RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 NALCNQ8IZF0 1738 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 hCG_2014768A0A024R1R8 64 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 IQCA1LA6NCM1 817 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 KIAA0355O15063 1070 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 SUSD5O60279 629 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 DNAJC6O75061 913 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 MPIG6BO95866 241 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 PTTG1IPP53801 180 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 GYS2P54840 703 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 IGBP1P78318 339 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 STILQ15468 1287 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 TCEA2Q15560 299 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 TAF7LQ5H9L4 462 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 ZC3H12BQ5HYM0 836 aaKnown RBP3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 KCNT2Q6UVM3 1135 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 LRSAM1Q6UWE0 723 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 LRRC47Q8N1G4 583 aaKnown RBP3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 ZSWIM2Q8NEG5 633 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 HAS1Q92839 578 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 SGSM3Q96HU1 749 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 CCDC140Q96MF4 163 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 PHF20Q9BVI0 1012 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 SPATA9Q9BWV2 254 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 AMNQ9BXJ7 453 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 GPR27Q9NS67 375 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 RGS17Q9UGC6 210 aaPredicted RBP3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 TRPS1Q9UHF7 1281 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 PFDN2Q9UHV9 154 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 PTCH2Q9Y6C5 1203 aa3.45□□□□□ -1.86
SMARCB1-208ENST00000634926 XDHP47989 1333 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 WASHC2CQ9Y4E1 1318 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 ADAMTS13Q76LX8 1427 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 A0A0A6YYK5 440 aaPredicted RBP3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 CCDC163A0A0D9SF12 145 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 GRXCR1A8MXD5 290 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 ADCY3O60266 1144 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 DLX3O60479 287 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 GNAT1P11488 350 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 GRK2P25098 689 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 GRK3P35626 688 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 STAT5BP51692 787 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 CD83Q01151 205 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 SLC10A6Q3KNW5 377 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 EPHA10Q5JZY3 1008 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 C1QL3Q5VWW1 255 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 ZBTB38Q8NAP3 1195 aaPredicted RBP3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 BEND2Q8NDZ0 799 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 LENG9Q96B70 501 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 PCDH12Q9NPG4 1184 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 BTBD7Q9P203 1132 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 LRP2BPQ9P2M1 347 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 PLAAQ9Y263 795 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 COL4A3BPQ9Y5P4 624 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 UTRNP46939 3433 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 TRPM2O94759 1503 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 DCCP43146 1447 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 NCOA3Q9Y6Q9 1424 aa3.44□□□□□ -1.86
SMARCB1-208ENST00000634926 TMEM94Q12767 1356 aa3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 PLEKHG1Q9ULL1 1385 aa3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 KLRG2A4D1S0 409 aaPredicted RBP3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 AGRPO00253 132 aa3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 CYP27B1O15528 508 aa3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 TOM1O60784 492 aa3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 FAM153BP0C7A2 387 aa3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 NAT2P11245 290 aa3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 PTH2RP49190 550 aa3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 RABGGTBP53611 331 aa3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 ANAPC15P60006 121 aa3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 NTRK3Q16288 839 aa3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 TKFCQ3LXA3 575 aa3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 ZNF362Q5T0B9 420 aaPredicted RBP3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 KANK2Q63ZY3 851 aa3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 DPP8Q6V1X1 898 aaPredicted RBP3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 LBX2Q6XYB7 198 aa3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 BCL6BQ8N143 479 aaPredicted RBP3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 SLC25A43Q8WUT9 341 aaPredicted RBP3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 WNK4Q96J92 1243 aa3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 MSL2Q9HCI7 577 aa3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 HS3ST4Q9Y661 456 aa3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 CLTCL1P53675 1640 aa3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 COL22A1Q8NFW1 1626 aaPredicted RBP3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 NEXMIFQ5QGS0 1516 aa3.43□□□□□ -1.86
SMARCB1-208ENST00000634926 CDK12Q9NYV4 1490 aaPredicted RBP3.42□□□□□ -1.86
SMARCB1-208ENST00000634926 IFT172Q9UG01 1749 aa3.42□□□□□ -1.86
SMARCB1-208ENST00000634926 ROCK1Q13464 1354 aa3.42□□□□□ -1.86
SMARCB1-208ENST00000634926 PMS2P1A4D2B8 440 aa3.42□□□□□ -1.86
SMARCB1-208ENST00000634926 ZNF185O15231 689 aa3.42□□□□□ -1.86
SMARCB1-208ENST00000634926 RFPL3O75679 317 aa3.42□□□□□ -1.86
SMARCB1-208ENST00000634926 RHOBTB3O94955 611 aa3.42□□□□□ -1.86
SMARCB1-208ENST00000634926 ASMTLO95671 621 aa3.42□□□□□ -1.86
SMARCB1-208ENST00000634926 VIL1P09327 827 aaKnown RBP3.42□□□□□ -1.86
SMARCB1-208ENST00000634926 PTPN1P18031 435 aaKnown RBP3.42□□□□□ -1.86
SMARCB1-208ENST00000634926 MASP1P48740 699 aa3.42□□□□□ -1.86
SMARCB1-208ENST00000634926 ADAM8P78325 824 aa3.42□□□□□ -1.86
SMARCB1-208ENST00000634926 CNGB1Q14028 1251 aaPredicted RBP3.42□□□□□ -1.86
SMARCB1-208ENST00000634926 DALRD3Q5D0E6 543 aaKnown RBP3.42□□□□□ -1.86
SMARCB1-208ENST00000634926 BTBD8Q5XKL5 378 aa3.42□□□□□ -1.86
SMARCB1-208ENST00000634926 TMEM200BQ69YZ2 307 aa3.42□□□□□ -1.86
SMARCB1-208ENST00000634926 USP53Q70EK8 1073 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms