RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 CCDC47Q96A33 483 aaKnown RBP17.61■□□□□ 0.41
CLN6-216ENST00000636876 PRIMPOLQ96LW4 560 aa17.61■□□□□ 0.41
CLN6-216ENST00000636876 GDF15Q99988 308 aa17.61■□□□□ 0.41
CLN6-216ENST00000636876 PRO3102Q9H379 93 aa17.61■□□□□ 0.41
CLN6-216ENST00000636876 TMX1Q9H3N1 280 aa17.61■□□□□ 0.41
CLN6-216ENST00000636876 AGPAT5Q9NUQ2 364 aa17.61■□□□□ 0.41
CLN6-216ENST00000636876 ACKR2O00590 384 aa17.6■□□□□ 0.41
CLN6-216ENST00000636876 TSPAN1O60635 241 aa17.6■□□□□ 0.41
CLN6-216ENST00000636876 PPP1R37O75864 691 aa17.6■□□□□ 0.41
CLN6-216ENST00000636876 FGBP02675 491 aa17.6■□□□□ 0.41
CLN6-216ENST00000636876 ABCD1P33897 745 aa17.6■□□□□ 0.41
CLN6-216ENST00000636876 GTF2BQ00403 316 aa17.6■□□□□ 0.41
CLN6-216ENST00000636876 DSC3Q14574 896 aa17.6■□□□□ 0.41
CLN6-216ENST00000636876 KCNB1Q14721 858 aa17.6■□□□□ 0.41
CLN6-216ENST00000636876 ZNF365Q70YC5 407 aa17.6■□□□□ 0.41
CLN6-216ENST00000636876 SPATA20Q8TB22 786 aa17.6■□□□□ 0.41
CLN6-216ENST00000636876 ERCC4Q92889 916 aaPredicted RBP17.6■□□□□ 0.41
CLN6-216ENST00000636876 STRA6Q9BX79 667 aa17.6■□□□□ 0.41
CLN6-216ENST00000636876 FGFBP2Q9BYJ0 223 aa17.6■□□□□ 0.41
CLN6-216ENST00000636876 PCDHA5Q9Y5H7 936 aa17.6■□□□□ 0.41
CLN6-216ENST00000636876 CNTNAP2Q9UHC6 1331 aa17.59■□□□□ 0.41
CLN6-216ENST00000636876 B4GALT5O43286 388 aa17.59■□□□□ 0.41
CLN6-216ENST00000636876 MGEA5O60502 916 aa17.59■□□□□ 0.41
CLN6-216ENST00000636876 RHOBTB3O94955 611 aa17.59■□□□□ 0.41
CLN6-216ENST00000636876 GCNT3O95395 438 aa17.59■□□□□ 0.41
CLN6-216ENST00000636876 EDN1P05305 212 aa17.59■□□□□ 0.41
CLN6-216ENST00000636876 MYBP10242 640 aa17.59■□□□□ 0.41
CLN6-216ENST00000636876 ACTN1P12814 892 aa17.59■□□□□ 0.41
CLN6-216ENST00000636876 AXLP30530 894 aa17.59■□□□□ 0.41
CLN6-216ENST00000636876 HOXA11P31270 313 aaPredicted RBP17.59■□□□□ 0.41
CLN6-216ENST00000636876 CASP5P51878 434 aa17.59■□□□□ 0.41
CLN6-216ENST00000636876 NCBP1Q09161 790 aaKnown RBP17.59■□□□□ 0.41
CLN6-216ENST00000636876 STRN3Q13033 797 aa17.59■□□□□ 0.41
CLN6-216ENST00000636876 PSMD2Q13200 908 aa17.59■□□□□ 0.41
CLN6-216ENST00000636876 PRPF4BQ13523 1007 aaKnown RBP17.59■□□□□ 0.41
CLN6-216ENST00000636876 ALCAMQ13740 583 aa17.59■□□□□ 0.41
CLN6-216ENST00000636876 IKBKEQ14164 716 aa17.59■□□□□ 0.41
CLN6-216ENST00000636876 CAMK4Q16566 473 aa17.59■□□□□ 0.41
CLN6-216ENST00000636876 ZC2HC1CQ53FD0 456 aaPredicted RBP17.59■□□□□ 0.41
CLN6-216ENST00000636876 SMARCE1Q969G3 411 aa17.59■□□□□ 0.41
CLN6-216ENST00000636876 HVCN1Q96D96 273 aa17.59■□□□□ 0.41
CLN6-216ENST00000636876 GSDMAQ96QA5 445 aa17.59■□□□□ 0.41
CLN6-216ENST00000636876 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.59■□□□□ 0.41
CLN6-216ENST00000636876 FTHL17Q9BXU8 183 aa17.59■□□□□ 0.41
CLN6-216ENST00000636876 NUP62CLQ9H1M0 184 aa17.59■□□□□ 0.41
CLN6-216ENST00000636876 TBX20Q9UMR3 447 aa17.59■□□□□ 0.41
CLN6-216ENST00000636876 PIN4Q9Y237 131 aaKnown RBP17.59■□□□□ 0.41
CLN6-216ENST00000636876 PCDHB13Q9Y5F0 798 aa17.59■□□□□ 0.41
CLN6-216ENST00000636876 ABHD14A-ACY1A0A1B0GW23 586 aa17.58■□□□□ 0.4
CLN6-216ENST00000636876 TTLL13PA6NNM8 815 aa17.58■□□□□ 0.4
CLN6-216ENST00000636876 BAIAP3O94812 1187 aa17.58■□□□□ 0.4
CLN6-216ENST00000636876 ARF4P18085 180 aaPredicted RBP17.58■□□□□ 0.4
CLN6-216ENST00000636876 SARSP49591 514 aaKnown RBP17.58■□□□□ 0.4
CLN6-216ENST00000636876 NT5DC1Q5TFE4 455 aa17.58■□□□□ 0.4
CLN6-216ENST00000636876 STXBP4Q6ZWJ1 553 aa17.58■□□□□ 0.4
CLN6-216ENST00000636876 MAP4K3Q8IVH8 894 aa17.58■□□□□ 0.4
CLN6-216ENST00000636876 GLIS3Q8NEA6 775 aa17.58■□□□□ 0.4
CLN6-216ENST00000636876 LINC01599Q8WXQ3 324 aa17.58■□□□□ 0.4
CLN6-216ENST00000636876 MRPL4Q9BYD3 311 aaKnown RBP17.58■□□□□ 0.4
CLN6-216ENST00000636876 TSPYL2Q9H2G4 693 aaPredicted RBP17.58■□□□□ 0.4
CLN6-216ENST00000636876 SLC39A2Q9NP94 309 aa17.58■□□□□ 0.4
CLN6-216ENST00000636876 CHST12Q9NRB3 414 aa17.58■□□□□ 0.4
CLN6-216ENST00000636876 RMND1Q9NWS8 449 aa17.58■□□□□ 0.4
CLN6-216ENST00000636876 USP20Q9Y2K6 914 aa17.58■□□□□ 0.4
CLN6-216ENST00000636876 MICAL3Q7RTP6 2002 aa17.58■□□□□ 0.4
CLN6-216ENST00000636876 LAMA3Q16787 3333 aa17.57■□□□□ 0.4
CLN6-216ENST00000636876 EIF3DO15371 548 aaKnown RBP eCLIP17.57■□□□□ 0.4
CLN6-216ENST00000636876 EFCAB14O75071 495 aa17.57■□□□□ 0.4
CLN6-216ENST00000636876 ZSCAN20P17040 1043 aaPredicted RBP17.57■□□□□ 0.4
CLN6-216ENST00000636876 STK4Q13043 487 aa17.57■□□□□ 0.4
CLN6-216ENST00000636876 L1TD1Q5T7N2 865 aaKnown RBP17.57■□□□□ 0.4
CLN6-216ENST00000636876 NOTUMQ6P988 496 aa17.57■□□□□ 0.4
CLN6-216ENST00000636876 EPM2AIP1Q7L775 607 aaPredicted RBP17.57■□□□□ 0.4
CLN6-216ENST00000636876 OTOP2Q7RTS6 562 aa17.57■□□□□ 0.4
CLN6-216ENST00000636876 RTN4RL1Q86UN2 441 aaPredicted RBP17.57■□□□□ 0.4
CLN6-216ENST00000636876 KIAA0895Q8NCT3 520 aa17.57■□□□□ 0.4
CLN6-216ENST00000636876 HERVK_113Q902F9 699 aa17.57■□□□□ 0.4
CLN6-216ENST00000636876 CCDC51Q96ER9 411 aa17.57■□□□□ 0.4
CLN6-216ENST00000636876 CPB2Q96IY4 423 aa17.57■□□□□ 0.4
CLN6-216ENST00000636876 ACO2Q99798 780 aaKnown RBP17.57■□□□□ 0.4
CLN6-216ENST00000636876 ADAM2Q99965 735 aa17.57■□□□□ 0.4
CLN6-216ENST00000636876 TARS2Q9BW92 718 aaKnown RBP17.57■□□□□ 0.4
CLN6-216ENST00000636876 UBE2OQ9C0C9 1292 aaKnown RBP17.57■□□□□ 0.4
CLN6-216ENST00000636876 KIAA1468Q9P260 1216 aa17.57■□□□□ 0.4
CLN6-216ENST00000636876 ENPP3O14638 875 aa17.56■□□□□ 0.4
CLN6-216ENST00000636876 PIGRP01833 764 aa17.56■□□□□ 0.4
CLN6-216ENST00000636876 TMEM132AQ24JP5 1023 aa17.56■□□□□ 0.4
CLN6-216ENST00000636876 ACCSQ96QU6 501 aa17.56■□□□□ 0.4
CLN6-216ENST00000636876 PDZD7Q9H5P4 517 aa17.56■□□□□ 0.4
CLN6-216ENST00000636876 RGS18Q9NS28 235 aa17.56■□□□□ 0.4
CLN6-216ENST00000636876 MAN1B1Q9UKM7 699 aa17.56■□□□□ 0.4
CLN6-216ENST00000636876 LAMA2P24043 3122 aaKnown RBP17.55■□□□□ 0.4
CLN6-216ENST00000636876 UBE4BO95155 1302 aa17.55■□□□□ 0.4
CLN6-216ENST00000636876 A0A1B0GUA9 196 aa17.55■□□□□ 0.4
CLN6-216ENST00000636876 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.55■□□□□ 0.4
CLN6-216ENST00000636876 ZBBXA8MT70 800 aa17.55■□□□□ 0.4
CLN6-216ENST00000636876 N4BP3O15049 544 aa17.55■□□□□ 0.4
CLN6-216ENST00000636876 PRPF6O94906 941 aaKnown RBP17.55■□□□□ 0.4
CLN6-216ENST00000636876 BMP8BP34820 402 aa17.55■□□□□ 0.4
CLN6-216ENST00000636876 WDR5P61964 334 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms