U623 682 aa27.6■■■□□ 2.01
LSM7-201ENST00000252622 SLC39A11Q8N1S5 342 aa27.6■■■□□ 2.01
LSM7-201ENST00000252622 TMEM161BQ8NDZ6 487 aa27.6■■■□□ 2.01
LSM7-201ENST00000252622 KCNN1Q92952 543 aa27.6■■■□□ 2.01
LSM7-201ENST00000252622 MRPL4Q9BYD3 311 aaKnown RBP27.6■■■□□ 2.01
LSM7-201ENST00000252622 NRDE2Q9H7Z3 1164 aa27.6■■■□□ 2.01
LSM7-201ENST00000252622 SPG21Q9NZD8 308 aa27.6■■■□□ 2.01
LSM7-201ENST00000252622 TNFSF13BQ9Y275 285 aa27.6■■■□□ 2.01
LSM7-201ENST00000252622 USP20Q9Y2K6 914 aa27.6■■■□□ 2.01
LSM7-201ENST00000252622 ZDHHC9Q9Y397 364 aa27.6■■■□□ 2.01
LSM7-201ENST00000252622 PLXNA4Q9HCM2 1894 aa27.59■■■□□ 2.01
LSM7-201ENST00000252622 ATG2AQ2TAZ0 1938 aa27.59■■■□□ 2.01
LSM7-201ENST00000252622 ARL5CA6NH57 179 aa27.59■■■□□ 2.01
LSM7-201ENST00000252622 H0YCG3 227 aa27.59■■■□□ 2.01
LSM7-201ENST00000252622 ZC3H11AO75152 810 aaKnown RBP eCLIP27.59■■■□□ 2.012e-9■□□□□ 8.9
LSM7-201ENST00000252622 PBX3P40426 434 aa27.59■■■□□ 2.01
LSM7-201ENST00000252622 ALDH7A1P49419 539 aaKnown RBP27.59■■■□□ 2.01
LSM7-201ENST00000252622 AFF1P51825 1210 aaKnown RBP27.59■■■□□ 2.01
LSM7-201ENST00000252622 BCAR1P56945 870 aa27.59■■■□□ 2.01
LSM7-201ENST00000252622 DNM1Q05193 864 aaKnown RBP27.59■■■□□ 2.01
LSM7-201ENST00000252622 TCEAL5Q5H9L2 206 aa27.59■■■□□ 2.01
LSM7-201ENST00000252622 EEF1DP3Q658K8 133 aa27.59■■■□□ 2.01
LSM7-201ENST00000252622 APBB1IPQ7Z5R6 666 aaPredicted RBP27.59■■■□□ 2.01
LSM7-201ENST00000252622 MRPS27Q92552 414 aaKnown RBP27.59■■■□□ 2.01
LSM7-201ENST00000252622 GAD1Q99259 594 aa27.59■■■□□ 2.01
LSM7-201ENST00000252622 APOL6Q9BWW8 343 aa27.59■■■□□ 2.01
LSM7-201ENST00000252622 PARVGQ9HBI0 331 aa27.59■■■□□ 2.01
LSM7-201ENST00000252622 COG5Q9UP83 839 aa27.59■■■□□ 2.01
LSM7-201ENST00000252622 TBCAO75347 108 aaKnown RBP27.58■■■□□ 2.01
LSM7-201ENST00000252622 FAM13AO94988 1023 aa27.58■■■□□ 2.01
LSM7-201ENST00000252622 MAPTP10636 758 aaKnown RBP27.58■■■□□ 2.01
LSM7-201ENST00000252622 SCP2P22307 547 aa27.58■■■□□ 2.01
LSM7-201ENST00000252622 MLH1P40692 756 aa27.58■■■□□ 2.01
LSM7-201ENST00000252622 NCKAP1LP55160 1127 aa27.58■■■□□ 2.01
LSM7-201ENST00000252622 REV3LO60673 3130 aa27.58■■■□□ 2.01
LSM7-201ENST00000252622 MYH11P35749 1972 aa27.57■■■□□ 2
LSM7-201ENST00000252622 A0A087X0B3 334 aa27.57■■■□□ 2
LSM7-201ENST00000252622 POMCP01189 267 aa27.57■■■□□ 2
LSM7-201ENST00000252622 AKAP5P24588 427 aa27.57■■■□□ 2
LSM7-201ENST00000252622 STAT6P42226 847 aa27.57■■■□□ 2
LSM7-201ENST00000252622 AXDND1Q5T1B0 1012 aaPredicted RBP27.57■■■□□ 2
LSM7-201ENST00000252622 SV2BQ7L1I2 683 aa27.57■■■□□ 2
LSM7-201ENST00000252622 ZNF280BQ86YH2 543 aa27.57■■■□□ 2
LSM7-201ENST00000252622 ATXN2LQ8WWM7 1075 aaKnown RBP27.57■■■□□ 2
LSM7-201ENST00000252622 ZFP42Q96MM3 310 aa27.57■■■□□ 2
LSM7-201ENST00000252622 ACO2Q99798 780 aaKnown RBP27.57■■■□□ 2
LSM7-201ENST00000252622 TMEM175Q9BSA9 504 aa27.57■■■□□ 2
LSM7-201ENST00000252622 TLR9Q9NR96 1032 aa27.57■■■□□ 2
LSM7-201ENST00000252622 PUF60Q9UHX1 559 aaKnown RBP27.57■■■□□ 2
LSM7-201ENST00000252622 B4GALT3O60512 393 aa27.56■■■□□ 2
LSM7-201ENST00000252622 GALTP07902 379 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms