RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 JRKLQ9Y4A0 524 aa20.34■□□□□ 0.85
CLN5-219ENST00000637537 SAR1BQ9Y6B6 198 aa20.34■□□□□ 0.85
CLN5-219ENST00000637537 IGSF9BQ9UPX0 1349 aa20.34■□□□□ 0.85
CLN5-219ENST00000637537 DGAT1O75907 488 aa20.34■□□□□ 0.85
CLN5-219ENST00000637537 VAMP7P51809 220 aa20.34■□□□□ 0.85
CLN5-219ENST00000637537 NAP1L1P55209 391 aaKnown RBP20.34■□□□□ 0.85
CLN5-219ENST00000637537 CEP112Q8N8E3 955 aa20.34■□□□□ 0.85
CLN5-219ENST00000637537 KIFAP3Q92845 792 aa20.34■□□□□ 0.85
CLN5-219ENST00000637537 PSMB7Q99436 277 aa20.34■□□□□ 0.85
CLN5-219ENST00000637537 INTS2Q9H0H0 1204 aaKnown RBP20.34■□□□□ 0.85
CLN5-219ENST00000637537 FAN1Q9Y2M0 1017 aa20.34■□□□□ 0.85
CLN5-219ENST00000637537 CENPFP49454 3210 aa20.34■□□□□ 0.85
CLN5-219ENST00000637537 GLTPD2A6NH11 291 aa20.33■□□□□ 0.85
CLN5-219ENST00000637537 N4BP1O75113 896 aaKnown RBP20.33■□□□□ 0.85
CLN5-219ENST00000637537 ADRB2P07550 413 aa20.33■□□□□ 0.85
CLN5-219ENST00000637537 CYP2C8P10632 490 aa20.33■□□□□ 0.85
CLN5-219ENST00000637537 CORO7P57737 925 aa20.33■□□□□ 0.85
CLN5-219ENST00000637537 MKRN3Q13064 507 aaKnown RBP20.33■□□□□ 0.85
CLN5-219ENST00000637537 C1orf220Q5T0J3 134 aa20.33■□□□□ 0.85
CLN5-219ENST00000637537 POLR3FQ9H1D9 316 aaPredicted RBP20.33■□□□□ 0.85
CLN5-219ENST00000637537 DNAJC12Q9UKB3 198 aa20.33■□□□□ 0.85
CLN5-219ENST00000637537 FARP2O94887 1054 aaPredicted RBP20.33■□□□□ 0.84
CLN5-219ENST00000637537 EDNRBP24530 442 aa20.33■□□□□ 0.84
CLN5-219ENST00000637537 XKR3Q5GH77 459 aa20.33■□□□□ 0.84
CLN5-219ENST00000637537 PAPD7Q5XG87 772 aaKnown RBP20.33■□□□□ 0.84
CLN5-219ENST00000637537 SLC39A4Q6P5W5 647 aa20.33■□□□□ 0.84
CLN5-219ENST00000637537 INTS8Q75QN2 995 aaKnown RBP20.33■□□□□ 0.84
CLN5-219ENST00000637537 MAP4K3Q8IVH8 894 aa20.33■□□□□ 0.84
CLN5-219ENST00000637537 PNKPQ96T60 521 aa20.33■□□□□ 0.84
CLN5-219ENST00000637537 ATP6V0A4Q9HBG4 840 aa20.33■□□□□ 0.84
CLN5-219ENST00000637537 MAFBQ9Y5Q3 323 aaPredicted RBP20.33■□□□□ 0.84
CLN5-219ENST00000637537 DKC1O60832 514 aaKnown RBP eCLIP20.32■□□□□ 0.84
CLN5-219ENST00000637537 ERLIN1O75477 346 aa20.32■□□□□ 0.84
CLN5-219ENST00000637537 KLRC1P26715 233 aa20.32■□□□□ 0.84
CLN5-219ENST00000637537 POLGP54098 1239 aaPredicted RBP20.32■□□□□ 0.84
CLN5-219ENST00000637537 TUBB4BP68371 445 aa20.32■□□□□ 0.84
CLN5-219ENST00000637537 MYBPC2Q14324 1141 aa20.32■□□□□ 0.84
CLN5-219ENST00000637537 ARHGAP44Q17R89 818 aa20.32■□□□□ 0.84
CLN5-219ENST00000637537 KIAA0753Q2KHM9 967 aa20.32■□□□□ 0.84
CLN5-219ENST00000637537 PHLDB3Q6NSJ2 640 aa20.32■□□□□ 0.84
CLN5-219ENST00000637537 GPAT2Q6NUI2 795 aa20.32■□□□□ 0.84
CLN5-219ENST00000637537 TRIM58Q8NG06 486 aa20.32■□□□□ 0.84
CLN5-219ENST00000637537 CCDC127Q96BQ5 260 aa20.32■□□□□ 0.84
CLN5-219ENST00000637537 POP1Q99575 1024 aaKnown RBP20.32■□□□□ 0.84
CLN5-219ENST00000637537 FBXL5Q9UKA1 691 aa20.32■□□□□ 0.84
CLN5-219ENST00000637537 CLEC11AQ9Y240 323 aa20.32■□□□□ 0.84
CLN5-219ENST00000637537 GSTTP1A0A1W2PQM5 241 aa20.32■□□□□ 0.84
CLN5-219ENST00000637537 PJA2O43164 708 aa20.32■□□□□ 0.84
CLN5-219ENST00000637537 TACC1O75410 805 aa20.32■□□□□ 0.84
CLN5-219ENST00000637537 ARIH2O95376 493 aa20.32■□□□□ 0.84
CLN5-219ENST00000637537 DRAP1Q14919 205 aaPredicted RBP20.32■□□□□ 0.84
CLN5-219ENST00000637537 WHAMMP3Q1A5X7 153 aa20.32■□□□□ 0.84
CLN5-219ENST00000637537 MAP1SQ66K74 1059 aaPredicted RBP20.32■□□□□ 0.84
CLN5-219ENST00000637537 FGD4Q96M96 766 aa20.32■□□□□ 0.84
CLN5-219ENST00000637537 PCYT2Q99447 389 aa20.32■□□□□ 0.84
CLN5-219ENST00000637537 NTPCRQ9BSD7 190 aaKnown RBP20.32■□□□□ 0.84
CLN5-219ENST00000637537 MCM3APO60318 1980 aa20.32■□□□□ 0.84
CLN5-219ENST00000637537 F8VZ95 297 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 NCK2O43639 380 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 ATG7O95352 703 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 GGPS1O95749 300 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 OATP04181 439 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 EMC2Q15006 297 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 SNRNP35Q16560 246 aaKnown RBP20.31■□□□□ 0.84
CLN5-219ENST00000637537 ARMC9Q7Z3E5 817 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 C12orf56Q8IXR9 622 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 NOA1Q8NC60 698 aaKnown RBP20.31■□□□□ 0.84
CLN5-219ENST00000637537 MCPH1Q8NEM0 835 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 LMO3Q8TAP4 145 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 MMS19Q96T76 1030 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 GPR88Q9GZN0 384 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 ABCB6Q9NP58 842 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 APEX2Q9UBZ4 518 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 CTAGE15A4D2H0 777 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 EVI5O60447 810 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 CTAGE8P0CG41 777 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 CXCR5P32302 372 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 TUBB2AQ13885 445 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 TMEM63BQ5T3F8 832 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 LRRC31Q6UY01 552 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 TAS1R3Q7RTX0 852 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 CTAGE6Q86UF2 777 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 CTAGE4Q8IX94 777 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 FAM71BQ8TC56 605 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 PPM1EQ8WY54 764 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 ELMO3Q96BJ8 720 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 FAM84AQ96KN4 292 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 TUBB2BQ9BVA1 445 aa20.31■□□□□ 0.84
CLN5-219ENST00000637537 HNRNPDLO14979 420 aaKnown RBP20.3■□□□□ 0.84
CLN5-219ENST00000637537 RHOXF2BP0C7M4 288 aa20.3■□□□□ 0.84
CLN5-219ENST00000637537 RHOXF2Q9BQY4 288 aa20.3■□□□□ 0.84
CLN5-219ENST00000637537 MAF1Q9H063 256 aa20.3■□□□□ 0.84
CLN5-219ENST00000637537 EXOC7Q9UPT5 735 aa20.3■□□□□ 0.84
CLN5-219ENST00000637537 SPIRE2Q8WWL2 714 aa20.3■□□□□ 0.84
CLN5-219ENST00000637537 POMGNT1Q8WZA1 660 aa20.3■□□□□ 0.84
CLN5-219ENST00000637537 PORCNQ9H237 461 aa20.3■□□□□ 0.84
CLN5-219ENST00000637537 RNF216Q9NWF9 866 aaPredicted RBP20.3■□□□□ 0.84
CLN5-219ENST00000637537 SOCS7O14512 581 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 MARK3P27448 753 aa20.29■□□□□ 0.84
CLN5-219ENST00000637537 TCF7P36402 384 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms