RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 PAPOLBQ9NRJ5 636 aaKnown RBP3.38□□□□□ -1.87
VIM-210ENST00000637053 DONSONQ9NYP3 566 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 DKK3Q9UBP4 350 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 SRRDQ9UH36 339 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 SAP30BPQ9UHR5 308 aaKnown RBP3.38□□□□□ -1.87
VIM-210ENST00000637053 LAMP5Q9UJQ1 280 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 PPT2Q9UMR5 302 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 DUSP12Q9UNI6 340 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 ZNF281Q9Y2X9 895 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 SLC30A1Q9Y6M5 507 aa3.38□□□□□ -1.87
VIM-210ENST00000637053 C17orf113A0A1B0GUU1 675 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 FSD2A1L4K1 749 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 RRN3P2A6NIE6 340 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 TMCO5BA8MYB1 307 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 F8W031 263 aaPredicted RBP3.37□□□□□ -1.87
VIM-210ENST00000637053 M0QX08 132 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 HOXC11O43248 304 aaPredicted RBP3.37□□□□□ -1.87
VIM-210ENST00000637053 AHCYL1O43865 530 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 MAFKO60675 156 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 KRT38O76015 456 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 GJB6O95452 261 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 DDX58O95786 925 aaKnown RBP3.37□□□□□ -1.87
VIM-210ENST00000637053 GUCA1CO95843 209 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 MT-ND3P03897 115 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 ASGR2P07307 311 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 SLC3A2P08195 630 aaKnown RBP3.37□□□□□ -1.87
VIM-210ENST00000637053 FAM153BP0C7A2 387 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 USP17L7P0C7H9 530 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 AKR1B1P15121 316 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 LTKP29376 864 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 GRK4P32298 578 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 HSPA1LP34931 641 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 EIF4A3P38919 411 aaKnown RBP3.37□□□□□ -1.87
VIM-210ENST00000637053 TNNT3P45378 269 aaPredicted RBP3.37□□□□□ -1.87
VIM-210ENST00000637053 PHKA1P46020 1223 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 CHRNEQ04844 493 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 PDE4BQ07343 736 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 ZBTB17Q13105 803 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 PPFIA1Q13136 1202 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 SCARB2Q14108 478 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 SEMA3AQ14563 771 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 RASA2Q15283 850 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 ANKRD1Q15327 319 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 CLUL1Q15846 466 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 SLC14A2Q15849 920 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 ASIC2Q16515 512 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 ZNF827Q17R98 1081 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 ABCB5Q2M3G0 1257 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 PREPLQ4J6C6 727 aaPredicted RBP3.37□□□□□ -1.87
VIM-210ENST00000637053 VWA3BQ502W6 1294 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 CCDC30Q5VVM6 783 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 CNNM4Q6P4Q7 775 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 KDELC1Q6UW63 502 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 BNC2Q6ZN30 1099 aaPredicted RBP3.37□□□□□ -1.87
VIM-210ENST00000637053 ARHGEF18Q6ZSZ5 1173 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 RAPH1Q70E73 1250 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 RUFY3Q7L099 469 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 HDXQ7Z353 690 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 SLC9B2Q86UD5 537 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 VSIG1Q86XK7 387 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 DZIP1Q86YF9 867 aaKnown RBP3.37□□□□□ -1.87
VIM-210ENST00000637053 EPHX4Q8IUS5 362 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 SLFN12Q8IYM2 578 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 CBARPQ8N350 705 aaPredicted RBP3.37□□□□□ -1.87
VIM-210ENST00000637053 ANKS4BQ8N8V4 417 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 DTWD2Q8NBA8 298 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 PPP1R14CQ8TAE6 165 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 ADAMTS18Q8TE60 1221 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 COG1Q8WTW3 980 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 ZNF296Q8WUU4 475 aaPredicted RBP3.37□□□□□ -1.87
VIM-210ENST00000637053 LEO1Q8WVC0 666 aaPredicted RBP3.37□□□□□ -1.87
VIM-210ENST00000637053 KCTD13Q8WZ19 329 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 CENPIQ92674 756 aaPredicted RBP3.37□□□□□ -1.87
VIM-210ENST00000637053 GAL3ST3Q96A11 431 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 CFAP36Q96G28 342 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 CLMNQ96JQ2 1002 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 UBXN10Q96LJ8 280 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 JAKMIP1Q96N16 626 aaKnown RBP3.37□□□□□ -1.87
VIM-210ENST00000637053 BAG1Q99933 345 aaPredicted RBP3.37□□□□□ -1.87
VIM-210ENST00000637053 NCAPGQ9BPX3 1015 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 GPATCH1Q9BRR8 931 aaKnown RBP3.37□□□□□ -1.87
VIM-210ENST00000637053 PI4K2AQ9BTU6 479 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 RSRP1Q9BUV0 290 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 NT5C1AQ9BXI3 368 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 MAK16Q9BXY0 300 aaKnown RBP3.37□□□□□ -1.87
VIM-210ENST00000637053 DNAI2Q9GZS0 605 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 SLC12A5Q9H2X9 1139 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 TRIT1Q9H3H1 467 aaKnown RBP3.37□□□□□ -1.87
VIM-210ENST00000637053 BRD9Q9H8M2 597 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 TRPV4Q9HBA0 871 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 TCF7L1Q9HCS4 588 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 TRPV5Q9NQA5 729 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 PDLIM7Q9NR12 457 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 GPATCH2Q9NW75 528 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 PPP4R2Q9NY27 417 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 AIPL1Q9NZN9 384 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 CNOT11Q9UKZ1 510 aaKnown RBP3.37□□□□□ -1.87
VIM-210ENST00000637053 KNSTRNQ9Y448 316 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 TRIM17Q9Y577 477 aa3.37□□□□□ -1.87
VIM-210ENST00000637053 DDX49Q9Y6V7 483 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms