RNA–Protein interactions for RNA: ENST00000622176.4

SLC6A6-209, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best)

Gene SLC6A6, Length 1,116 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-209ENST00000622176 DSC3Q14574 896 aa19.24■□□□□ 0.67
SLC6A6-209ENST00000622176 TAS1R3Q7RTX0 852 aa19.24■□□□□ 0.67
SLC6A6-209ENST00000622176 ZNF720Q7Z2F6 126 aa19.24■□□□□ 0.67
SLC6A6-209ENST00000622176 HAUS6Q7Z4H7 955 aa19.24■□□□□ 0.67
SLC6A6-209ENST00000622176 HOOK1Q9UJC3 728 aaKnown RBP19.24■□□□□ 0.67
SLC6A6-209ENST00000622176 DENND3A2RUS2 1198 aa19.23■□□□□ 0.67
SLC6A6-209ENST00000622176 ERLIN2O94905 339 aa19.23■□□□□ 0.67
SLC6A6-209ENST00000622176 PRKCBP05771 671 aa19.23■□□□□ 0.67
SLC6A6-209ENST00000622176 NMT1P30419 496 aaKnown RBP19.23■□□□□ 0.67
SLC6A6-209ENST00000622176 AXLP30530 894 aa19.23■□□□□ 0.67
SLC6A6-209ENST00000622176 HOXA11P31270 313 aaPredicted RBP19.23■□□□□ 0.67
SLC6A6-209ENST00000622176 ABCD1P33897 745 aa19.23■□□□□ 0.67
SLC6A6-209ENST00000622176 RASIP1Q5U651 963 aa19.23■□□□□ 0.67
SLC6A6-209ENST00000622176 OTOP2Q7RTS6 562 aa19.23■□□□□ 0.67
SLC6A6-209ENST00000622176 RTN4RL1Q86UN2 441 aaPredicted RBP19.23■□□□□ 0.67
SLC6A6-209ENST00000622176 LINC01599Q8WXQ3 324 aa19.23■□□□□ 0.67
SLC6A6-209ENST00000622176 STRA6Q9BX79 667 aa19.23■□□□□ 0.67
SLC6A6-209ENST00000622176 TSPYL2Q9H2G4 693 aaPredicted RBP19.23■□□□□ 0.67
SLC6A6-209ENST00000622176 MRPL44Q9H9J2 332 aaKnown RBP19.23■□□□□ 0.67
SLC6A6-209ENST00000622176 A0A1W2PPC1 479 aa19.22■□□□□ 0.67
SLC6A6-209ENST00000622176 K7ENM7 598 aa19.22■□□□□ 0.67
SLC6A6-209ENST00000622176 ENPP3O14638 875 aa19.22■□□□□ 0.67
SLC6A6-209ENST00000622176 B4GALT5O43286 388 aa19.22■□□□□ 0.67
SLC6A6-209ENST00000622176 MGEA5O60502 916 aa19.22■□□□□ 0.67
SLC6A6-209ENST00000622176 PPP1R37O75864 691 aa19.22■□□□□ 0.67
SLC6A6-209ENST00000622176 RPN1P04843 607 aaKnown RBP19.22■□□□□ 0.67
SLC6A6-209ENST00000622176 GTF2BQ00403 316 aa19.22■□□□□ 0.67
SLC6A6-209ENST00000622176 NCBP1Q09161 790 aaKnown RBP19.22■□□□□ 0.67
SLC6A6-209ENST00000622176 PNOCQ13519 176 aa19.22■□□□□ 0.67
SLC6A6-209ENST00000622176 SHHQ15465 462 aa19.22■□□□□ 0.67
SLC6A6-209ENST00000622176 FAM26FQ5R3K3 315 aa19.22■□□□□ 0.67
SLC6A6-209ENST00000622176 C9orf50Q5SZB4 431 aa19.22■□□□□ 0.67
SLC6A6-209ENST00000622176 GPT2Q8TD30 523 aa19.22■□□□□ 0.67
SLC6A6-209ENST00000622176 RGS18Q9NS28 235 aa19.22■□□□□ 0.67
SLC6A6-209ENST00000622176 TBC1D7Q9P0N9 293 aa19.22■□□□□ 0.67
SLC6A6-209ENST00000622176 PIN4Q9Y237 131 aaKnown RBP19.22■□□□□ 0.67
SLC6A6-209ENST00000622176 CNTNAP2Q9UHC6 1331 aa19.22■□□□□ 0.67
SLC6A6-209ENST00000622176 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.21■□□□□ 0.67
SLC6A6-209ENST00000622176 EDN1P05305 212 aa19.21■□□□□ 0.67
SLC6A6-209ENST00000622176 ZSCAN20P17040 1043 aaPredicted RBP19.21■□□□□ 0.67
SLC6A6-209ENST00000622176 ARF4P18085 180 aaPredicted RBP19.21■□□□□ 0.67
SLC6A6-209ENST00000622176 STRN3Q13033 797 aa19.21■□□□□ 0.67
SLC6A6-209ENST00000622176 PRPF4BQ13523 1007 aaKnown RBP19.21■□□□□ 0.67
SLC6A6-209ENST00000622176 ALCAMQ13740 583 aa19.21■□□□□ 0.67
SLC6A6-209ENST00000622176 KCNB1Q14721 858 aa19.21■□□□□ 0.67
SLC6A6-209ENST00000622176 KMT5BQ4FZB7 885 aa19.21■□□□□ 0.67
SLC6A6-209ENST00000622176 NT5DC1Q5TFE4 455 aa19.21■□□□□ 0.67
SLC6A6-209ENST00000622176 SPATA20Q8TB22 786 aa19.21■□□□□ 0.67
SLC6A6-209ENST00000622176 HPS3Q969F9 1004 aa19.21■□□□□ 0.67
SLC6A6-209ENST00000622176 HVCN1Q96D96 273 aa19.21■□□□□ 0.67
SLC6A6-209ENST00000622176 CCDC51Q96ER9 411 aa19.21■□□□□ 0.67
SLC6A6-209ENST00000622176 ADAM2Q99965 735 aa19.21■□□□□ 0.67
SLC6A6-209ENST00000622176 TRAIPQ9BWF2 469 aa19.21■□□□□ 0.67
SLC6A6-209ENST00000622176 MTIF3Q9H2K0 278 aaKnown RBP19.21■□□□□ 0.67
SLC6A6-209ENST00000622176 TBX20Q9UMR3 447 aa19.21■□□□□ 0.67
SLC6A6-209ENST00000622176 A0A1B0GUA9 196 aa19.2■□□□□ 0.66
SLC6A6-209ENST00000622176 TTLL13PA6NNM8 815 aa19.2■□□□□ 0.66
SLC6A6-209ENST00000622176 CASP5P51878 434 aa19.2■□□□□ 0.66
SLC6A6-209ENST00000622176 WDR5P61964 334 aaKnown RBP19.2■□□□□ 0.66
SLC6A6-209ENST00000622176 PSMD2Q13200 908 aa19.2■□□□□ 0.66
SLC6A6-209ENST00000622176 ZC2HC1CQ53FD0 456 aaPredicted RBP19.2■□□□□ 0.66
SLC6A6-209ENST00000622176 NOTUMQ6P988 496 aa19.2■□□□□ 0.66
SLC6A6-209ENST00000622176 CCDC47Q96A33 483 aaKnown RBP19.2■□□□□ 0.66
SLC6A6-209ENST00000622176 MRPL4Q9BYD3 311 aaKnown RBP19.2■□□□□ 0.66
SLC6A6-209ENST00000622176 FGFBP2Q9BYJ0 223 aa19.2■□□□□ 0.66
SLC6A6-209ENST00000622176 C1orf112Q9NSG2 853 aa19.2■□□□□ 0.66
SLC6A6-209ENST00000622176 EXOC1Q9NV70 894 aa19.2■□□□□ 0.66
SLC6A6-209ENST00000622176 CXXC1Q9P0U4 656 aaPredicted RBP19.2■□□□□ 0.66
SLC6A6-209ENST00000622176 PCDHB13Q9Y5F0 798 aa19.2■□□□□ 0.66
SLC6A6-209ENST00000622176 COL6A3P12111 3177 aa19.2■□□□□ 0.66
SLC6A6-209ENST00000622176 C9IYK1 514 aa19.19■□□□□ 0.66
SLC6A6-209ENST00000622176 RHOBTB3O94955 611 aa19.19■□□□□ 0.66
SLC6A6-209ENST00000622176 SMC2O95347 1197 aa19.19■□□□□ 0.66
SLC6A6-209ENST00000622176 GCNT3O95395 438 aa19.19■□□□□ 0.66
SLC6A6-209ENST00000622176 MBD3O95983 291 aa19.19■□□□□ 0.66
SLC6A6-209ENST00000622176 MYBP10242 640 aa19.19■□□□□ 0.66
SLC6A6-209ENST00000622176 FAM189BP81408 668 aa19.19■□□□□ 0.66
SLC6A6-209ENST00000622176 ZPBP2Q6X784 338 aa19.19■□□□□ 0.66
SLC6A6-209ENST00000622176 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.19■□□□□ 0.66
SLC6A6-209ENST00000622176 SLC24A5Q71RS6 500 aa19.19■□□□□ 0.66
SLC6A6-209ENST00000622176 EPM2AIP1Q7L775 607 aaPredicted RBP19.19■□□□□ 0.66
SLC6A6-209ENST00000622176 MAP4K3Q8IVH8 894 aa19.19■□□□□ 0.66
SLC6A6-209ENST00000622176 CPB2Q96IY4 423 aa19.19■□□□□ 0.66
SLC6A6-209ENST00000622176 RNPC3Q96LT9 517 aaKnown RBP19.19■□□□□ 0.66
SLC6A6-209ENST00000622176 GSDMAQ96QA5 445 aa19.19■□□□□ 0.66
SLC6A6-209ENST00000622176 ACO2Q99798 780 aaKnown RBP19.19■□□□□ 0.66
SLC6A6-209ENST00000622176 CLSTN2Q9H4D0 955 aa19.19■□□□□ 0.66
SLC6A6-209ENST00000622176 USP20Q9Y2K6 914 aa19.19■□□□□ 0.66
SLC6A6-209ENST00000622176 PCDHA5Q9Y5H7 936 aa19.19■□□□□ 0.66
SLC6A6-209ENST00000622176 MICAL3Q7RTP6 2002 aa19.18■□□□□ 0.66
SLC6A6-209ENST00000622176 A0A0U1RQF3 1178 aa19.18■□□□□ 0.66
SLC6A6-209ENST00000622176 ZBBXA8MT70 800 aa19.18■□□□□ 0.66
SLC6A6-209ENST00000622176 PIGRP01833 764 aa19.18■□□□□ 0.66
SLC6A6-209ENST00000622176 AMHP03971 560 aa19.18■□□□□ 0.66
SLC6A6-209ENST00000622176 SARSP49591 514 aaKnown RBP19.18■□□□□ 0.66
SLC6A6-209ENST00000622176 UBXN11Q5T124 520 aa19.18■□□□□ 0.66
SLC6A6-209ENST00000622176 L1TD1Q5T7N2 865 aaKnown RBP19.18■□□□□ 0.66
SLC6A6-209ENST00000622176 ATF7IP2Q5U623 682 aa19.18■□□□□ 0.66
SLC6A6-209ENST00000622176 TWF2Q6IBS0 349 aaKnown RBP19.18■□□□□ 0.66
SLC6A6-209ENST00000622176 STXBP4Q6ZWJ1 553 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms