RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 PLAGL2Q9UPG8 496 aa12.96□□□□□ -0.34
TSPAN9-201ENST00000011898 TAF1P21675 1872 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 NOP56O00567 594 aaKnown RBP12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 LACRTQ9GZZ8 138 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 SATB2Q9UPW6 733 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 GINS2Q9Y248 185 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 FAM205AQ6ZU69 1335 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 ECEL1O95672 775 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 BMP6P22004 513 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 EIF3BP55884 814 aaKnown RBP12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 MKRN3Q13064 507 aaKnown RBP12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 SLC18A3Q16572 532 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 PTGISQ16647 500 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 PREPLQ4J6C6 727 aaPredicted RBP12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 ERGIC2Q96RQ1 377 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 RAB20Q9NX57 234 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 RNF181Q9P0P0 153 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 NUB1Q9Y5A7 615 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 FLT1P17948 1338 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 GOLGA8IPA6NC78 632 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 LRRIQ4A6NIV6 560 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 GOLGA8JA6NMD2 632 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 PLEKP08567 350 aaPredicted RBP12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 CRKP46108 304 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 NT5DC1Q5TFE4 455 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 KRT80Q6KB66 452 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 GLYCTKQ8IVS8 523 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 RHOT2Q8IXI1 618 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 TAF1DQ9H5J8 278 aaPredicted RBP12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 AZI2Q9H6S1 392 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 ZNRF3Q9ULT6 936 aa12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.95□□□□□ -0.34
TSPAN9-201ENST00000011898 UBTFL6P0CB48 400 aaPredicted RBP12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 USP11P51784 963 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 ZNF543Q08ER8 600 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 PLCB4Q15147 1175 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 ANKRD31Q8N7Z5 1873 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 NPHP3-ACAD11A0A0J9YXS1 232 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 WDR91A4D1P6 747 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 MYBL2P10244 700 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 PHBP35232 272 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 PTGER2P43116 358 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 BPIFB4P59827 614 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 MRPS9P82933 396 aaKnown RBP12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 CIAPIN1Q6FI81 312 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 CYP4F22Q6NT55 531 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 PDXDC2PQ6P474 469 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 TRIM42Q8IWZ5 723 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 DCAF4Q8WV16 495 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 GLG1Q92896 1179 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 A0A087X0B3 334 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 ABCD1P33897 745 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 SKOR1P84550 965 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 RNASELQ05823 741 aaKnown RBP12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 ZNF211Q13398 564 aaPredicted RBP12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 DRAP1Q14919 205 aaPredicted RBP12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 MIGA2Q7L4E1 593 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 NUDCD3Q8IVD9 361 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 TAB3Q8N5C8 712 aaPredicted RBP12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 DCPSQ96C86 337 aaKnown RBP12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 CEP170P1Q96L14 293 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 LRRC37BQ96QE4 947 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 TDRD3Q9H7E2 651 aaKnown RBP12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 KBTBD4Q9NVX7 518 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 UBAP1Q9NZ09 502 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 AMACRQ9UHK6 382 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 CCT8L1PA6NM43 557 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 NVLO15381 856 aaKnown RBP12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 PECAM1P16284 738 aaPredicted RBP12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 STMN1P16949 149 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 GCLMP48507 274 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 TBX2Q13207 712 aaPredicted RBP12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 TTI2Q6NXR4 508 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 CTAGE3PQ8IX95 158 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 KIAA2013Q8IYS2 634 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 KMT5AQ9NQR1 393 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 MAD2L2Q9UI95 211 aa12.94□□□□□ -0.34
TSPAN9-201ENST00000011898 SART1O43290 800 aaKnown RBP12.93□□□□□ -0.34
TSPAN9-201ENST00000011898 S100BP04271 92 aaPredicted RBP12.93□□□□□ -0.34
TSPAN9-201ENST00000011898 ANKRD35Q8N283 1001 aa12.93□□□□□ -0.34
TSPAN9-201ENST00000011898 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.93□□□□□ -0.344e-6■■■■□ 20.4
TSPAN9-201ENST00000011898 RBM12Q9NTZ6 932 aaKnown RBP12.93□□□□□ -0.34
TSPAN9-201ENST00000011898 IGF2BP3O00425 579 aaKnown RBP eCLIP12.93□□□□□ -0.34
TSPAN9-201ENST00000011898 KDM1AO60341 852 aa12.93□□□□□ -0.34
TSPAN9-201ENST00000011898 SCTRP47872 440 aa12.93□□□□□ -0.34
TSPAN9-201ENST00000011898 PEX3P56589 373 aa12.93□□□□□ -0.34
TSPAN9-201ENST00000011898 CYLC2Q14093 348 aaPredicted RBP12.93□□□□□ -0.34
TSPAN9-201ENST00000011898 RSRC2Q7L4I2 434 aaKnown RBP12.93□□□□□ -0.34
TSPAN9-201ENST00000011898 PALM2Q8IXS6 379 aa12.93□□□□□ -0.34
TSPAN9-201ENST00000011898 ARL8AQ96BM9 186 aa12.93□□□□□ -0.34
TSPAN9-201ENST00000011898 NAF1Q96HR8 494 aaKnown RBP12.93□□□□□ -0.34
TSPAN9-201ENST00000011898 ZIM3Q96PE6 472 aa12.93□□□□□ -0.34
TSPAN9-201ENST00000011898 ANKFY1Q9P2R3 1169 aa12.93□□□□□ -0.34
TSPAN9-201ENST00000011898 BCAP29Q9UHQ4 241 aa12.93□□□□□ -0.34
TSPAN9-201ENST00000011898 DAGLAQ9Y4D2 1042 aa12.93□□□□□ -0.34
TSPAN9-201ENST00000011898 ARHGAP10A1A4S6 786 aa12.93□□□□□ -0.34
TSPAN9-201ENST00000011898 GRID2IPA4D2P6 1211 aa12.93□□□□□ -0.34
TSPAN9-201ENST00000011898 SPAG7O75391 227 aa12.93□□□□□ -0.34
TSPAN9-201ENST00000011898 POLGP54098 1239 aaPredicted RBP12.93□□□□□ -0.34
TSPAN9-201ENST00000011898 TNFAIP1Q13829 316 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms