RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 BCL9O00512 1426 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 SPATA31A1Q5TZJ5 1347 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 CYP26A1O43174 497 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 CA4P22748 312 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 MAPK4P31152 587 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 MSH2P43246 934 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 DNAJC3Q13217 504 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 CRYMQ14894 314 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 CLEC4GQ6UXB4 293 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 ARHGEF18Q6ZSZ5 1173 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 ERICH1Q86X53 443 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 RHOT2Q8IXI1 618 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 LRRC57Q8N9N7 239 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 MCUR1Q96AQ8 359 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 ZBTB10Q96DT7 871 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 TMEM237Q96Q45 408 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 AGPAT1Q99943 283 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 EIF2AK1Q9BQI3 630 aaKnown RBP12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 AMNQ9BXJ7 453 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 ALG13Q9NP73 1137 aaKnown RBP12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 KLHL11Q9NVR0 708 aa12.23□□□□□ -0.45
PCDHGA11-203ENST00000622044 EP400Q96L91 3159 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 EXOC1LA0A1B0GW35 172 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 GOLGA8SH3BPF8 625 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 GOLGA8MH3BSY2 632 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 TMEM253P0C7T8 217 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 ICA1Q05084 483 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 ZCWPW2Q504Y3 356 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 C6orf89Q6UWU4 347 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 C4orf33Q8N1A6 199 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 LINC00116Q8NCU8 138 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 OSBPL1AQ9BXW6 950 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 KCTD10Q9H3F6 313 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 CDC42EP4Q9H3Q1 356 aaKnown RBP12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 APEX2Q9UBZ4 518 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 hCG_1984214I3L0E3 225 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 HARSP12081 509 aaKnown RBP12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 RWDD2BP57060 319 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 COPS2P61201 443 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 IL9RQ01113 521 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 EPHA7Q15375 998 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 RBM26Q5T8P6 1007 aaKnown RBP12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 ZNF713Q8N859 430 aaPredicted RBP12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 SUPT20HQ8NEM7 779 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 LRRC8CQ8TDW0 803 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 RAB3IPQ96QF0 476 aaPredicted RBP12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 STK33Q9BYT3 514 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 ARL2BPQ9Y2Y0 163 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 ESYT2A0FGR8 921 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 H0YGN5 161 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 SORBS3O60504 671 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 GH1P01241 217 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 ECHS1P30084 290 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 TSNAXIP1Q2TAA8 658 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 CERKLQ49MI3 558 aaPredicted RBP12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 CBWD6Q4V339 395 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 CBWD3Q5JTY5 395 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 CBWD5Q5RIA9 395 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 UBAP2Q5T6F2 1119 aaKnown RBP12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 AP1ARQ63HQ0 302 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 SCYL3Q8IZE3 742 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 VPS52Q8N1B4 723 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 RIOX1Q9H6W3 641 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 HOMER2Q9NSB8 354 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 ZNF148Q9UQR1 794 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 C15orf41Q9Y2V0 281 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 NFS1Q9Y697 457 aa12.22□□□□□ -0.45
PCDHGA11-203ENST00000622044 DUOX1Q9NRD9 1551 aa12.21□□□□□ -0.45
PCDHGA11-203ENST00000622044 MXI1P50539 228 aa12.21□□□□□ -0.45
PCDHGA11-203ENST00000622044 GPSM2P81274 684 aa12.21□□□□□ -0.45
PCDHGA11-203ENST00000622044 XRCC4Q13426 336 aa12.21□□□□□ -0.45
PCDHGA11-203ENST00000622044 EPM2AIP1Q7L775 607 aaPredicted RBP12.21□□□□□ -0.45
PCDHGA11-203ENST00000622044 LONP2Q86WA8 852 aa12.21□□□□□ -0.45
PCDHGA11-203ENST00000622044 ARMC2Q8NEN0 867 aa12.21□□□□□ -0.45
PCDHGA11-203ENST00000622044 STMN2Q93045 179 aa12.21□□□□□ -0.45
PCDHGA11-203ENST00000622044 RTFDC1Q9BY42 306 aaPredicted RBP12.21□□□□□ -0.45
PCDHGA11-203ENST00000622044 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.21□□□□□ -0.45
PCDHGA11-203ENST00000622044 CPSF2Q9P2I0 782 aaKnown RBP12.21□□□□□ -0.45
PCDHGA11-203ENST00000622044 AGAP1Q9UPQ3 857 aa12.21□□□□□ -0.45
PCDHGA11-203ENST00000622044 TCRBV7S2A1N4TA0A589 114 aa12.21□□□□□ -0.46
PCDHGA11-203ENST00000622044 RIPK2O43353 540 aa12.21□□□□□ -0.46
PCDHGA11-203ENST00000622044 KRT16P08779 473 aa12.21□□□□□ -0.46
PCDHGA11-203ENST00000622044 PYGMP11217 842 aa12.21□□□□□ -0.46
PCDHGA11-203ENST00000622044 RNASELQ05823 741 aaKnown RBP12.21□□□□□ -0.46
PCDHGA11-203ENST00000622044 ORC2Q13416 577 aaPredicted RBP12.21□□□□□ -0.46
PCDHGA11-203ENST00000622044 ARSHQ5FYA8 562 aa12.21□□□□□ -0.46
PCDHGA11-203ENST00000622044 PASD1Q8IV76 773 aa12.21□□□□□ -0.46
PCDHGA11-203ENST00000622044 C3orf20Q8ND61 904 aa12.21□□□□□ -0.46
PCDHGA11-203ENST00000622044 CCHCR1Q8TD31 782 aa12.21□□□□□ -0.46
PCDHGA11-203ENST00000622044 NUDCD1Q96RS6 583 aa12.21□□□□□ -0.46
PCDHGA11-203ENST00000622044 HAO1Q9UJM8 370 aa12.21□□□□□ -0.46
PCDHGA11-203ENST00000622044 ATXN2Q99700 1313 aaKnown RBP12.21□□□□□ -0.46
PCDHGA11-203ENST00000622044 MIF4GDA9UHW6 222 aaKnown RBP12.2□□□□□ -0.46
PCDHGA11-203ENST00000622044 TISP43B9A030 160 aa12.2□□□□□ -0.46
PCDHGA11-203ENST00000622044 KIAA0391O15091 583 aaKnown RBP12.2□□□□□ -0.46
PCDHGA11-203ENST00000622044 DNAJC8O75937 253 aaPredicted RBP12.2□□□□□ -0.46
PCDHGA11-203ENST00000622044 CALCAP01258 141 aa12.2□□□□□ -0.46
PCDHGA11-203ENST00000622044 POLE2P56282 527 aa12.2□□□□□ -0.46
PCDHGA11-203ENST00000622044 CPNE8Q86YQ8 564 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 279.9 ms