RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 FLCNQ8NFG4 579 aa12.28□□□□□ -0.44
LINC00963-214ENST00000622680 CYP26B1Q9NR63 512 aa12.28□□□□□ -0.44
LINC00963-214ENST00000622680 AGPAT5Q9NUQ2 364 aa12.28□□□□□ -0.44
LINC00963-214ENST00000622680 WRAP73Q9P2S5 460 aaPredicted RBP12.28□□□□□ -0.44
LINC00963-214ENST00000622680 PCDHB2Q9Y5E7 798 aa12.28□□□□□ -0.44
LINC00963-214ENST00000622680 COL4A3BPQ9Y5P4 624 aa12.28□□□□□ -0.44
LINC00963-214ENST00000622680 TICRRQ7Z2Z1 1910 aa12.27□□□□□ -0.44
LINC00963-214ENST00000622680 CYP3A7-CYP3A51PA0A087WV96 503 aa12.27□□□□□ -0.45
LINC00963-214ENST00000622680 C2CD2LO14523 706 aa12.27□□□□□ -0.45
LINC00963-214ENST00000622680 ZNF623O75123 536 aa12.27□□□□□ -0.45
LINC00963-214ENST00000622680 POMCP01189 267 aa12.27□□□□□ -0.45
LINC00963-214ENST00000622680 MYBP10242 640 aa12.27□□□□□ -0.45
LINC00963-214ENST00000622680 SKIP12755 728 aa12.27□□□□□ -0.45
LINC00963-214ENST00000622680 CYP3A7P24462 503 aa12.27□□□□□ -0.45
LINC00963-214ENST00000622680 CLCN4P51793 760 aa12.27□□□□□ -0.45
LINC00963-214ENST00000622680 PSMC5P62195 406 aa12.27□□□□□ -0.45
LINC00963-214ENST00000622680 SSRP1Q08945 709 aaKnown RBP12.27□□□□□ -0.45
LINC00963-214ENST00000622680 STK3Q13188 491 aa12.27□□□□□ -0.45
LINC00963-214ENST00000622680 CCDC149Q6ZUS6 474 aa12.27□□□□□ -0.45
LINC00963-214ENST00000622680 FRMD5Q7Z6J6 570 aa12.27□□□□□ -0.45
LINC00963-214ENST00000622680 GPR149Q86SP6 731 aa12.27□□□□□ -0.45
LINC00963-214ENST00000622680 TRIM22Q8IYM9 498 aa12.27□□□□□ -0.45
LINC00963-214ENST00000622680 URGCPQ8TCY9 931 aa12.27□□□□□ -0.45
LINC00963-214ENST00000622680 TMEM143Q96AN5 459 aa12.27□□□□□ -0.45
LINC00963-214ENST00000622680 MBOAT7Q96N66 472 aa12.27□□□□□ -0.45
LINC00963-214ENST00000622680 KLHL5Q96PQ7 755 aa12.27□□□□□ -0.45
LINC00963-214ENST00000622680 INO80BQ9C086 356 aaPredicted RBP12.27□□□□□ -0.45
LINC00963-214ENST00000622680 IRF2BPLQ9H1B7 796 aa12.27□□□□□ -0.45
LINC00963-214ENST00000622680 RSAD1Q9HA92 442 aa12.27□□□□□ -0.45
LINC00963-214ENST00000622680 DDX25Q9UHL0 483 aaKnown RBP12.27□□□□□ -0.45
LINC00963-214ENST00000622680 VAV3Q9UKW4 847 aa12.27□□□□□ -0.45
LINC00963-214ENST00000622680 KCNJ14Q9UNX9 436 aa12.27□□□□□ -0.45
LINC00963-214ENST00000622680 USTQ9Y2C2 406 aa12.27□□□□□ -0.45
LINC00963-214ENST00000622680 KIF26AQ9ULI4 1882 aaPredicted RBP12.27□□□□□ -0.45
LINC00963-214ENST00000622680 SPTBN2O15020 2390 aa12.26□□□□□ -0.45
LINC00963-214ENST00000622680 PROB1E7EW31 1015 aa12.26□□□□□ -0.45
LINC00963-214ENST00000622680 F8W810 466 aa12.26□□□□□ -0.45
LINC00963-214ENST00000622680 NARSO43776 548 aaKnown RBP12.26□□□□□ -0.45
LINC00963-214ENST00000622680 N4BP1O75113 896 aaKnown RBP12.26□□□□□ -0.45
LINC00963-214ENST00000622680 DEXIO95424 95 aa12.26□□□□□ -0.45
LINC00963-214ENST00000622680 SRGAP2CP0DJJ0 459 aa12.26□□□□□ -0.45
LINC00963-214ENST00000622680 KLRC2P26717 231 aa12.26□□□□□ -0.45
LINC00963-214ENST00000622680 NBL1P41271 181 aa12.26□□□□□ -0.45
LINC00963-214ENST00000622680 NUBP1P53384 320 aa12.26□□□□□ -0.45
LINC00963-214ENST00000622680 EVCP57679 992 aa12.26□□□□□ -0.45
LINC00963-214ENST00000622680 CDC42EP1Q00587 391 aa12.26□□□□□ -0.45
LINC00963-214ENST00000622680 GIT2Q14161 759 aa12.26□□□□□ -0.45
LINC00963-214ENST00000622680 NONOQ15233 471 aaKnown RBP eCLIP12.26□□□□□ -0.454e-7■□□□□ 8.3
LINC00963-214ENST00000622680 LETM2Q2VYF4 491 aa12.26□□□□□ -0.45
LINC00963-214ENST00000622680 UBXN11Q5T124 520 aa12.26□□□□□ -0.45
LINC00963-214ENST00000622680 MOXD1Q6UVY6 613 aa12.26□□□□□ -0.45
LINC00963-214ENST00000622680 PLCD3Q8N3E9 789 aa12.26□□□□□ -0.45
LINC00963-214ENST00000622680 DAGLBQ8NCG7 672 aa12.26□□□□□ -0.45
LINC00963-214ENST00000622680 PRPF31Q8WWY3 499 aaKnown RBP12.26□□□□□ -0.45
LINC00963-214ENST00000622680 PGBD4Q96DM1 585 aa12.26□□□□□ -0.45
LINC00963-214ENST00000622680 C22orf23Q9BZE7 217 aa12.26□□□□□ -0.45
LINC00963-214ENST00000622680 SLKQ9H2G2 1235 aaPredicted RBP12.26□□□□□ -0.45
LINC00963-214ENST00000622680 MAN1C1Q9NR34 630 aa12.26□□□□□ -0.45
LINC00963-214ENST00000622680 MARCH5Q9NX47 278 aa12.26□□□□□ -0.45
LINC00963-214ENST00000622680 PRG3Q9Y2Y8 225 aaPredicted RBP12.26□□□□□ -0.45
LINC00963-214ENST00000622680 NRP1O14786 923 aa12.25□□□□□ -0.45
LINC00963-214ENST00000622680 CPLX1O14810 134 aa12.25□□□□□ -0.45
LINC00963-214ENST00000622680 PI15O43692 258 aa12.25□□□□□ -0.45
LINC00963-214ENST00000622680 NPR3P17342 541 aa12.25□□□□□ -0.45
LINC00963-214ENST00000622680 PSMA5P28066 241 aa12.25□□□□□ -0.45
LINC00963-214ENST00000622680 HOXA11P31270 313 aaPredicted RBP12.25□□□□□ -0.45
LINC00963-214ENST00000622680 QARSP47897 775 aaKnown RBP12.25□□□□□ -0.45
LINC00963-214ENST00000622680 LAMTOR4Q0VGL1 99 aa12.25□□□□□ -0.45
LINC00963-214ENST00000622680 PPP2R5CQ13362 524 aa12.25□□□□□ -0.45
LINC00963-214ENST00000622680 EMC2Q15006 297 aa12.25□□□□□ -0.45
LINC00963-214ENST00000622680 RUFY3Q7L099 469 aa12.25□□□□□ -0.45
LINC00963-214ENST00000622680 TAS1R1Q7RTX1 841 aa12.25□□□□□ -0.45
LINC00963-214ENST00000622680 MRPL10Q7Z7H8 261 aaKnown RBP12.25□□□□□ -0.45
LINC00963-214ENST00000622680 PPFIBP1Q86W92 1011 aa12.25□□□□□ -0.45
LINC00963-214ENST00000622680 SMG8Q8ND04 991 aaKnown RBP12.25□□□□□ -0.45
LINC00963-214ENST00000622680 PSPC1Q8WXF1 523 aaKnown RBP12.25□□□□□ -0.45
LINC00963-214ENST00000622680 SLC7A3Q8WY07 619 aa12.25□□□□□ -0.45
LINC00963-214ENST00000622680 RSPH1Q8WYR4 309 aa12.25□□□□□ -0.45
LINC00963-214ENST00000622680 ACSF2Q96CM8 615 aaPredicted RBP12.25□□□□□ -0.45
LINC00963-214ENST00000622680 CEP170P1Q96L14 293 aa12.25□□□□□ -0.45
LINC00963-214ENST00000622680 B3GALT6Q96L58 329 aa12.25□□□□□ -0.45
LINC00963-214ENST00000622680 FAM193BQ96PV7 902 aaPredicted RBP12.25□□□□□ -0.45
LINC00963-214ENST00000622680 LXNQ9BS40 222 aa12.25□□□□□ -0.45
LINC00963-214ENST00000622680 EMILIN2Q9BXX0 1053 aa12.25□□□□□ -0.45
LINC00963-214ENST00000622680 DHX33Q9H6R0 707 aaKnown RBP12.25□□□□□ -0.45
LINC00963-214ENST00000622680 KCNMB3Q9NPA1 279 aa12.25□□□□□ -0.45
LINC00963-214ENST00000622680 DUSP12Q9UNI6 340 aa12.25□□□□□ -0.45
LINC00963-214ENST00000622680 FAN1Q9Y2M0 1017 aa12.25□□□□□ -0.45
LINC00963-214ENST00000622680 CNTNAP2Q9UHC6 1331 aa12.25□□□□□ -0.45
LINC00963-214ENST00000622680 CARNS1A5YM72 827 aa12.24□□□□□ -0.45
LINC00963-214ENST00000622680 FAM205CA6NFA0 338 aa12.24□□□□□ -0.45
LINC00963-214ENST00000622680 ZBTB39O15060 712 aa12.24□□□□□ -0.45
LINC00963-214ENST00000622680 LILRB3O75022 631 aa12.24□□□□□ -0.45
LINC00963-214ENST00000622680 SOD2P04179 222 aa12.24□□□□□ -0.45
LINC00963-214ENST00000622680 URODP06132 367 aa12.24□□□□□ -0.45
LINC00963-214ENST00000622680 MLH1P40692 756 aa12.24□□□□□ -0.45
LINC00963-214ENST00000622680 CLCN5P51795 746 aa12.24□□□□□ -0.45
LINC00963-214ENST00000622680 AK2P54819 239 aa12.24□□□□□ -0.45
LINC00963-214ENST00000622680 CYP4A11Q02928 519 aa12.24□□□□□ -0.45
LINC00963-214ENST00000622680 TDGQ13569 410 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms