RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 SEC24CP53992 1094 aa13.36□□□□□ -0.27
SPIN3-236ENST00000640131 SP4Q02446 784 aa13.36□□□□□ -0.27
SPIN3-236ENST00000640131 COBLL1Q53SF7 1204 aa13.36□□□□□ -0.27
SPIN3-236ENST00000640131 TRAPPC11Q7Z392 1133 aa13.36□□□□□ -0.27
SPIN3-236ENST00000640131 TRIM59Q8IWR1 403 aa13.36□□□□□ -0.27
SPIN3-236ENST00000640131 MYCBPAPQ8TBZ2 947 aa13.36□□□□□ -0.27
SPIN3-236ENST00000640131 WNK4Q96J92 1243 aa13.36□□□□□ -0.27
SPIN3-236ENST00000640131 MYOZ2Q9NPC6 264 aa13.36□□□□□ -0.27
SPIN3-236ENST00000640131 SLC5A4Q9NY91 659 aa13.36□□□□□ -0.27
SPIN3-236ENST00000640131 ADAMTS1Q9UHI8 967 aa13.36□□□□□ -0.27
SPIN3-236ENST00000640131 AJAP1Q9UKB5 411 aaPredicted RBP13.36□□□□□ -0.27
SPIN3-236ENST00000640131 MYH11P35749 1972 aa13.36□□□□□ -0.27
SPIN3-236ENST00000640131 LRRD1A4D1F6 860 aa13.36□□□□□ -0.27
SPIN3-236ENST00000640131 ABL2P42684 1182 aa13.36□□□□□ -0.27
SPIN3-236ENST00000640131 KNOP1Q1ED39 458 aaKnown RBP13.36□□□□□ -0.27
SPIN3-236ENST00000640131 HIBCHQ6NVY1 386 aaPredicted RBP13.36□□□□□ -0.27
SPIN3-236ENST00000640131 C10orf71Q711Q0 1435 aa13.36□□□□□ -0.27
SPIN3-236ENST00000640131 NPM3O75607 178 aaKnown RBP13.36□□□□□ -0.27
SPIN3-236ENST00000640131 KCNA4P22459 653 aa13.36□□□□□ -0.27
SPIN3-236ENST00000640131 CEP55Q53EZ4 464 aa13.36□□□□□ -0.27
SPIN3-236ENST00000640131 TMEM110Q86TL2 294 aa13.36□□□□□ -0.27
SPIN3-236ENST00000640131 CHURC1Q8WUH1 139 aa13.36□□□□□ -0.27
SPIN3-236ENST00000640131 FAM20AQ96MK3 541 aa13.36□□□□□ -0.27
SPIN3-236ENST00000640131 WDR35Q9P2L0 1181 aa13.36□□□□□ -0.27
SPIN3-236ENST00000640131 ARMCX3Q9UH62 379 aaPredicted RBP13.36□□□□□ -0.27
SPIN3-236ENST00000640131 A0A1W2PQJ5 194 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 E2F6O75461 281 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 FLOT1O75955 427 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 NR3C1P04150 777 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 HMGB2P26583 209 aaKnown RBP13.35□□□□□ -0.27
SPIN3-236ENST00000640131 INHBCP55103 352 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 GUCY1A3Q02108 690 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 DYNC1I2Q13409 638 aaKnown RBP13.35□□□□□ -0.27
SPIN3-236ENST00000640131 PTGISQ16647 500 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 HGSNATQ68CP4 663 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 CCHCR1Q8TD31 782 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 RUFY1Q96T51 708 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 ZWILCHQ9H900 591 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 PHF24Q9UPV7 400 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 ASTN1O14525 1302 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 IPO5O00410 1097 aaKnown RBP13.35□□□□□ -0.27
SPIN3-236ENST00000640131 FTCDO95954 541 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 TRIM49P0CI25 452 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 TRIM49CP0CI26 452 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 DESP17661 470 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 ITGB5P18084 799 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 ALDH3A1P30838 453 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 MTMR2Q13614 643 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 CCDC38Q502W7 563 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 DLK2Q6UY11 383 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 NSMFQ6X4W1 530 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 ARL8AQ96BM9 186 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 MS4A14Q96JA4 679 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 LXNQ9BS40 222 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 PCIF1Q9H4Z3 704 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 GALNT8Q9NY28 637 aa13.35□□□□□ -0.27
SPIN3-236ENST00000640131 A0A087X0T9 212 aa13.34□□□□□ -0.27
SPIN3-236ENST00000640131 PSMD10O75832 226 aa13.34□□□□□ -0.27
SPIN3-236ENST00000640131 FAM228BP0C875 321 aa13.34□□□□□ -0.27
SPIN3-236ENST00000640131 RPL13P26373 211 aaKnown RBP13.34□□□□□ -0.27
SPIN3-236ENST00000640131 CIAPIN1Q6FI81 312 aa13.34□□□□□ -0.27
SPIN3-236ENST00000640131 JDP2Q8WYK2 163 aa13.34□□□□□ -0.27
SPIN3-236ENST00000640131 ELMO3Q96BJ8 720 aa13.34□□□□□ -0.27
SPIN3-236ENST00000640131 SH2D4AQ9H788 454 aa13.34□□□□□ -0.27
SPIN3-236ENST00000640131 TMEM98Q9Y2Y6 226 aa13.34□□□□□ -0.27
SPIN3-236ENST00000640131 PEX10O60683 326 aa13.34□□□□□ -0.27
SPIN3-236ENST00000640131 USO1O60763 962 aaKnown RBP13.34□□□□□ -0.27
SPIN3-236ENST00000640131 LGR5O75473 907 aa13.34□□□□□ -0.27
SPIN3-236ENST00000640131 EYA4O95677 639 aa13.34□□□□□ -0.27
SPIN3-236ENST00000640131 CNGA1P29973 690 aa13.34□□□□□ -0.27
SPIN3-236ENST00000640131 CIITAP33076 1130 aa13.34□□□□□ -0.27
SPIN3-236ENST00000640131 POLE2P56282 527 aa13.34□□□□□ -0.27
SPIN3-236ENST00000640131 SLC7A5Q01650 507 aa13.34□□□□□ -0.27
SPIN3-236ENST00000640131 KLHL30Q0D2K2 578 aa13.34□□□□□ -0.27
SPIN3-236ENST00000640131 PPP1R7Q15435 360 aa13.34□□□□□ -0.27
SPIN3-236ENST00000640131 TTMPQ5BVD1 217 aa13.34□□□□□ -0.27
SPIN3-236ENST00000640131 MOXD1Q6UVY6 613 aa13.34□□□□□ -0.27
SPIN3-236ENST00000640131 FAM81BQ96LP2 452 aa13.34□□□□□ -0.27
SPIN3-236ENST00000640131 HSD17B14Q9BPX1 270 aa13.34□□□□□ -0.27
SPIN3-236ENST00000640131 PREBQ9HCU5 417 aa13.34□□□□□ -0.27
SPIN3-236ENST00000640131 MRPL11Q9Y3B7 192 aaKnown RBP13.34□□□□□ -0.27
SPIN3-236ENST00000640131 SPDYE5A6NIY4 337 aa13.33□□□□□ -0.27
SPIN3-236ENST00000640131 TBX3O15119 743 aa13.33□□□□□ -0.27
SPIN3-236ENST00000640131 MAP3K13O43283 966 aa13.33□□□□□ -0.27
SPIN3-236ENST00000640131 PPP1R37O75864 691 aa13.33□□□□□ -0.27
SPIN3-236ENST00000640131 FAM107AO95990 144 aa13.33□□□□□ -0.27
SPIN3-236ENST00000640131 XRCC5P13010 732 aaKnown RBP13.33□□□□□ -0.27
SPIN3-236ENST00000640131 PRELPP51888 382 aa13.33□□□□□ -0.27
SPIN3-236ENST00000640131 SLC9C1Q4G0N8 1177 aa13.33□□□□□ -0.27
SPIN3-236ENST00000640131 FIGNQ5HY92 759 aa13.33□□□□□ -0.27
SPIN3-236ENST00000640131 ODR4Q5SWX8 454 aa13.33□□□□□ -0.27
SPIN3-236ENST00000640131 RNF168Q8IYW5 571 aaPredicted RBP13.33□□□□□ -0.27
SPIN3-236ENST00000640131 SH2D3CQ8N5H7 860 aa13.33□□□□□ -0.27
SPIN3-236ENST00000640131 MAIP1Q8WWC4 291 aa13.33□□□□□ -0.27
SPIN3-236ENST00000640131 RNPC3Q96LT9 517 aaKnown RBP13.33□□□□□ -0.27
SPIN3-236ENST00000640131 E7EVH7 732 aa13.33□□□□□ -0.28
SPIN3-236ENST00000640131 LRRN2O75325 713 aa13.33□□□□□ -0.28
SPIN3-236ENST00000640131 NBPF12Q5TAG4 269 aaPredicted RBP13.33□□□□□ -0.28
SPIN3-236ENST00000640131 EXOC8Q8IYI6 725 aa13.33□□□□□ -0.28
SPIN3-236ENST00000640131 L3MBTL3Q96JM7 780 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms