RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 KRT35Q92764 455 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 HAS1Q92839 578 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 RMDN2Q96LZ7 410 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 REEP2Q9BRK0 252 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 TXLNGYQ9BZA5 131 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 CCDC134Q9H6E4 229 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 GON4LQ3T8J9 2241 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 COL1A1P02452 1464 aaPredicted RBP9.9□□□□□ -0.82
SRSF6-201ENST00000244020 USP17L15C9J2P7 530 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 USP17L13C9JLJ4 530 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 USP17L11C9JVI0 530 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 USP17L18D6R9N7 530 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 USP17L22D6RA61 530 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 USP17L17D6RBQ6 530 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 USP17L19D6RCP7 530 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 USP17L20D6RJB6 530 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 MAPK13O15264 365 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 TRPA1O75762 1119 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 RNF8O76064 485 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 CAMTA2O94983 1202 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 BCRP11274 1271 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 NT5C2P49902 561 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 PAPOLAP51003 745 aaKnown RBP9.9□□□□□ -0.82
SRSF6-201ENST00000244020 USP17L24Q0WX57 530 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 MKRN3Q13064 507 aaKnown RBP9.9□□□□□ -0.82
SRSF6-201ENST00000244020 TMEM154Q6P9G4 183 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 USP17L6PQ6QN14 398 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 ZC3H18Q86VM9 953 aaKnown RBP9.9□□□□□ -0.82
SRSF6-201ENST00000244020 PRELID2Q8N945 189 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 CCDC110Q8TBZ0 833 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 SLC35C1Q96A29 364 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 SERPINB12Q96P63 405 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 MXD3Q9BW11 206 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 BHMT2Q9H2M3 363 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 TAS2R14Q9NYV8 317 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 GLI3P10071 1580 aa9.9□□□□□ -0.82
SRSF6-201ENST00000244020 PITPNM2Q9BZ72 1349 aa9.9□□□□□ -0.83
SRSF6-201ENST00000244020 IGSF9BQ9UPX0 1349 aa9.9□□□□□ -0.83
SRSF6-201ENST00000244020 CTTNQ14247 550 aaKnown RBP9.9□□□□□ -0.83
SRSF6-201ENST00000244020 SGO2Q562F6 1265 aa9.9□□□□□ -0.83
SRSF6-201ENST00000244020 PPP1R21Q6ZMI0 780 aa9.9□□□□□ -0.83
SRSF6-201ENST00000244020 EPM2AIP1Q7L775 607 aaPredicted RBP9.9□□□□□ -0.83
SRSF6-201ENST00000244020 ANKRD35Q8N283 1001 aa9.9□□□□□ -0.83
SRSF6-201ENST00000244020 TBC1D16Q8TBP0 767 aa9.9□□□□□ -0.83
SRSF6-201ENST00000244020 C1orf54Q8WWF1 131 aa9.9□□□□□ -0.83
SRSF6-201ENST00000244020 CNKSR1Q969H4 720 aa9.9□□□□□ -0.83
SRSF6-201ENST00000244020 GRHL1Q9NZI5 618 aa9.9□□□□□ -0.83
SRSF6-201ENST00000244020 KCNG1Q9UIX4 513 aa9.9□□□□□ -0.83
SRSF6-201ENST00000244020 BCS1LQ9Y276 419 aa9.9□□□□□ -0.83
SRSF6-201ENST00000244020 RASA4BC9J798 803 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 RASA4O43374 803 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 DNAJC6O75061 913 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 MED24O75448 989 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 ATP5HO75947 161 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 UNC5CO95185 931 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 TRIM49P0CI25 452 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 TRIM49CP0CI26 452 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 COMTP21964 271 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 COILP38432 576 aaPredicted RBP9.89□□□□□ -0.83
SRSF6-201ENST00000244020 MRPS35P82673 323 aaKnown RBP9.89□□□□□ -0.83
SRSF6-201ENST00000244020 RNASELQ05823 741 aaKnown RBP9.89□□□□□ -0.83
SRSF6-201ENST00000244020 KLC1Q07866 573 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 TMED2Q15363 201 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 FYB2Q5VWT5 728 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 RNF207Q6ZRF8 634 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 TEKT4Q8WW24 435 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 NAP1L4Q99733 375 aaKnown RBP9.89□□□□□ -0.83
SRSF6-201ENST00000244020 ETAA1Q9NY74 926 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 MYH3P11055 1940 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 DPPA5A6NC42 116 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 EXOC3O60645 756 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 DLATP10515 647 aaKnown RBP9.89□□□□□ -0.83
SRSF6-201ENST00000244020 ALADP13716 330 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 PECAM1P16284 738 aaPredicted RBP9.89□□□□□ -0.83
SRSF6-201ENST00000244020 KRT15P19012 456 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 CALB2P22676 271 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 BTDP43251 543 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 MARCKSL1P49006 195 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 DEUP1Q05D60 604 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 CKAP2Q8WWK9 683 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 CNKSR2Q8WXI2 1034 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 PAIP2BQ9ULR5 123 aaKnown RBP9.89□□□□□ -0.83
SRSF6-201ENST00000244020 TRAF3IP3Q9Y228 551 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 CTDP1Q9Y5B0 961 aaPredicted RBP9.89□□□□□ -0.83
SRSF6-201ENST00000244020 FER1L4A9Z1Z3 1794 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 PFASO15067 1338 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 PNMA6FA0A0J9YX94 578 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 TTLL1O95922 423 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 ERFP50548 548 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 PSMC6P62333 389 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 GPC5P78333 572 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 KRT17Q04695 432 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 ASPRV1Q53RT3 343 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 HHATQ5VTY9 493 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 CDCA2Q69YH5 1023 aaPredicted RBP9.89□□□□□ -0.83
SRSF6-201ENST00000244020 CYP4F22Q6NT55 531 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 FAM43BQ6ZT52 329 aaPredicted RBP9.89□□□□□ -0.83
SRSF6-201ENST00000244020 TXNRD3Q86VQ6 643 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 PIP4K2CQ8TBX8 421 aa9.89□□□□□ -0.83
SRSF6-201ENST00000244020 FBXO41Q8TF61 875 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms