RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 APOL6Q9BWW8 343 aa14.67□□□□□ -0.06
NFKB1-201ENST00000226574 ACP6Q9NPH0 428 aa14.67□□□□□ -0.06
NFKB1-201ENST00000226574 FIS1Q9Y3D6 152 aa14.67□□□□□ -0.06
NFKB1-201ENST00000226574 FANCGO15287 622 aa14.67□□□□□ -0.06
NFKB1-201ENST00000226574 KLRC4O43908 158 aa14.67□□□□□ -0.06
NFKB1-201ENST00000226574 AMPD2Q01433 879 aa14.67□□□□□ -0.06
NFKB1-201ENST00000226574 LRRC36Q1X8D7 754 aa14.67□□□□□ -0.06
NFKB1-201ENST00000226574 CEP55Q53EZ4 464 aa14.67□□□□□ -0.06
NFKB1-201ENST00000226574 ZNF507Q8TCN5 953 aa14.67□□□□□ -0.06
NFKB1-201ENST00000226574 AENQ8WTP8 325 aaKnown RBP14.67□□□□□ -0.06
NFKB1-201ENST00000226574 OSBPL1AQ9BXW6 950 aa14.67□□□□□ -0.06
NFKB1-201ENST00000226574 MYO3BQ8WXR4 1341 aa14.67□□□□□ -0.06
NFKB1-201ENST00000226574 FAM187AA6NFU0 413 aa14.67□□□□□ -0.06
NFKB1-201ENST00000226574 IGF2BP3O00425 579 aaKnown RBP eCLIP14.67□□□□□ -0.06
NFKB1-201ENST00000226574 FXR2P51116 673 aaKnown RBP eCLIP14.67□□□□□ -0.06
NFKB1-201ENST00000226574 IFI35P80217 286 aaPredicted RBP14.67□□□□□ -0.06
NFKB1-201ENST00000226574 CENPUQ71F23 418 aa14.67□□□□□ -0.06
NFKB1-201ENST00000226574 IKZF4Q9H2S9 585 aa14.67□□□□□ -0.06
NFKB1-201ENST00000226574 FBXO28Q9NVF7 368 aa14.67□□□□□ -0.06
NFKB1-201ENST00000226574 MARCOQ9UEW3 520 aaPredicted RBP14.67□□□□□ -0.06
NFKB1-201ENST00000226574 SUFUQ9UMX1 484 aa14.67□□□□□ -0.06
NFKB1-201ENST00000226574 POLR2BP30876 1174 aaKnown RBP14.66□□□□□ -0.06
NFKB1-201ENST00000226574 EPHB1P54762 984 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 PLA2G4FQ68DD2 849 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 PPM1NQ8N819 430 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 NSMCE1Q8WV22 266 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 CCDC124Q96CT7 223 aaKnown RBP14.66□□□□□ -0.06
NFKB1-201ENST00000226574 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.66□□□□□ -0.06
NFKB1-201ENST00000226574 KNDC1Q76NI1 1749 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 ZNF263O14978 683 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 TMPRSS15P98073 1019 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 LRP10Q7Z4F1 713 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 CCNYQ8ND76 341 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 GSDMBQ8TAX9 411 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 SLC20A1Q8WUM9 679 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 ATP2A3Q93084 1043 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 RBM15Q96T37 977 aaKnown RBP eCLIP14.66□□□□□ -0.06
NFKB1-201ENST00000226574 GPRC5CQ9NQ84 441 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 PPP1R9AQ9ULJ8 1098 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 JCADQ9P266 1359 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 NCF2P19878 526 aaPredicted RBP14.66□□□□□ -0.06
NFKB1-201ENST00000226574 LMNB2Q03252 620 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 MEA1Q16626 185 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 EDRF1Q3B7T1 1238 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 FIGNQ5HY92 759 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 KRT39Q6A163 491 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 SMC1BQ8NDV3 1235 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 ATP6V0A1Q93050 837 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 IFT122Q9HBG6 1241 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 USP15Q9Y4E8 981 aaPredicted RBP14.66□□□□□ -0.06
NFKB1-201ENST00000226574 CFLARO15519 480 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 C21orf2O43822 256 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 ARSEP51690 589 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 IFRD2Q12894 506 aaPredicted RBP14.66□□□□□ -0.06
NFKB1-201ENST00000226574 MEI1Q5TIA1 1274 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 ERICH1Q86X53 443 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 MCF2L2Q86YR7 1114 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 GBP7Q8N8V2 638 aaPredicted RBP14.66□□□□□ -0.06
NFKB1-201ENST00000226574 NLRP4Q96MN2 994 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 POP1Q99575 1024 aaKnown RBP14.66□□□□□ -0.06
NFKB1-201ENST00000226574 MSTO1Q9BUK6 570 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 DDX20Q9UHI6 824 aaKnown RBP14.66□□□□□ -0.06
NFKB1-201ENST00000226574 ZFP69BQ9UJL9 534 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 INPP5FQ9Y2H2 1132 aa14.66□□□□□ -0.06
NFKB1-201ENST00000226574 VIRMAQ69YN4 1812 aaKnown RBP14.65□□□□□ -0.06
NFKB1-201ENST00000226574 HSPA9P38646 679 aaKnown RBP14.65□□□□□ -0.06
NFKB1-201ENST00000226574 SCTRP47872 440 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 OR6B2Q6IFH4 312 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 SWSAP1Q6NVH7 229 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 SYT2Q8N9I0 419 aaPredicted RBP14.65□□□□□ -0.06
NFKB1-201ENST00000226574 SLC17A8Q8NDX2 589 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 TMBIM4Q9HC24 238 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 NOD2Q9HC29 1040 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 NPHS2Q9NP85 383 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 NDC80O14777 642 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 TRPA1O75762 1119 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 PSMA2P25787 234 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 RPA1P27694 616 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 CASP5P51878 434 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 DHX34Q14147 1143 aaKnown RBP14.65□□□□□ -0.06
NFKB1-201ENST00000226574 MIIPQ5JXC2 388 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 CDC42EP5Q6NZY7 148 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 AGR3Q8TD06 166 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 TRIM4Q9C037 500 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 MCF2LO15068 1137 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 TNNC2P02585 160 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 QARSP47897 775 aaKnown RBP14.65□□□□□ -0.06
NFKB1-201ENST00000226574 OVGP1Q12889 678 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 CAPRIN2Q6IMN6 1127 aaKnown RBP14.65□□□□□ -0.06
NFKB1-201ENST00000226574 SULF1Q8IWU6 871 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 MIPOL1Q8TD10 442 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 PPP4R1Q8TF05 950 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 CYP4F11Q9HBI6 524 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 GABBR1Q9UBS5 961 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 USP20Q9Y2K6 914 aa14.65□□□□□ -0.06
NFKB1-201ENST00000226574 MAP3K6O95382 1288 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 PRLRP16471 622 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 PBX1P40424 430 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 CPA2P48052 419 aa14.64□□□□□ -0.07
NFKB1-201ENST00000226574 NIM1KQ8IY84 436 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms