RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 PRKCBP05771 671 aa17.07■□□□□ 0.32
CTSD-207ENST00000636571 CCDC192P0DO97 292 aa17.07■□□□□ 0.32
CTSD-207ENST00000636571 SARSP49591 514 aaKnown RBP17.07■□□□□ 0.32
CTSD-207ENST00000636571 SMTNP53814 917 aa17.07■□□□□ 0.32
CTSD-207ENST00000636571 STK4Q13043 487 aa17.07■□□□□ 0.32
CTSD-207ENST00000636571 OTOP2Q7RTS6 562 aa17.07■□□□□ 0.32
CTSD-207ENST00000636571 SMYD4Q8IYR2 804 aaPredicted RBP17.07■□□□□ 0.32
CTSD-207ENST00000636571 KIAA0895Q8NCT3 520 aa17.07■□□□□ 0.32
CTSD-207ENST00000636571 LINC01599Q8WXQ3 324 aa17.07■□□□□ 0.32
CTSD-207ENST00000636571 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.07■□□□□ 0.32
CTSD-207ENST00000636571 FZD8Q9H461 694 aa17.07■□□□□ 0.32
CTSD-207ENST00000636571 OLFML3Q9NRN5 406 aa17.07■□□□□ 0.32
CTSD-207ENST00000636571 EXOC1Q9NV70 894 aa17.07■□□□□ 0.32
CTSD-207ENST00000636571 GDAQ9Y2T3 454 aa17.07■□□□□ 0.32
CTSD-207ENST00000636571 PTPRSQ13332 1948 aa17.06■□□□□ 0.32
CTSD-207ENST00000636571 K7ERI5 159 aa17.06■□□□□ 0.32
CTSD-207ENST00000636571 PPP1R37O75864 691 aa17.06■□□□□ 0.32
CTSD-207ENST00000636571 PRPF6O94906 941 aaKnown RBP17.06■□□□□ 0.32
CTSD-207ENST00000636571 MYL1P05976 194 aa17.06■□□□□ 0.32
CTSD-207ENST00000636571 ARF4P18085 180 aaPredicted RBP17.06■□□□□ 0.32
CTSD-207ENST00000636571 SFPQP23246 707 aaKnown RBP eCLIP17.06■□□□□ 0.32
CTSD-207ENST00000636571 HOXA11P31270 313 aaPredicted RBP17.06■□□□□ 0.32
CTSD-207ENST00000636571 RFC2P35250 354 aa17.06■□□□□ 0.32
CTSD-207ENST00000636571 PPIGQ13427 754 aaKnown RBP eCLIP17.06■□□□□ 0.32
CTSD-207ENST00000636571 FAM26FQ5R3K3 315 aa17.06■□□□□ 0.32
CTSD-207ENST00000636571 ZNF365Q70YC5 407 aa17.06■□□□□ 0.32
CTSD-207ENST00000636571 RTN4RL1Q86UN2 441 aaPredicted RBP17.06■□□□□ 0.32
CTSD-207ENST00000636571 SPATA20Q8TB22 786 aa17.06■□□□□ 0.32
CTSD-207ENST00000636571 C2orf40Q9H1Z8 148 aa17.06■□□□□ 0.32
CTSD-207ENST00000636571 TSPY26PQ9H489 355 aa17.06■□□□□ 0.32
CTSD-207ENST00000636571 PHLPP2Q6ZVD8 1323 aa17.06■□□□□ 0.32
CTSD-207ENST00000636571 TISP43B9A030 160 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 GPR182O15218 404 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 IBSPP21815 317 aaPredicted RBP17.05■□□□□ 0.32
CTSD-207ENST00000636571 BMP6P22004 513 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 MAPK6Q16659 721 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 C9orf50Q5SZB4 431 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 NT5DC1Q5TFE4 455 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 ZNF710Q8N1W2 664 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 STRA6Q9BX79 667 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 SEL1LQ9UBV2 794 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 TBX20Q9UMR3 447 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 PIN4Q9Y237 131 aaKnown RBP17.05■□□□□ 0.32
CTSD-207ENST00000636571 SQORQ9Y6N5 450 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 ERLIN2O94905 339 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 RHOBTB3O94955 611 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 PARNO95453 639 aaKnown RBP17.05■□□□□ 0.32
CTSD-207ENST00000636571 HOXD13P35453 343 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 GTF2BQ00403 316 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 DPCR1Q3MIW9 517 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 ANO6Q4KMQ2 910 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 TMEM240Q5SV17 173 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 TMCO2Q7Z6W1 182 aaPredicted RBP17.05■□□□□ 0.32
CTSD-207ENST00000636571 USP38Q8NB14 1042 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 SEPT8Q92599 483 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 GSDMAQ96QA5 445 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 TARS2Q9BW92 718 aaKnown RBP17.05■□□□□ 0.32
CTSD-207ENST00000636571 DNAJC25Q9H1X3 360 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 TMEM134Q9H6X4 195 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 AGPAT5Q9NUQ2 364 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 PRMT7Q9NVM4 692 aaPredicted RBP17.05■□□□□ 0.32
CTSD-207ENST00000636571 CXXC1Q9P0U4 656 aaPredicted RBP17.05■□□□□ 0.32
CTSD-207ENST00000636571 MAPK8IP1Q9UQF2 711 aa17.05■□□□□ 0.32
CTSD-207ENST00000636571 ACKR2O00590 384 aa17.04■□□□□ 0.32
CTSD-207ENST00000636571 EFNA5P52803 228 aa17.04■□□□□ 0.32
CTSD-207ENST00000636571 NLRP12P59046 1061 aa17.04■□□□□ 0.32
CTSD-207ENST00000636571 PRPF4BQ13523 1007 aaKnown RBP17.04■□□□□ 0.32
CTSD-207ENST00000636571 MORC3Q14149 939 aa17.04■□□□□ 0.32
CTSD-207ENST00000636571 STX1AQ16623 288 aa17.04■□□□□ 0.32
CTSD-207ENST00000636571 EEF1DP3Q658K8 133 aa17.04■□□□□ 0.32
CTSD-207ENST00000636571 CNKSR3Q6P9H4 555 aa17.04■□□□□ 0.32
CTSD-207ENST00000636571 PPP4R3CPQ6ZMV5 832 aa17.04■□□□□ 0.32
CTSD-207ENST00000636571 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.04■□□□□ 0.321e-9■■■□□ 19.2
CTSD-207ENST00000636571 C11orf57Q6ZUT1 292 aaPredicted RBP17.04■□□□□ 0.32
CTSD-207ENST00000636571 RPUSD2Q8IZ73 545 aaKnown RBP17.04■□□□□ 0.32
CTSD-207ENST00000636571 SCFD1Q8WVM8 642 aa17.04■□□□□ 0.32
CTSD-207ENST00000636571 ZBTB45Q96K62 511 aaPredicted RBP17.04■□□□□ 0.32
CTSD-207ENST00000636571 GDF15Q99988 308 aa17.04■□□□□ 0.32
CTSD-207ENST00000636571 CNTNAP2Q9UHC6 1331 aa17.03■□□□□ 0.32
CTSD-207ENST00000636571 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.03■□□□□ 0.32
CTSD-207ENST00000636571 DSC3Q14574 896 aa17.03■□□□□ 0.32
CTSD-207ENST00000636571 KCNB1Q14721 858 aa17.03■□□□□ 0.32
CTSD-207ENST00000636571 FAM187BQ17R55 369 aa17.03■□□□□ 0.32
CTSD-207ENST00000636571 EPM2AIP1Q7L775 607 aaPredicted RBP17.03■□□□□ 0.32
CTSD-207ENST00000636571 NELFCDQ8IXH7 590 aa17.03■□□□□ 0.32
CTSD-207ENST00000636571 ADAM2Q99965 735 aa17.03■□□□□ 0.32
CTSD-207ENST00000636571 EIF2AQ9BY44 585 aaKnown RBP17.03■□□□□ 0.32
CTSD-207ENST00000636571 ST6GALNAC4Q9H4F1 302 aa17.03■□□□□ 0.32
CTSD-207ENST00000636571 ZMYM2Q9UBW7 1377 aa17.02■□□□□ 0.32
CTSD-207ENST00000636571 FGBP02675 491 aa17.02■□□□□ 0.32
CTSD-207ENST00000636571 SLC39A4Q6P5W5 647 aa17.02■□□□□ 0.32
CTSD-207ENST00000636571 RNF214Q8ND24 703 aa17.02■□□□□ 0.32
CTSD-207ENST00000636571 HAPLN2Q9GZV7 340 aa17.02■□□□□ 0.32
CTSD-207ENST00000636571 PDZD7Q9H5P4 517 aa17.02■□□□□ 0.32
CTSD-207ENST00000636571 ANO10Q9NW15 660 aa17.02■□□□□ 0.32
CTSD-207ENST00000636571 ANKRD63C9JTQ0 380 aa17.02■□□□□ 0.31
CTSD-207ENST00000636571 ENPP3O14638 875 aa17.02■□□□□ 0.31
CTSD-207ENST00000636571 DEFB103AP81534 67 aa17.02■□□□□ 0.31
CTSD-207ENST00000636571 STRN3Q13033 797 aa17.02■□□□□ 0.31
CTSD-207ENST00000636571 SHHQ15465 462 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms