RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	ARHGEF35	A5YM69	484 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	VWA3A	A6NCI4	1184 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	CASTOR2	A6NHX0	329 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	SPDYE4	A6NLX3	237 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	SFI1	A8K8P3	1242 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171		H3BQV1	296 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	DDHD2	O94830	711 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	ERLIN2	O94905	339 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	SPATA31D3	P0C874	917 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	EPCAM	P16422	314 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	RPL17	P18621	184 aa	Known RBP	4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	OR1G1	P47890	313 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	RBM25	P49756	843 aa	Known RBP	4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	RARRES1	P49788	294 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	MBTD1	Q05BQ5	628 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	PTGDR	Q13258	359 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	SEZ6	Q53EL9	994 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	RARS2	Q5T160	578 aa	Known RBP	4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	PADI6	Q6TGC4	694 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	AGMO	Q6ZNB7	445 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	SPATA31D4	Q6ZUB0	917 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	TAS1R1	Q7RTX1	841 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	TMC7	Q7Z402	723 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	ZBTB33	Q86T24	672 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	ZNF598	Q86UK7	904 aa	Known RBP	4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	SLFN12	Q8IYM2	578 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	LRRC43	Q8N309	656 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	CEP120	Q8N960	986 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	SMG8	Q8ND04	991 aa	Known RBP	4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	FBXO18	Q8NFZ0	1043 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	RDM1	Q8NG50	284 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	NEK9	Q8TD19	979 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	LRRC15	Q8TF66	581 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	TNPO1	Q92973	898 aa	Known RBP	4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	FAM84A	Q96KN4	292 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	RPGRIP1	Q96KN7	1286 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	ZNF558	Q96NG5	402 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	TBC1D32	Q96NH3	1257 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	GAD1	Q99259	594 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	PAAF1	Q9BRP4	392 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	TMEM117	Q9H0C3	514 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	BHMT2	Q9H2M3	363 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	IKZF4	Q9H2S9	585 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	DHX33	Q9H6R0	707 aa	Known RBP	4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	ZSWIM4	Q9H7M6	989 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	NRDE2	Q9H7Z3	1164 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	TLE6	Q9H808	572 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	GOLGA2P5	Q9HBQ8	144 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	TLR9	Q9NR96	1032 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	SH2B1	Q9NRF2	756 aa	Predicted RBP	4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	C1orf112	Q9NSG2	853 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	AGPAT5	Q9NUQ2	364 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	MIOS	Q9NXC5	875 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	CLEC1B	Q9P126	229 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	PARP2	Q9UGN5	583 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	MUTYH	Q9UIF7	546 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	KIAA1024	Q9UPX6	916 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	SMC3	Q9UQE7	1217 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	GDA	Q9Y2T3	454 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	IPP	Q9Y573	584 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	PCDHB12	Q9Y5F1	795 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	VPS13A	Q96RL7	3174 aa		4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	DMD	P11532	3685 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	MYH10	P35580	1976 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	CCDC169	A6NNP5	214 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	C5orf67	F2Z3F1	127 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171		I3L4J1	428 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	MBTPS2	O43462	519 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	ST18	O60284	1047 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	OFD1	O75665	1012 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	PRKCB	P05771	671 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	ARF4	P18085	180 aa	Predicted RBP	4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	LAG3	P18627	525 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	POU3F3	P20264	500 aa	Predicted RBP	4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	MARCKS	P29966	332 aa	Predicted RBP	4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	HOXA11	P31270	313 aa	Predicted RBP	4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	RFC5	P40937	340 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	HMGN5	P82970	282 aa	Known RBP	4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	SPAG1	Q07617	926 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	AMHR2	Q16671	573 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	NOMO2	Q5JPE7	1267 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	GLB1L	Q6UWU2	654 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	ZNF410	Q86VK4	478 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	C4orf19	Q8IY42	314 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	VPS52	Q8N1B4	723 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	SLC39A11	Q8N1S5	342 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	C4orf32	Q8N8J7	132 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	PABPC5	Q96DU9	382 aa	Known RBP	4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	SAMD11	Q96NU1	681 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	HSD17B14	Q9BPX1	270 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	MMTAG2	Q9BU76	263 aa	Known RBP	4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	TRIM6	Q9C030	488 aa	Predicted RBP	4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	RSAD1	Q9HA92	442 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	UPF2	Q9HAU5	1272 aa	Known RBP	4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	C11orf16	Q9NQ32	467 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	SNTG2	Q9NY99	539 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	LRWD1	Q9UFC0	647 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	CD207	Q9UJ71	328 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	NOL7	Q9UMY1	257 aa	Known RBP	4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms