RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 CETN3O15182 167 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 PFDN1O60925 122 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 ENTPD3O75355 529 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 UNC5CO95185 931 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 SHMT1P34896 483 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 ACVR2BQ13705 512 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 DACT2Q5SW24 774 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 C6orf118Q5T5N4 469 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 MEI1Q5TIA1 1274 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 PDXDC2PQ6P474 469 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 BTNL9Q6UXG8 535 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 KIF2BQ8N4N8 673 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 C4orf32Q8N8J7 132 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 RSPH1Q8WYR4 309 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 SEC14L1Q92503 715 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 GATA6Q92908 595 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 SLC35B4Q969S0 331 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 OLFM3Q96PB7 478 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 NUDCD1Q96RS6 583 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 PIGSQ96S52 555 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 SMC6Q96SB8 1091 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 MPHOSPH6Q99547 160 aaKnown RBP11.57□□□□□ -0.56
CHD2-223ENST00000636306 SELENOSQ9BQE4 189 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 TXLNGYQ9BZA5 131 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 EDEM3Q9BZQ6 932 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 ADAM7Q9H2U9 754 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 SLITRK6Q9H5Y7 841 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 DCLRE1BQ9H816 532 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 AIPL1Q9NZN9 384 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 NYAP2Q9P242 653 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 PI4KBQ9UBF8 816 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 PRKAG3Q9UGI9 489 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 TUBGCP4Q9UGJ1 667 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 BAZ2BQ9UIF8 2168 aaKnown RBP11.57□□□□□ -0.56
CHD2-223ENST00000636306 A0A087X0B3 334 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 SSU72P8A0A1W2PR75 194 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 SIGLEC16A6NMB1 481 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 DCDC2CA8MYV0 355 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 RBAK-RBAKDNI3L0D1 243 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 AKR1B10O60218 316 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 ZNF189O75820 626 aaPredicted RBP11.56□□□□□ -0.56
CHD2-223ENST00000636306 TJP3O95049 919 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 PTDSS1P48651 473 aaKnown RBP11.56□□□□□ -0.56
CHD2-223ENST00000636306 AMPD3Q01432 767 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 MCL1Q07820 350 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 CBX3Q13185 183 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 MAP7Q14244 749 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 TYW1BQ6NUM6 668 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 TMEM179Q6ZVK1 233 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 ADSSL1Q8N142 457 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 LRRC47Q8N1G4 583 aaKnown RBP11.56□□□□□ -0.56
CHD2-223ENST00000636306 ACTRT1Q8TDG2 376 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 TAF4BQ92750 862 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 GRAMD1AQ96CP6 724 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 DDX27Q96GQ7 796 aaKnown RBP11.56□□□□□ -0.56
CHD2-223ENST00000636306 MAML3Q96JK9 1138 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 CENPKQ9BS16 269 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 SPATA16Q9BXB7 569 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 KANSL2Q9H9L4 492 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 SPATA7Q9P0W8 599 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 ATRNL1Q5VV63 1379 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 SCN9AQ15858 1988 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 EIF4E1BA6NMX2 242 aaKnown RBP11.56□□□□□ -0.56
CHD2-223ENST00000636306 BTBD19C9JJ37 291 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 WNT7AO00755 349 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 SLC26A4O43511 780 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 CCNT1O60563 726 aaKnown RBP11.56□□□□□ -0.56
CHD2-223ENST00000636306 MYBL1P10243 752 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 KCNA3P22001 575 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 EIF4A3P38919 411 aaKnown RBP11.56□□□□□ -0.56
CHD2-223ENST00000636306 SERPINB4P48594 390 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 USP46P62068 366 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 TRADDQ15628 312 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 SLC35G1Q2M3R5 365 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 LETM2Q2VYF4 491 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 LONP2Q86WA8 852 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 ZSCAN29Q8IWY8 852 aaPredicted RBP11.56□□□□□ -0.56
CHD2-223ENST00000636306 RASGRP4Q8TDF6 673 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 CALML4Q96GE6 196 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 HIC2Q96JB3 615 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 PSMB7Q99436 277 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 NAP1L3Q99457 506 aaPredicted RBP11.56□□□□□ -0.56
CHD2-223ENST00000636306 LRRC27Q9C0I9 530 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 VPS33BQ9H267 617 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 UNC45AQ9H3U1 944 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 OCEL1Q9H607 264 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 HDAC9Q9UKV0 1011 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 ZNF148Q9UQR1 794 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 USP20Q9Y2K6 914 aa11.56□□□□□ -0.56
CHD2-223ENST00000636306 FRMPD2Q68DX3 1309 aaPredicted RBP11.56□□□□□ -0.56
CHD2-223ENST00000636306 EYA4O95677 639 aa11.55□□□□□ -0.56
CHD2-223ENST00000636306 RPN1P04843 607 aaKnown RBP11.55□□□□□ -0.56
CHD2-223ENST00000636306 BPIFB4P59827 614 aa11.55□□□□□ -0.56
CHD2-223ENST00000636306 DHX9Q08211 1270 aaKnown RBP11.55□□□□□ -0.56
CHD2-223ENST00000636306 CNGA2Q16280 664 aa11.55□□□□□ -0.56
CHD2-223ENST00000636306 CERKLQ49MI3 558 aaPredicted RBP11.55□□□□□ -0.56
CHD2-223ENST00000636306 SPDYAQ5MJ70 313 aa11.55□□□□□ -0.56
CHD2-223ENST00000636306 RASIP1Q5U651 963 aa11.55□□□□□ -0.56
CHD2-223ENST00000636306 TAOK1Q7L7X3 1001 aa11.55□□□□□ -0.56
CHD2-223ENST00000636306 KRT26Q7Z3Y9 468 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms