RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 LRRC55Q6ZSA7 311 aa17.34■□□□□ 0.37
LINC00339-207ENST00000634712 KCNK18Q7Z418 384 aa17.34■□□□□ 0.37
LINC00339-207ENST00000634712 MRPL10Q7Z7H8 261 aaKnown RBP17.34■□□□□ 0.37
LINC00339-207ENST00000634712 SPRYD3Q8NCJ5 442 aa17.34■□□□□ 0.37
LINC00339-207ENST00000634712 URGCPQ8TCY9 931 aa17.34■□□□□ 0.37
LINC00339-207ENST00000634712 MICAL1Q8TDZ2 1067 aa17.34■□□□□ 0.37
LINC00339-207ENST00000634712 POF1BQ8WVV4 589 aa17.34■□□□□ 0.37
LINC00339-207ENST00000634712 BSNDQ8WZ55 320 aa17.34■□□□□ 0.37
LINC00339-207ENST00000634712 PPP2R3CQ969Q6 453 aa17.34■□□□□ 0.37
LINC00339-207ENST00000634712 PRIMPOLQ96LW4 560 aa17.34■□□□□ 0.37
LINC00339-207ENST00000634712 ZNF558Q96NG5 402 aa17.34■□□□□ 0.37
LINC00339-207ENST00000634712 PNMA5Q96PV4 448 aa17.34■□□□□ 0.37
LINC00339-207ENST00000634712 TIPINQ9BVW5 301 aa17.34■□□□□ 0.37
LINC00339-207ENST00000634712 HCSTQ9UBK5 93 aa17.34■□□□□ 0.37
LINC00339-207ENST00000634712 PUF60Q9UHX1 559 aaKnown RBP17.34■□□□□ 0.37
LINC00339-207ENST00000634712 CCDC169A6NNP5 214 aa17.33■□□□□ 0.36
LINC00339-207ENST00000634712 HIP1RO75146 1068 aa17.33■□□□□ 0.36
LINC00339-207ENST00000634712 OFD1O75665 1012 aa17.33■□□□□ 0.36
LINC00339-207ENST00000634712 FGF18O76093 207 aa17.33■□□□□ 0.36
LINC00339-207ENST00000634712 PLA2G4BP0C869 781 aa17.33■□□□□ 0.36
LINC00339-207ENST00000634712 NCLP19338 710 aaKnown RBP17.33■□□□□ 0.36
LINC00339-207ENST00000634712 MARCKSP29966 332 aaPredicted RBP17.33■□□□□ 0.36
LINC00339-207ENST00000634712 PPM1AP35813 382 aa17.33■□□□□ 0.36
LINC00339-207ENST00000634712 ALDH7A1P49419 539 aaKnown RBP17.33■□□□□ 0.36
LINC00339-207ENST00000634712 EFNA5P52803 228 aa17.33■□□□□ 0.36
LINC00339-207ENST00000634712 KRT17Q04695 432 aa17.33■□□□□ 0.36
LINC00339-207ENST00000634712 UBE3AQ05086 875 aa17.33■□□□□ 0.36
LINC00339-207ENST00000634712 PRPF4BQ13523 1007 aaKnown RBP17.33■□□□□ 0.36
LINC00339-207ENST00000634712 AMHR2Q16671 573 aa17.33■□□□□ 0.36
LINC00339-207ENST00000634712 UBXN11Q5T124 520 aa17.33■□□□□ 0.36
LINC00339-207ENST00000634712 SLC27A1Q6PCB7 646 aa17.33■□□□□ 0.36
LINC00339-207ENST00000634712 KCNT2Q6UVM3 1135 aa17.33■□□□□ 0.36
LINC00339-207ENST00000634712 SYT2Q8N9I0 419 aaPredicted RBP17.33■□□□□ 0.36
LINC00339-207ENST00000634712 FAM193BQ96PV7 902 aaPredicted RBP17.33■□□□□ 0.36
LINC00339-207ENST00000634712 FZD8Q9H461 694 aa17.33■□□□□ 0.36
LINC00339-207ENST00000634712 RSAD1Q9HA92 442 aa17.33■□□□□ 0.36
LINC00339-207ENST00000634712 KANSL3Q9P2N6 904 aa17.33■□□□□ 0.36
LINC00339-207ENST00000634712 CNTNAP2Q9UHC6 1331 aa17.33■□□□□ 0.36
LINC00339-207ENST00000634712 UNC80Q8N2C7 3258 aa17.33■□□□□ 0.36
LINC00339-207ENST00000634712 CARNS1A5YM72 827 aa17.32■□□□□ 0.36
LINC00339-207ENST00000634712 B4GALT5O43286 388 aa17.32■□□□□ 0.36
LINC00339-207ENST00000634712 PRKCBP05771 671 aa17.32■□□□□ 0.36
LINC00339-207ENST00000634712 PEX3P56589 373 aa17.32■□□□□ 0.36
LINC00339-207ENST00000634712 DMP1Q13316 513 aaPredicted RBP17.32■□□□□ 0.36
LINC00339-207ENST00000634712 FAM187BQ17R55 369 aa17.32■□□□□ 0.36
LINC00339-207ENST00000634712 TCEAL5Q5H9L2 206 aa17.32■□□□□ 0.36
LINC00339-207ENST00000634712 PPP4R3CPQ6ZMV5 832 aa17.32■□□□□ 0.36
LINC00339-207ENST00000634712 AGMOQ6ZNB7 445 aa17.32■□□□□ 0.36
LINC00339-207ENST00000634712 EP400NLQ6ZTU2 488 aa17.32■□□□□ 0.36
LINC00339-207ENST00000634712 C1orf186Q6ZWK4 172 aa17.32■□□□□ 0.36
LINC00339-207ENST00000634712 ZNF396Q96N95 335 aaPredicted RBP17.32■□□□□ 0.36
LINC00339-207ENST00000634712 RUSC1Q9BVN2 902 aa17.32■□□□□ 0.36
LINC00339-207ENST00000634712 EIF2AQ9BY44 585 aaKnown RBP17.32■□□□□ 0.36
LINC00339-207ENST00000634712 SPG21Q9NZD8 308 aa17.32■□□□□ 0.36
LINC00339-207ENST00000634712 KCNG1Q9UIX4 513 aa17.32■□□□□ 0.36
LINC00339-207ENST00000634712 IPPQ9Y573 584 aa17.32■□□□□ 0.36
LINC00339-207ENST00000634712 A0A0C4DFX4 3053 aa17.32■□□□□ 0.36
LINC00339-207ENST00000634712 A0A1B0GUA9 196 aa17.31■□□□□ 0.36
LINC00339-207ENST00000634712 MEIS3P2A8K0S8 358 aa17.31■□□□□ 0.36
LINC00339-207ENST00000634712 K7ERI5 159 aa17.31■□□□□ 0.36
LINC00339-207ENST00000634712 ACKR2O00590 384 aa17.31■□□□□ 0.36
LINC00339-207ENST00000634712 N4BP3O15049 544 aa17.31■□□□□ 0.36
LINC00339-207ENST00000634712 NCK2O43639 380 aa17.31■□□□□ 0.36
LINC00339-207ENST00000634712 ZC3H11AO75152 810 aaKnown RBP eCLIP17.31■□□□□ 0.36
LINC00339-207ENST00000634712 NPTXRO95502 500 aa17.31■□□□□ 0.36
LINC00339-207ENST00000634712 GUCY2CP25092 1073 aa17.31■□□□□ 0.36
LINC00339-207ENST00000634712 TXLNAP40222 546 aa17.31■□□□□ 0.36
LINC00339-207ENST00000634712 GRIN1Q05586 938 aa17.31■□□□□ 0.36
LINC00339-207ENST00000634712 RAD51AP2Q09MP3 1159 aa17.31■□□□□ 0.36
LINC00339-207ENST00000634712 DHX8Q14562 1220 aaKnown RBP17.31■□□□□ 0.36
LINC00339-207ENST00000634712 PTPAQ15257 358 aa17.31■□□□□ 0.36
LINC00339-207ENST00000634712 TMEM119Q4V9L6 283 aa17.31■□□□□ 0.36
LINC00339-207ENST00000634712 TJAP1Q5JTD0 557 aa17.31■□□□□ 0.36
LINC00339-207ENST00000634712 FOXD4L5Q5VV16 416 aaPredicted RBP17.31■□□□□ 0.36
LINC00339-207ENST00000634712 CDR2LQ86X02 465 aaPredicted RBP17.31■□□□□ 0.36
LINC00339-207ENST00000634712 SMG8Q8ND04 991 aaKnown RBP17.31■□□□□ 0.36
LINC00339-207ENST00000634712 FOXD4L4Q8WXT5 416 aaPredicted RBP17.31■□□□□ 0.36
LINC00339-207ENST00000634712 SYMPKQ92797 1274 aaKnown RBP17.31■□□□□ 0.36
LINC00339-207ENST00000634712 ASB2Q96Q27 587 aa17.31■□□□□ 0.36
LINC00339-207ENST00000634712 ADPGKQ9BRR6 497 aa17.31■□□□□ 0.36
LINC00339-207ENST00000634712 APOL6Q9BWW8 343 aa17.31■□□□□ 0.36
LINC00339-207ENST00000634712 GBP3Q9H0R5 595 aa17.31■□□□□ 0.36
LINC00339-207ENST00000634712 C17orf75Q9HAS0 396 aa17.31■□□□□ 0.36
LINC00339-207ENST00000634712 KMT5AQ9NQR1 393 aa17.31■□□□□ 0.36
LINC00339-207ENST00000634712 KCND2Q9NZV8 630 aa17.31■□□□□ 0.36
LINC00339-207ENST00000634712 CCDC39Q9UFE4 941 aa17.31■□□□□ 0.36
LINC00339-207ENST00000634712 SRPRBQ9Y5M8 271 aaKnown RBP17.31■□□□□ 0.36
LINC00339-207ENST00000634712 KIAA1671Q9BY89 1806 aa17.3■□□□□ 0.36
LINC00339-207ENST00000634712 DNAJB1P25685 340 aa17.3■□□□□ 0.36
LINC00339-207ENST00000634712 PBX3P40426 434 aa17.3■□□□□ 0.36
LINC00339-207ENST00000634712 SLC12A3P55017 1021 aa17.3■□□□□ 0.36
LINC00339-207ENST00000634712 BCAR1P56945 870 aa17.3■□□□□ 0.36
LINC00339-207ENST00000634712 PLCB3Q01970 1234 aa17.3■□□□□ 0.36
LINC00339-207ENST00000634712 KARSQ15046 597 aaKnown RBP17.3■□□□□ 0.36
LINC00339-207ENST00000634712 STK38Q15208 465 aa17.3■□□□□ 0.36
LINC00339-207ENST00000634712 MRPS27Q92552 414 aaKnown RBP17.3■□□□□ 0.36
LINC00339-207ENST00000634712 USP28Q96RU2 1077 aa17.3■□□□□ 0.36
LINC00339-207ENST00000634712 KIFC3Q9BVG8 833 aa17.3■□□□□ 0.36
LINC00339-207ENST00000634712 IGFLR1Q9H665 355 aa17.3■□□□□ 0.36
LINC00339-207ENST00000634712 TLR9Q9NR96 1032 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms