RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Gucy1a2F8VQK3 730 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Aco1P28271 889 aaKnown RBP9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 D630036H23RikQ3UQD6 204 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Ccdc84Q4VA36 332 aaKnown RBP9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Pacsin1Q61644 441 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Herc4Q6PAV2 1057 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Kcnv2Q8CFS6 562 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Snrnp27Q8K194 155 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Rev1Q920Q2 1249 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Wbp11Q923D5 641 aaKnown RBP9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Batf3Q9D275 118 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Rabl3Q9D4V7 236 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Myo1hQ9D6A1 958 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Plod1Q9R0E2 728 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 S1pr4Q9Z0L1 386 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Nwd2Q6P5U7 1742 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Gm11985A0A1B0GS61 206 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Patl2A2ARM1 529 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Gimd1E9PW74 217 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Cyp2d9P11714 504 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Lig1P37913 916 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Fen1P39749 378 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 IvlP48997 467 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Olfm3P63056 478 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Rbm46P86049 533 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Gm14685Q52KH6 695 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Kctd19Q562E2 927 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Ppp1r13bQ62415 1087 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Churc1Q6DG52 112 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 DaglaQ6WQJ1 1044 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 PhkbQ7TSH2 1085 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Chn2Q80XD1 332 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Gcfc2Q8BKT3 769 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Setdb2Q8C267 713 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Chn1Q91V57 459 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Kctd10Q922M3 315 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Frmpd4A2AFR3 1320 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Gm379J3QQ19 296 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Cbfa2t2O70374 594 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Idh1O88844 414 aaKnown RBP9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 MybP06876 636 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Psmc2P46471 433 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Mark3Q03141 753 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Q14AM7 275 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Xxylt1Q3U4G3 392 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Klrg2Q3UM83 387 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Pnma5Q5DTT8 618 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Camkk2Q8C078 588 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 AacsQ9D2R0 672 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Nr2e3Q9QXZ7 395 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Thsd7aQ69ZU6 1645 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Ssc5dQ8BV57 1371 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Aknad1E9Q8N6 675 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Gm5134E9QAB5 671 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Slc39a2G3X943 309 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Lrrc32G3XA59 663 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Ap1b1O35643 943 aaKnown RBP9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Krt18P05784 423 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Myl1P05977 188 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 CatspereP0DP43 985 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 OatP29758 439 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Msh2P43247 935 aaKnown RBP9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Bend4P86174 541 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Dpcr1Q3TNW5 500 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Rufy4Q3TYX8 563 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Esyt2Q3TZZ7 845 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Gm5168Q4KL04 211 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Fam71bQ5STT6 665 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Adgrg6Q6F3F9 1165 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Nap1l4Q78ZA7 375 aaKnown RBP9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Nucks1Q80XU3 234 aaKnown RBP9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Nim1kQ8BHI9 436 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Atad3Q925I1 591 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Sytl1Q99N80 567 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Wars2Q9CYK1 360 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Cmtr1Q9DBC3 837 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Rab27aQ9ERI2 221 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Ndufa13Q9ERS2 144 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Tmed2Q9R0Q3 201 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Nfs1Q9Z1J3 459 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Zfp142G5E869 1843 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Map2P20357 1828 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Sipa1l1Q8C0T5 1782 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Pdia2D3Z6P0 527 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Pgrmc1O55022 195 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 FosP01101 380 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Bmp2P21274 394 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Tnni3P48787 211 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Mier3Q3UHF3 551 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Zbtb16Q3UQ17 673 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 CpQ61147 1061 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 PodnQ7TQ62 611 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Trim9Q8C7M3 817 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 C130026I21RikQ8C898 291 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Rsad2Q8CBB9 362 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Stoml1Q8CI66 399 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 HlcsQ920N2 722 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Txndc9Q9CQ79 226 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Syap1Q9D5V6 365 aa9.41□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Q9DAQ4 598 aa9.41□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms