RNA–Protein interactions for RNA: ENST00000625664.2

USP8-219, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5 BASIC

Gene USP8, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-219ENST00000625664 STK24Q9Y6E0 443 aa13.96□□□□□ -0.17
USP8-219ENST00000625664 BDP1A6H8Y1 2624 aa13.96□□□□□ -0.17
USP8-219ENST00000625664 VWA3AA6NCI4 1184 aa13.96□□□□□ -0.18
USP8-219ENST00000625664 NT5C1B-RDH14C9J2C7 533 aa13.96□□□□□ -0.18
USP8-219ENST00000625664 E9PMD0 336 aa13.96□□□□□ -0.18
USP8-219ENST00000625664 ZC3H11AO75152 810 aaKnown RBP eCLIP13.96□□□□□ -0.18
USP8-219ENST00000625664 OFD1O75665 1012 aa13.96□□□□□ -0.18
USP8-219ENST00000625664 ARF4P18085 180 aaPredicted RBP13.96□□□□□ -0.18
USP8-219ENST00000625664 AXLP30530 894 aa13.96□□□□□ -0.18
USP8-219ENST00000625664 UBE3AQ05086 875 aa13.96□□□□□ -0.18
USP8-219ENST00000625664 NOMO2Q5JPE7 1267 aa13.96□□□□□ -0.18
USP8-219ENST00000625664 MRPL10Q7Z7H8 261 aaKnown RBP13.96□□□□□ -0.18
USP8-219ENST00000625664 CDR2LQ86X02 465 aaPredicted RBP13.96□□□□□ -0.18
USP8-219ENST00000625664 ZBTB8OSQ8IWT0 167 aa13.96□□□□□ -0.18
USP8-219ENST00000625664 MRPS27Q92552 414 aaKnown RBP13.96□□□□□ -0.18
USP8-219ENST00000625664 PPP2R3CQ969Q6 453 aa13.96□□□□□ -0.18
USP8-219ENST00000625664 NFKBIZQ9BYH8 718 aa13.96□□□□□ -0.18
USP8-219ENST00000625664 GBP3Q9H0R5 595 aa13.96□□□□□ -0.18
USP8-219ENST00000625664 RSAD1Q9HA92 442 aa13.96□□□□□ -0.18
USP8-219ENST00000625664 TBC1D13Q9NVG8 400 aa13.96□□□□□ -0.18
USP8-219ENST00000625664 SPG21Q9NZD8 308 aa13.96□□□□□ -0.18
USP8-219ENST00000625664 K7ELQ4 463 aaPredicted RBP13.95□□□□□ -0.18
USP8-219ENST00000625664 LINC01565O15544 149 aa13.95□□□□□ -0.18
USP8-219ENST00000625664 EYA4O95677 639 aa13.95□□□□□ -0.18
USP8-219ENST00000625664 LIG1P18858 919 aa13.95□□□□□ -0.18
USP8-219ENST00000625664 PDCP20941 246 aa13.95□□□□□ -0.18
USP8-219ENST00000625664 PPM1AP35813 382 aa13.95□□□□□ -0.18
USP8-219ENST00000625664 NRIP1P48552 1158 aa13.95□□□□□ -0.18
USP8-219ENST00000625664 AFF1P51825 1210 aaKnown RBP13.95□□□□□ -0.18
USP8-219ENST00000625664 BCAR1P56945 870 aa13.95□□□□□ -0.18
USP8-219ENST00000625664 ERVFC1P60507 584 aa13.95□□□□□ -0.18
USP8-219ENST00000625664 RNASELQ05823 741 aaKnown RBP13.95□□□□□ -0.18
USP8-219ENST00000625664 COL19A1Q14993 1142 aa13.95□□□□□ -0.18
USP8-219ENST00000625664 PCBP1Q15365 356 aaKnown RBP eCLIP13.95□□□□□ -0.18
USP8-219ENST00000625664 NFKBIBQ15653 356 aa13.95□□□□□ -0.18
USP8-219ENST00000625664 LEXMQ3ZCV2 418 aa13.95□□□□□ -0.18
USP8-219ENST00000625664 KCNK18Q7Z418 384 aa13.95□□□□□ -0.18
USP8-219ENST00000625664 BRAPQ7Z569 592 aa13.95□□□□□ -0.18
USP8-219ENST00000625664 RBM23Q86U06 439 aaKnown RBP13.95□□□□□ -0.18
USP8-219ENST00000625664 SLC39A11Q8N1S5 342 aa13.95□□□□□ -0.18
USP8-219ENST00000625664 SPRYD3Q8NCJ5 442 aa13.95□□□□□ -0.18
USP8-219ENST00000625664 SMG8Q8ND04 991 aaKnown RBP13.95□□□□□ -0.18
USP8-219ENST00000625664 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.95□□□□□ -0.18
USP8-219ENST00000625664 CCDC51Q96ER9 411 aa13.95□□□□□ -0.18
USP8-219ENST00000625664 PLIN2Q99541 437 aa13.95□□□□□ -0.18
USP8-219ENST00000625664 APOL6Q9BWW8 343 aa13.95□□□□□ -0.18
USP8-219ENST00000625664 CSRNP2Q9H175 543 aa13.95□□□□□ -0.18
USP8-219ENST00000625664 DNM3Q9UQ16 869 aa13.95□□□□□ -0.18
USP8-219ENST00000625664 HES2Q9Y543 173 aa13.95□□□□□ -0.18
USP8-219ENST00000625664 IPPQ9Y573 584 aa13.95□□□□□ -0.18
USP8-219ENST00000625664 ITGA4P13612 1032 aa13.94□□□□□ -0.18
USP8-219ENST00000625664 NCLP19338 710 aaKnown RBP13.94□□□□□ -0.18
USP8-219ENST00000625664 LTBRP36941 435 aa13.94□□□□□ -0.18
USP8-219ENST00000625664 ALDH7A1P49419 539 aaKnown RBP13.94□□□□□ -0.18
USP8-219ENST00000625664 PLCB3Q01970 1234 aa13.94□□□□□ -0.18
USP8-219ENST00000625664 DLX2Q07687 328 aaPredicted RBP13.94□□□□□ -0.18
USP8-219ENST00000625664 CLUL1Q15846 466 aa13.94□□□□□ -0.18
USP8-219ENST00000625664 CTC1Q2NKJ3 1217 aa13.94□□□□□ -0.18
USP8-219ENST00000625664 PLPP4Q5VZY2 271 aa13.94□□□□□ -0.18
USP8-219ENST00000625664 ARL6IP4Q66PJ3 421 aaKnown RBP13.94□□□□□ -0.18
USP8-219ENST00000625664 CDCA2Q69YH5 1023 aaPredicted RBP13.94□□□□□ -0.18
USP8-219ENST00000625664 DEPTORQ8TB45 409 aa13.94□□□□□ -0.18
USP8-219ENST00000625664 URGCPQ8TCY9 931 aa13.94□□□□□ -0.18
USP8-219ENST00000625664 KIFC3Q9BVG8 833 aa13.94□□□□□ -0.18
USP8-219ENST00000625664 TRIM6Q9C030 488 aaPredicted RBP13.94□□□□□ -0.18
USP8-219ENST00000625664 RNF39Q9H2S5 420 aa13.94□□□□□ -0.18
USP8-219ENST00000625664 NRDE2Q9H7Z3 1164 aa13.94□□□□□ -0.18
USP8-219ENST00000625664 PRMT7Q9NVM4 692 aaPredicted RBP13.94□□□□□ -0.18
USP8-219ENST00000625664 PUF60Q9UHX1 559 aaKnown RBP13.94□□□□□ -0.18
USP8-219ENST00000625664 CNTNAP2Q9UHC6 1331 aa13.94□□□□□ -0.18
USP8-219ENST00000625664 NCK2O43639 380 aa13.93□□□□□ -0.18
USP8-219ENST00000625664 B4GALT3O60512 393 aa13.93□□□□□ -0.18
USP8-219ENST00000625664 TBX10O75333 385 aa13.93□□□□□ -0.18
USP8-219ENST00000625664 NPTXRO95502 500 aa13.93□□□□□ -0.18
USP8-219ENST00000625664 SSBP05455 408 aaKnown RBP eCLIP13.93□□□□□ -0.18
USP8-219ENST00000625664 SYT1P21579 422 aa13.93□□□□□ -0.18
USP8-219ENST00000625664 NAMPTP43490 491 aa13.93□□□□□ -0.18
USP8-219ENST00000625664 KRT17Q04695 432 aa13.93□□□□□ -0.18
USP8-219ENST00000625664 PPP2R5AQ15172 486 aa13.93□□□□□ -0.18
USP8-219ENST00000625664 TMEM132AQ24JP5 1023 aa13.93□□□□□ -0.18
USP8-219ENST00000625664 PTCRAQ6ISU1 281 aaPredicted RBP13.93□□□□□ -0.18
USP8-219ENST00000625664 TMEM173Q86WV6 379 aaPredicted RBP13.93□□□□□ -0.18
USP8-219ENST00000625664 CNNM3Q8NE01 707 aa13.93□□□□□ -0.18
USP8-219ENST00000625664 RSPH1Q8WYR4 309 aa13.93□□□□□ -0.18
USP8-219ENST00000625664 IFT74Q96LB3 600 aa13.93□□□□□ -0.18
USP8-219ENST00000625664 PNMA5Q96PV4 448 aa13.93□□□□□ -0.18
USP8-219ENST00000625664 TCF25Q9BQ70 676 aa13.93□□□□□ -0.18
USP8-219ENST00000625664 RUSC1Q9BVN2 902 aa13.93□□□□□ -0.18
USP8-219ENST00000625664 C2orf40Q9H1Z8 148 aa13.93□□□□□ -0.18
USP8-219ENST00000625664 NXF3Q9H4D5 531 aaKnown RBP13.93□□□□□ -0.18
USP8-219ENST00000625664 TLE6Q9H808 572 aa13.93□□□□□ -0.18
USP8-219ENST00000625664 ENTPD7Q9NQZ7 604 aa13.93□□□□□ -0.18
USP8-219ENST00000625664 DNAJB4Q9UDY4 337 aa13.93□□□□□ -0.18
USP8-219ENST00000625664 LZTS1Q9Y250 596 aa13.93□□□□□ -0.18
USP8-219ENST00000625664 USP20Q9Y2K6 914 aa13.93□□□□□ -0.18
USP8-219ENST00000625664 TTLL13PA6NNM8 815 aa13.92□□□□□ -0.18
USP8-219ENST00000625664 TNFRSF10AO00220 468 aa13.92□□□□□ -0.18
USP8-219ENST00000625664 PER2O15055 1255 aa13.92□□□□□ -0.18
USP8-219ENST00000625664 POMCP01189 267 aa13.92□□□□□ -0.18
USP8-219ENST00000625664 PRKCBP05771 671 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms