RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 NOP2P46087 812 aaKnown RBP18.25■□□□□ 0.51
GAPDH-201ENST00000229239 MXI1P50539 228 aa18.25■□□□□ 0.51
GAPDH-201ENST00000229239 GTF2A2P52657 109 aa18.25■□□□□ 0.51
GAPDH-201ENST00000229239 ACTR2P61160 394 aa18.25■□□□□ 0.51
GAPDH-201ENST00000229239 PPP3CAQ08209 521 aa18.25■□□□□ 0.51
GAPDH-201ENST00000229239 STXBP2Q15833 593 aa18.25■□□□□ 0.51
GAPDH-201ENST00000229239 XKR3Q5GH77 459 aa18.25■□□□□ 0.51
GAPDH-201ENST00000229239 OLIG1Q8TAK6 271 aa18.25■□□□□ 0.51
GAPDH-201ENST00000229239 LNX1Q8TBB1 728 aaPredicted RBP18.25■□□□□ 0.51
GAPDH-201ENST00000229239 U2AF1L4Q8WU68 220 aaKnown RBP18.25■□□□□ 0.51
GAPDH-201ENST00000229239 FAM81BQ96LP2 452 aa18.25■□□□□ 0.51
GAPDH-201ENST00000229239 ATP6V0A4Q9HBG4 840 aa18.25■□□□□ 0.51
GAPDH-201ENST00000229239 IGSF9BQ9UPX0 1349 aa18.25■□□□□ 0.51
GAPDH-201ENST00000229239 TMEM150BA6NC51 233 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 IGF2BP3O00425 579 aaKnown RBP eCLIP18.24■□□□□ 0.512e-7■■■□□ 16.7
GAPDH-201ENST00000229239 KIF4AO95239 1232 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 SUPT20HL2P0C7V6 817 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 TNFAIP3P21580 790 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 CLUL1Q15846 466 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 BRDTQ58F21 947 aaPredicted RBP18.24■□□□□ 0.51
GAPDH-201ENST00000229239 C1orf220Q5T0J3 134 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 SWSAP1Q6NVH7 229 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.24■□□□□ 0.514e-10■■■□□ 19.2
GAPDH-201ENST00000229239 RFFLQ8WZ73 363 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 FBXL18Q96ME1 805 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 SUCLA2Q9P2R7 463 aaPredicted RBP18.24■□□□□ 0.51
GAPDH-201ENST00000229239 DIS3Q9Y2L1 958 aaKnown RBP18.24■□□□□ 0.51
GAPDH-201ENST00000229239 A0A0U1RQG5 324 aaPredicted RBP18.24■□□□□ 0.51
GAPDH-201ENST00000229239 DENND3A2RUS2 1198 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 KIAA0391O15091 583 aaKnown RBP18.24■□□□□ 0.51
GAPDH-201ENST00000229239 GARTP22102 1010 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 CNGA1P29973 690 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 AARSP49588 968 aaKnown RBP eCLIP18.24■□□□□ 0.51
GAPDH-201ENST00000229239 DLG4P78352 724 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 PPATQ06203 517 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 SNRNP35Q16560 246 aaKnown RBP18.24■□□□□ 0.51
GAPDH-201ENST00000229239 C8orf74Q6P047 294 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 LBX2Q6XYB7 198 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 ACTRT1Q8TDG2 376 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 IFT74Q96LB3 600 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 PSMB7Q99436 277 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 PTPN18Q99952 460 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 LRRC1Q9BTT6 524 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 CYP26B1Q9NR63 512 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 RNF216Q9NWF9 866 aaPredicted RBP18.24■□□□□ 0.51
GAPDH-201ENST00000229239 STIM2Q9P246 746 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 COQ4Q9Y3A0 265 aa18.24■□□□□ 0.51
GAPDH-201ENST00000229239 IRF6O14896 467 aa18.23■□□□□ 0.51
GAPDH-201ENST00000229239 ATG7O95352 703 aa18.23■□□□□ 0.51
GAPDH-201ENST00000229239 GALCP54803 685 aa18.23■□□□□ 0.51
GAPDH-201ENST00000229239 TNNC1P63316 161 aa18.23■□□□□ 0.51
GAPDH-201ENST00000229239 PRKCEQ02156 737 aa18.23■□□□□ 0.51
GAPDH-201ENST00000229239 TCEAL1Q15170 157 aa18.23■□□□□ 0.51
GAPDH-201ENST00000229239 KRT39Q6A163 491 aa18.23■□□□□ 0.51
GAPDH-201ENST00000229239 RIOX2Q8IUF8 465 aa18.23■□□□□ 0.51
GAPDH-201ENST00000229239 EIF1ADQ8N9N8 165 aaKnown RBP18.23■□□□□ 0.51
GAPDH-201ENST00000229239 FAM71BQ8TC56 605 aa18.23■□□□□ 0.51
GAPDH-201ENST00000229239 CTNNBL1Q8WYA6 563 aaPredicted RBP18.23■□□□□ 0.51
GAPDH-201ENST00000229239 MFSD14AQ96MC6 490 aa18.23■□□□□ 0.51
GAPDH-201ENST00000229239 CFHR5Q9BXR6 569 aa18.23■□□□□ 0.51
GAPDH-201ENST00000229239 TMEM117Q9H0C3 514 aa18.23■□□□□ 0.51
GAPDH-201ENST00000229239 KIAA1586Q9HCI6 787 aa18.23■□□□□ 0.51
GAPDH-201ENST00000229239 TMEM8AQ9HCN3 771 aa18.23■□□□□ 0.51
GAPDH-201ENST00000229239 ST7Q9NRC1 585 aa18.23■□□□□ 0.51
GAPDH-201ENST00000229239 CCL15-CCL14A0A0B4J2E2 113 aa18.22■□□□□ 0.51
GAPDH-201ENST00000229239 TISP43B9A030 160 aa18.22■□□□□ 0.51
GAPDH-201ENST00000229239 ADSSP30520 456 aa18.22■□□□□ 0.51
GAPDH-201ENST00000229239 GCLMP48507 274 aa18.22■□□□□ 0.51
GAPDH-201ENST00000229239 PPIL2Q13356 520 aa18.22■□□□□ 0.51
GAPDH-201ENST00000229239 NNTQ13423 1086 aa18.22■□□□□ 0.51
GAPDH-201ENST00000229239 CCL15Q16663 113 aa18.22■□□□□ 0.51
GAPDH-201ENST00000229239 EMBQ6PCB8 327 aa18.22■□□□□ 0.51
GAPDH-201ENST00000229239 GLYCTKQ8IVS8 523 aa18.22■□□□□ 0.51
GAPDH-201ENST00000229239 IFT20Q8IY31 132 aa18.22■□□□□ 0.51
GAPDH-201ENST00000229239 AENQ8WTP8 325 aaKnown RBP18.22■□□□□ 0.51
GAPDH-201ENST00000229239 BRI3BPQ8WY22 251 aa18.22■□□□□ 0.51
GAPDH-201ENST00000229239 AGPAT1Q99943 283 aa18.22■□□□□ 0.51
GAPDH-201ENST00000229239 SH2D3AQ9BRG2 576 aa18.22■□□□□ 0.51
GAPDH-201ENST00000229239 UBE2TQ9NPD8 197 aaPredicted RBP18.22■□□□□ 0.51
GAPDH-201ENST00000229239 STXBP5LQ9Y2K9 1186 aa18.22■□□□□ 0.51
GAPDH-201ENST00000229239 ANKRD62A6NC57 917 aa18.22■□□□□ 0.51
GAPDH-201ENST00000229239 FOXN3O00409 490 aaPredicted RBP18.22■□□□□ 0.51
GAPDH-201ENST00000229239 HADHBP55084 474 aaKnown RBP18.22■□□□□ 0.51
GAPDH-201ENST00000229239 PEX26Q7Z412 305 aa18.22■□□□□ 0.51
GAPDH-201ENST00000229239 CCDC60Q8IWA6 550 aaPredicted RBP18.22■□□□□ 0.51
GAPDH-201ENST00000229239 PARD3BQ8TEW8 1205 aa18.22■□□□□ 0.51
GAPDH-201ENST00000229239 PDE11AQ9HCR9 933 aa18.22■□□□□ 0.51
GAPDH-201ENST00000229239 RBM12Q9NTZ6 932 aaKnown RBP18.22■□□□□ 0.51
GAPDH-201ENST00000229239 PSD3Q9NYI0 1048 aa18.22■□□□□ 0.51
GAPDH-201ENST00000229239 ARHGAP28Q9P2N2 729 aa18.22■□□□□ 0.51
GAPDH-201ENST00000229239 SEPT9Q9UHD8 586 aaPredicted RBP18.22■□□□□ 0.51
GAPDH-201ENST00000229239 MAFBQ9Y5Q3 323 aaPredicted RBP18.22■□□□□ 0.51
GAPDH-201ENST00000229239 A0A0G2JMZ2 1700 aa18.21■□□□□ 0.51
GAPDH-201ENST00000229239 ANKRD63C9JTQ0 380 aa18.21■□□□□ 0.51
GAPDH-201ENST00000229239 CAPN15O75808 1086 aa18.21■□□□□ 0.51
GAPDH-201ENST00000229239 ADRB2P07550 413 aa18.21■□□□□ 0.51
GAPDH-201ENST00000229239 CETPP11597 493 aa18.21■□□□□ 0.51
GAPDH-201ENST00000229239 GPC3P51654 580 aa18.21■□□□□ 0.51
GAPDH-201ENST00000229239 EPHB4P54760 987 aa18.21■□□□□ 0.51
GAPDH-201ENST00000229239 MFAP3P55082 362 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms