RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, human

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00963-215	ENST00000622972	GPR182	O15218	404 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	GRM6	O15303	877 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	NCK2	O43639	380 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	GAS7	O60861	476 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	DGKI	O75912	1065 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	VTN	P04004	478 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	XBP1	P17861	261 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	CDC25A	P30304	524 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	NDUFV1	P49821	464 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	ATP2C1	P98194	919 aa	Predicted RBP	6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	NR1H3	Q13133	447 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	TRIM29	Q14134	588 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	KIZ	Q2M2Z5	673 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	ZNF746	Q6NUN9	644 aa	Predicted RBP	6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	KCNK18	Q7Z418	384 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	FAM178B	Q8IXR5	827 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	SMAP1	Q8IYB5	467 aa	Predicted RBP	6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	CMTR2	Q8IYT2	770 aa	Known RBP	6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	FAM122A	Q96E09	287 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	FAM167A	Q96KS9	214 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	OSMR	Q99650	979 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	ADAM2	Q99965	735 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	PLVAP	Q9BX97	442 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	TEKT3	Q9BXF9	490 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	ATP6V0A4	Q9HBG4	840 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	AAAS	Q9NRG9	546 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	NRBP2	Q9NSY0	501 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	RGL1	Q9NZL6	768 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	FBXO2	Q9UK22	296 aa	Predicted RBP	6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	NOC2L	Q9Y3T9	749 aa	Known RBP	6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	PCDHB12	Q9Y5F1	795 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	PCDHA10	Q9Y5I2	948 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	MRPL42	Q9Y6G3	142 aa	Known RBP	6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	PRUNE2	Q8WUY3	3088 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	EYS	Q5T1H1	3165 aa		6.57	□□□□□ -1.36
LINC00963-215	ENST00000622972	KDM3A	Q9Y4C1	1321 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	TTC3	P53804	2025 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972		A0A087X0B3	334 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	TBKBP1	A7MCY6	615 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	C5orf67	F2Z3F1	127 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	MAGEB2	O15479	319 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	MARCH6	O60337	910 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	NEMF	O60524	1076 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	MED24	O75448	989 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	OR52Z1	P0C646	297 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	SPATA31C1	P0DKV0	1188 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	GCFC2	P16383	781 aa	Known RBP	6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	ZSCAN20	P17040	1043 aa	Predicted RBP	6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	CA8	P35219	290 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	TRAPPC10	P48553	1259 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	NASP	P49321	788 aa	Predicted RBP	6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	SARS	P49591	514 aa	Known RBP	6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	GATM	P50440	423 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	CLCN3	P51790	818 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	CRYBB1	P53674	252 aa	Predicted RBP	6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	DNM1	Q05193	864 aa	Known RBP	6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	PPP2R5C	Q13362	524 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	SAFB	Q15424	915 aa	Known RBP eCLIP	6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	SF3A1	Q15459	793 aa	Known RBP	6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	NAALADL2	Q58DX5	795 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	LRCH2	Q5VUJ6	765 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	EFCAB12	Q6NXP0	572 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	RBM23	Q86U06	439 aa	Known RBP	6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	RTN4RL1	Q86UN2	441 aa	Predicted RBP	6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	THNSL1	Q8IYQ7	743 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	KIAA0319L	Q8IZA0	1049 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	ABI1	Q8IZP0	508 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	IGSF22	Q8N9C0	903 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	KLHL23	Q8NBE8	558 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	RNF169	Q8NCN4	708 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	FAM174A	Q8TBP5	190 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	ADAM32	Q8TC27	787 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	POF1B	Q8WVV4	589 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	LINC01599	Q8WXQ3	324 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	ZNF592	Q92610	1267 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	CLP1	Q92989	425 aa	Known RBP	6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	P2RX5	Q93086	422 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	ZNF689	Q96CS4	500 aa	Predicted RBP	6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	ZNF668	Q96K58	619 aa	Predicted RBP	6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	PNMA5	Q96PV4	448 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	RIT2	Q99578	217 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	SH2D3A	Q9BRG2	576 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	LRFN3	Q9BTN0	628 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	DISC1	Q9NRI5	854 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	C1orf112	Q9NSG2	853 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	TFIP11	Q9UBB9	837 aa	Known RBP	6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	ST3GAL5	Q9UNP4	418 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	PLAGL2	Q9UPG8	496 aa		6.56	□□□□□ -1.36
LINC00963-215	ENST00000622972	CHD9	Q3L8U1	2897 aa		6.55	□□□□□ -1.36
LINC00963-215	ENST00000622972	PI4K2B	G5E9Z4	385 aa		6.55	□□□□□ -1.36
LINC00963-215	ENST00000622972	TBX3	O15119	743 aa		6.55	□□□□□ -1.36
LINC00963-215	ENST00000622972	C22orf31	O95567	290 aa		6.55	□□□□□ -1.36
LINC00963-215	ENST00000622972	ITGB1	P05556	798 aa		6.55	□□□□□ -1.36
LINC00963-215	ENST00000622972	FBXO45	P0C2W1	286 aa		6.55	□□□□□ -1.36
LINC00963-215	ENST00000622972	ALAD	P13716	330 aa		6.55	□□□□□ -1.36
LINC00963-215	ENST00000622972	PDC	P20941	246 aa		6.55	□□□□□ -1.36
LINC00963-215	ENST00000622972	SFN	P31947	248 aa		6.55	□□□□□ -1.36
LINC00963-215	ENST00000622972	GTF2F1	P35269	517 aa	Known RBP eCLIP	6.55	□□□□□ -1.36	1e-6	■■■■■ 32
LINC00963-215	ENST00000622972	TXK	P42681	527 aa		6.55	□□□□□ -1.36
LINC00963-215	ENST00000622972	NRIP1	P48552	1158 aa		6.55	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms