RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 V9GYY5 206 aaPredicted RBP23.59■■□□□ 1.37
CHRNA7-228ENST00000637519 MAFO75444 373 aaPredicted RBP23.58■■□□□ 1.37
CHRNA7-228ENST00000637519 SERPING1P05155 500 aa23.58■■□□□ 1.37
CHRNA7-228ENST00000637519 SLC9C1Q4G0N8 1177 aa23.58■■□□□ 1.37
CHRNA7-228ENST00000637519 BBXQ8WY36 941 aaPredicted RBP23.58■■□□□ 1.37
CHRNA7-228ENST00000637519 TOPORSQ9NS56 1045 aaPredicted RBP23.58■■□□□ 1.37
CHRNA7-228ENST00000637519 LOC102724159A0A0B4J2E5 919 aa23.58■■□□□ 1.36
CHRNA7-228ENST00000637519 GJB1P08034 283 aa23.58■■□□□ 1.36
CHRNA7-228ENST00000637519 NAMPTP43490 491 aa23.58■■□□□ 1.36
CHRNA7-228ENST00000637519 PWP2Q15269 919 aaKnown RBP23.58■■□□□ 1.36
CHRNA7-228ENST00000637519 SPA17Q15506 151 aa23.58■■□□□ 1.36
CHRNA7-228ENST00000637519 SYN2Q92777 582 aaPredicted RBP23.58■■□□□ 1.36
CHRNA7-228ENST00000637519 FAM167AQ96KS9 214 aa23.58■■□□□ 1.36
CHRNA7-228ENST00000637519 NUCKS1Q9H1E3 243 aaKnown RBP23.58■■□□□ 1.36
CHRNA7-228ENST00000637519 LIG4P49917 911 aa23.57■■□□□ 1.36
CHRNA7-228ENST00000637519 SNRPFP62306 86 aaKnown RBP23.57■■□□□ 1.36
CHRNA7-228ENST00000637519 KLHL30Q0D2K2 578 aa23.57■■□□□ 1.36
CHRNA7-228ENST00000637519 PLPPR4Q7Z2D5 763 aa23.57■■□□□ 1.36
CHRNA7-228ENST00000637519 PRPF31Q8WWY3 499 aaKnown RBP23.57■■□□□ 1.36
CHRNA7-228ENST00000637519 ZBTB45Q96K62 511 aaPredicted RBP23.57■■□□□ 1.36
CHRNA7-228ENST00000637519 IFIH1Q9BYX4 1025 aaKnown RBP23.57■■□□□ 1.36
CHRNA7-228ENST00000637519 RNPEPQ9H4A4 650 aa23.57■■□□□ 1.36
CHRNA7-228ENST00000637519 HAUS4Q9H6D7 363 aa23.57■■□□□ 1.36
CHRNA7-228ENST00000637519 VTA1Q9NP79 307 aa23.57■■□□□ 1.36
CHRNA7-228ENST00000637519 AIPL1Q9NZN9 384 aa23.57■■□□□ 1.36
CHRNA7-228ENST00000637519 PCDHA13Q9Y5I0 950 aa23.57■■□□□ 1.36
CHRNA7-228ENST00000637519 ZNF286BP0CG31 522 aa23.56■■□□□ 1.36
CHRNA7-228ENST00000637519 VAV2P52735 878 aa23.56■■□□□ 1.36
CHRNA7-228ENST00000637519 JAM2P57087 298 aa23.56■■□□□ 1.36
CHRNA7-228ENST00000637519 MAPK8IP2Q13387 824 aaPredicted RBP23.56■■□□□ 1.36
CHRNA7-228ENST00000637519 BRDTQ58F21 947 aaPredicted RBP23.56■■□□□ 1.36
CHRNA7-228ENST00000637519 SAPCD2Q86UD0 394 aa23.56■■□□□ 1.36
CHRNA7-228ENST00000637519 AFG1LQ8WV93 481 aa23.56■■□□□ 1.36
CHRNA7-228ENST00000637519 FAM213AQ9BRX8 229 aa23.56■■□□□ 1.36
CHRNA7-228ENST00000637519 HAPLN2Q9GZV7 340 aa23.56■■□□□ 1.36
CHRNA7-228ENST00000637519 TRPM7Q96QT4 1865 aa23.56■■□□□ 1.36
CHRNA7-228ENST00000637519 MACROD2A1Z1Q3 448 aa23.56■■□□□ 1.36
CHRNA7-228ENST00000637519 TTLL13PA6NNM8 815 aa23.56■■□□□ 1.36
CHRNA7-228ENST00000637519 TAF1CQ15572 869 aaPredicted RBP23.56■■□□□ 1.36
CHRNA7-228ENST00000637519 IRF2BP2Q7Z5L9 587 aa23.56■■□□□ 1.36
CHRNA7-228ENST00000637519 LMO3Q8TAP4 145 aa23.56■■□□□ 1.36
CHRNA7-228ENST00000637519 ELMO3Q96BJ8 720 aa23.56■■□□□ 1.36
CHRNA7-228ENST00000637519 TARS2Q9BW92 718 aaKnown RBP23.56■■□□□ 1.36
CHRNA7-228ENST00000637519 ZHX1Q9UKY1 873 aaPredicted RBP23.56■■□□□ 1.36
CHRNA7-228ENST00000637519 CENPFP49454 3210 aa23.55■■□□□ 1.36
CHRNA7-228ENST00000637519 SSU72P8A0A1W2PR75 194 aa23.55■■□□□ 1.36
CHRNA7-228ENST00000637519 ADCY6O43306 1168 aa23.55■■□□□ 1.36
CHRNA7-228ENST00000637519 CTIFO43310 598 aaKnown RBP23.55■■□□□ 1.36
CHRNA7-228ENST00000637519 IGBP1P78318 339 aa23.55■■□□□ 1.36
CHRNA7-228ENST00000637519 STRN3Q13033 797 aa23.55■■□□□ 1.36
CHRNA7-228ENST00000637519 PHLDB3Q6NSJ2 640 aa23.55■■□□□ 1.36
CHRNA7-228ENST00000637519 TMEM117Q9H0C3 514 aa23.55■■□□□ 1.36
CHRNA7-228ENST00000637519 SMARCAD1Q9H4L7 1026 aa23.55■■□□□ 1.36
CHRNA7-228ENST00000637519 DNAJC12Q9UKB3 198 aa23.55■■□□□ 1.36
CHRNA7-228ENST00000637519 ADGRA2Q96PE1 1338 aa23.55■■□□□ 1.36
CHRNA7-228ENST00000637519 LRRIQ3A6PVS8 624 aaPredicted RBP23.55■■□□□ 1.36
CHRNA7-228ENST00000637519 K7ERI5 159 aa23.55■■□□□ 1.36
CHRNA7-228ENST00000637519 LGALS2P05162 132 aa23.55■■□□□ 1.36
CHRNA7-228ENST00000637519 MAPK4P31152 587 aa23.55■■□□□ 1.36
CHRNA7-228ENST00000637519 PTK2Q05397 1052 aa23.55■■□□□ 1.36
CHRNA7-228ENST00000637519 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.55■■□□□ 1.36
CHRNA7-228ENST00000637519 ANKFY1Q9P2R3 1169 aa23.55■■□□□ 1.36
CHRNA7-228ENST00000637519 A0A087X0T9 212 aa23.54■■□□□ 1.36
CHRNA7-228ENST00000637519 DYNC1I1O14576 645 aa23.54■■□□□ 1.36
CHRNA7-228ENST00000637519 GFPT2O94808 682 aa23.54■■□□□ 1.36
CHRNA7-228ENST00000637519 LCA5LO95447 670 aa23.54■■□□□ 1.36
CHRNA7-228ENST00000637519 GH1P01241 217 aa23.54■■□□□ 1.36
CHRNA7-228ENST00000637519 TFRCP02786 760 aaKnown RBP23.54■■□□□ 1.36
CHRNA7-228ENST00000637519 FAM228BP0C875 321 aa23.54■■□□□ 1.36
CHRNA7-228ENST00000637519 SRGAP2CP0DJJ0 459 aa23.54■■□□□ 1.36
CHRNA7-228ENST00000637519 WNT7BP56706 349 aa23.54■■□□□ 1.36
CHRNA7-228ENST00000637519 MAP2K1Q02750 393 aaPredicted RBP23.54■■□□□ 1.36
CHRNA7-228ENST00000637519 ZNF467Q7Z7K2 595 aaPredicted RBP23.54■■□□□ 1.36
CHRNA7-228ENST00000637519 DNAAF5Q86Y56 855 aa23.54■■□□□ 1.36
CHRNA7-228ENST00000637519 GPD1LQ8N335 351 aa23.54■■□□□ 1.36
CHRNA7-228ENST00000637519 FBXL18Q96ME1 805 aa23.54■■□□□ 1.36
CHRNA7-228ENST00000637519 TINF2Q9BSI4 451 aa23.54■■□□□ 1.36
CHRNA7-228ENST00000637519 ADAMTS1Q9UHI8 967 aa23.54■■□□□ 1.36
CHRNA7-228ENST00000637519 H0YCG3 227 aa23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 SLU7O95391 586 aaKnown RBP23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 DLATP10515 647 aaKnown RBP23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 SMPD1P17405 629 aa23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 MXI1P50539 228 aa23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 CLCN3P51790 818 aa23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 LAMC2Q13753 1193 aa23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 ZBTB41Q5SVQ8 909 aa23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 PRAMEF19Q5SWL8 479 aa23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 RGMBQ6NW40 437 aa23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 ZNF571Q7Z3V5 609 aaPredicted RBP23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 ARHGEF19Q8IW93 802 aa23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 PARD3BQ8TEW8 1205 aa23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 GPR88Q9GZN0 384 aa23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 APEX2Q9UBZ4 518 aa23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 FBXL5Q9UKA1 691 aa23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 SIP14410 1827 aa23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 F8VZ95 297 aa23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 MAPK13O15264 365 aa23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 NLRP11P59045 1033 aaKnown RBP23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 CYP24A1Q07973 514 aa23.53■■□□□ 1.36
CHRNA7-228ENST00000637519 DRAP1Q14919 205 aaPredicted RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms