RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.26■□□□□ 0.83
CLN6-210ENST00000635747 BDP1A6H8Y1 2624 aa20.26■□□□□ 0.83
CLN6-210ENST00000635747 KIAA1671Q9BY89 1806 aa20.25■□□□□ 0.83
CLN6-210ENST00000635747 FSCN2O14926 492 aa20.25■□□□□ 0.83
CLN6-210ENST00000635747 NRIP1P48552 1158 aa20.25■□□□□ 0.83
CLN6-210ENST00000635747 BCAR1P56945 870 aa20.25■□□□□ 0.83
CLN6-210ENST00000635747 MBTD1Q05BQ5 628 aa20.25■□□□□ 0.83
CLN6-210ENST00000635747 KRT79Q5XKE5 535 aa20.25■□□□□ 0.83
CLN6-210ENST00000635747 LARP1BQ659C4 914 aaKnown RBP20.25■□□□□ 0.83
CLN6-210ENST00000635747 AGMOQ6ZNB7 445 aa20.25■□□□□ 0.83
CLN6-210ENST00000635747 ADGRD2Q7Z7M1 963 aa20.25■□□□□ 0.83
CLN6-210ENST00000635747 ZBTB8OSQ8IWT0 167 aa20.25■□□□□ 0.83
CLN6-210ENST00000635747 SLC39A11Q8N1S5 342 aa20.25■□□□□ 0.83
CLN6-210ENST00000635747 TMEM169Q96HH4 297 aa20.25■□□□□ 0.83
CLN6-210ENST00000635747 CSRNP2Q9H175 543 aa20.25■□□□□ 0.83
CLN6-210ENST00000635747 C2orf40Q9H1Z8 148 aa20.25■□□□□ 0.83
CLN6-210ENST00000635747 RSAD1Q9HA92 442 aa20.25■□□□□ 0.83
CLN6-210ENST00000635747 ENTPD7Q9NQZ7 604 aa20.25■□□□□ 0.83
CLN6-210ENST00000635747 TBC1D13Q9NVG8 400 aa20.25■□□□□ 0.83
CLN6-210ENST00000635747 STK39Q9UEW8 545 aa20.25■□□□□ 0.83
CLN6-210ENST00000635747 TCF20Q9UGU0 1960 aaKnown RBP20.25■□□□□ 0.83
CLN6-210ENST00000635747 LRRIQ4A6NIV6 560 aa20.24■□□□□ 0.83
CLN6-210ENST00000635747 ZC3H11AO75152 810 aaKnown RBP eCLIP20.24■□□□□ 0.83
CLN6-210ENST00000635747 ITGA4P13612 1032 aa20.24■□□□□ 0.83
CLN6-210ENST00000635747 GTF2F1P35269 517 aaKnown RBP eCLIP20.24■□□□□ 0.831e-6■■■■□ 26
CLN6-210ENST00000635747 NDUFV1P49821 464 aa20.24■□□□□ 0.83
CLN6-210ENST00000635747 ERVFC1P60507 584 aa20.24■□□□□ 0.83
CLN6-210ENST00000635747 PPP2R5AQ15172 486 aa20.24■□□□□ 0.83
CLN6-210ENST00000635747 LONRF3Q496Y0 759 aa20.24■□□□□ 0.83
CLN6-210ENST00000635747 UBXN11Q5T124 520 aa20.24■□□□□ 0.83
CLN6-210ENST00000635747 MAEAQ7L5Y9 396 aa20.24■□□□□ 0.83
CLN6-210ENST00000635747 TMC7Q7Z402 723 aa20.24■□□□□ 0.83
CLN6-210ENST00000635747 RBM23Q86U06 439 aaKnown RBP20.24■□□□□ 0.83
CLN6-210ENST00000635747 FAM178BQ8IXR5 827 aa20.24■□□□□ 0.83
CLN6-210ENST00000635747 SNX29Q8TEQ0 813 aa20.24■□□□□ 0.83
CLN6-210ENST00000635747 PRIMPOLQ96LW4 560 aa20.24■□□□□ 0.83
CLN6-210ENST00000635747 TCF25Q9BQ70 676 aa20.24■□□□□ 0.83
CLN6-210ENST00000635747 TRIM6Q9C030 488 aaPredicted RBP20.24■□□□□ 0.83
CLN6-210ENST00000635747 PRMT7Q9NVM4 692 aaPredicted RBP20.24■□□□□ 0.83
CLN6-210ENST00000635747 PRKAG3Q9UGI9 489 aa20.24■□□□□ 0.83
CLN6-210ENST00000635747 DNM3Q9UQ16 869 aa20.24■□□□□ 0.83
CLN6-210ENST00000635747 INPP5FQ9Y2H2 1132 aa20.24■□□□□ 0.83
CLN6-210ENST00000635747 ARID2Q68CP9 1835 aa20.24■□□□□ 0.83
CLN6-210ENST00000635747 SRGAP2BP0DMP2 458 aa20.23■□□□□ 0.83
CLN6-210ENST00000635747 PBX3P40426 434 aa20.23■□□□□ 0.83
CLN6-210ENST00000635747 AMHR2Q16671 573 aa20.23■□□□□ 0.83
CLN6-210ENST00000635747 KCTD17Q8N5Z5 321 aa20.23■□□□□ 0.83
CLN6-210ENST00000635747 KIFAP3Q92845 792 aa20.23■□□□□ 0.83
CLN6-210ENST00000635747 IFT74Q96LB3 600 aa20.23■□□□□ 0.83
CLN6-210ENST00000635747 FAM193BQ96PV7 902 aaPredicted RBP20.23■□□□□ 0.83
CLN6-210ENST00000635747 BACH2Q9BYV9 841 aa20.23■□□□□ 0.83
CLN6-210ENST00000635747 NRDE2Q9H7Z3 1164 aa20.23■□□□□ 0.83
CLN6-210ENST00000635747 GPRC5CQ9NQ84 441 aa20.23■□□□□ 0.83
CLN6-210ENST00000635747 DDX19AQ9NUU7 478 aaKnown RBP20.23■□□□□ 0.83
CLN6-210ENST00000635747 CD207Q9UJ71 328 aa20.23■□□□□ 0.83
CLN6-210ENST00000635747 KIAA1024Q9UPX6 916 aa20.23■□□□□ 0.83
CLN6-210ENST00000635747 IPPQ9Y573 584 aa20.23■□□□□ 0.83
CLN6-210ENST00000635747 MEIS3P2A8K0S8 358 aa20.22■□□□□ 0.83
CLN6-210ENST00000635747 IL9P15248 144 aa20.22■□□□□ 0.83
CLN6-210ENST00000635747 ARF4P18085 180 aaPredicted RBP20.22■□□□□ 0.83
CLN6-210ENST00000635747 NAMPTP43490 491 aa20.22■□□□□ 0.83
CLN6-210ENST00000635747 ATP2C1P98194 919 aaPredicted RBP20.22■□□□□ 0.83
CLN6-210ENST00000635747 DLX2Q07687 328 aaPredicted RBP20.22■□□□□ 0.83
CLN6-210ENST00000635747 SMC1AQ14683 1233 aaKnown RBP20.22■□□□□ 0.83
CLN6-210ENST00000635747 DUSP6Q16828 381 aa20.22■□□□□ 0.83
CLN6-210ENST00000635747 FAM187BQ17R55 369 aa20.22■□□□□ 0.83
CLN6-210ENST00000635747 PLPP4Q5VZY2 271 aa20.22■□□□□ 0.83
CLN6-210ENST00000635747 ARL6IP4Q66PJ3 421 aaKnown RBP20.22■□□□□ 0.83
CLN6-210ENST00000635747 CDCA2Q69YH5 1023 aaPredicted RBP20.22■□□□□ 0.83
CLN6-210ENST00000635747 SLC27A1Q6PCB7 646 aa20.22■□□□□ 0.83
CLN6-210ENST00000635747 PPP4R3CPQ6ZMV5 832 aa20.22■□□□□ 0.83
CLN6-210ENST00000635747 CPB2Q96IY4 423 aa20.22■□□□□ 0.83
CLN6-210ENST00000635747 BHMT2Q9H2M3 363 aa20.22■□□□□ 0.83
CLN6-210ENST00000635747 A0A1B0GUA9 196 aa20.21■□□□□ 0.83
CLN6-210ENST00000635747 LINC01565O15544 149 aa20.21■□□□□ 0.83
CLN6-210ENST00000635747 TBX10O75333 385 aa20.21■□□□□ 0.83
CLN6-210ENST00000635747 EYA4O95677 639 aa20.21■□□□□ 0.83
CLN6-210ENST00000635747 ALDH2P05091 517 aa20.21■□□□□ 0.83
CLN6-210ENST00000635747 GALTP07902 379 aa20.21■□□□□ 0.83
CLN6-210ENST00000635747 PDCP20941 246 aa20.21■□□□□ 0.83
CLN6-210ENST00000635747 EFNA5P52803 228 aa20.21■□□□□ 0.83
CLN6-210ENST00000635747 SMAD4Q13485 552 aaKnown RBP20.21■□□□□ 0.83
CLN6-210ENST00000635747 CUL4AQ13619 759 aa20.21■□□□□ 0.83
CLN6-210ENST00000635747 ECM1Q16610 540 aa20.21■□□□□ 0.83
CLN6-210ENST00000635747 MAPK6Q16659 721 aa20.21■□□□□ 0.83
CLN6-210ENST00000635747 BRAPQ7Z569 592 aa20.21■□□□□ 0.83
CLN6-210ENST00000635747 SMG8Q8ND04 991 aaKnown RBP20.21■□□□□ 0.83
CLN6-210ENST00000635747 IGSF21Q96ID5 467 aa20.21■□□□□ 0.83
CLN6-210ENST00000635747 MSLNLQ96KJ4 702 aa20.21■□□□□ 0.83
CLN6-210ENST00000635747 TMEM175Q9BSA9 504 aa20.21■□□□□ 0.83
CLN6-210ENST00000635747 FZD8Q9H461 694 aa20.21■□□□□ 0.83
CLN6-210ENST00000635747 GIT1Q9Y2X7 761 aa20.21■□□□□ 0.83
CLN6-210ENST00000635747 PCDHGC5Q9Y5F6 944 aa20.21■□□□□ 0.83
CLN6-210ENST00000635747 PLXNA4Q9HCM2 1894 aa20.2■□□□□ 0.82
CLN6-210ENST00000635747 NT5C1B-RDH14C9J2C7 533 aa20.2■□□□□ 0.82
CLN6-210ENST00000635747 PER2O15055 1255 aa20.2■□□□□ 0.82
CLN6-210ENST00000635747 INPPL1O15357 1258 aa20.2■□□□□ 0.82
CLN6-210ENST00000635747 MBTPS2O43462 519 aa20.2■□□□□ 0.82
CLN6-210ENST00000635747 COASYQ13057 564 aa20.2■□□□□ 0.82
CLN6-210ENST00000635747 GIT2Q14161 759 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms