RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 OLFML3Q9NRN5 406 aa15.02□□□□□ -0.01
NEK3-210ENST00000620675 MAPK8IP1Q9UQF2 711 aa15.02□□□□□ -0.01
NEK3-210ENST00000620675 K7ERI5 159 aa15.01□□□□□ -0.01
NEK3-210ENST00000620675 ARF4P18085 180 aaPredicted RBP15.01□□□□□ -0.01
NEK3-210ENST00000620675 CDC42EP1Q00587 391 aa15.01□□□□□ -0.01
NEK3-210ENST00000620675 ZNF365Q70YC5 407 aa15.01□□□□□ -0.01
NEK3-210ENST00000620675 OTOP2Q7RTS6 562 aa15.01□□□□□ -0.01
NEK3-210ENST00000620675 ZBTB8OSQ8IWT0 167 aa15.01□□□□□ -0.01
NEK3-210ENST00000620675 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.01□□□□□ -0.013e-10■■■■□ 19.3
NEK3-210ENST00000620675 IL23AQ9NPF7 189 aa15.01□□□□□ -0.01
NEK3-210ENST00000620675 EXOC1Q9NV70 894 aa15.01□□□□□ -0.01
NEK3-210ENST00000620675 MAN1B1Q9UKM7 699 aa15.01□□□□□ -0.01
NEK3-210ENST00000620675 RHOBTB3O94955 611 aa15.01□□□□□ -0.01
NEK3-210ENST00000620675 MBD3O95983 291 aa15.01□□□□□ -0.01
NEK3-210ENST00000620675 MYL1P05976 194 aa15.01□□□□□ -0.01
NEK3-210ENST00000620675 IBSPP21815 317 aaPredicted RBP15.01□□□□□ -0.01
NEK3-210ENST00000620675 SMTNP53814 917 aa15.01□□□□□ -0.01
NEK3-210ENST00000620675 GTF2BQ00403 316 aa15.01□□□□□ -0.01
NEK3-210ENST00000620675 TMEM240Q5SV17 173 aa15.01□□□□□ -0.01
NEK3-210ENST00000620675 C9orf50Q5SZB4 431 aa15.01□□□□□ -0.01
NEK3-210ENST00000620675 EEF1DP3Q658K8 133 aa15.01□□□□□ -0.01
NEK3-210ENST00000620675 CAVIN1Q6NZI2 390 aaKnown RBP15.01□□□□□ -0.01
NEK3-210ENST00000620675 TMCO2Q7Z6W1 182 aaPredicted RBP15.01□□□□□ -0.01
NEK3-210ENST00000620675 ELOA2Q8IYF1 753 aaPredicted RBP15.01□□□□□ -0.01
NEK3-210ENST00000620675 SMARCE1Q969G3 411 aa15.01□□□□□ -0.01
NEK3-210ENST00000620675 ZBTB45Q96K62 511 aaPredicted RBP15.01□□□□□ -0.01
NEK3-210ENST00000620675 TARS2Q9BW92 718 aaKnown RBP15.01□□□□□ -0.01
NEK3-210ENST00000620675 CXXC1Q9P0U4 656 aaPredicted RBP15.01□□□□□ -0.01
NEK3-210ENST00000620675 SEL1LQ9UBV2 794 aa15.01□□□□□ -0.01
NEK3-210ENST00000620675 TBX20Q9UMR3 447 aa15.01□□□□□ -0.01
NEK3-210ENST00000620675 PIN4Q9Y237 131 aaKnown RBP15.01□□□□□ -0.01
NEK3-210ENST00000620675 PHLPP2Q6ZVD8 1323 aa15□□□□□ -0.01
NEK3-210ENST00000620675 MAPK6Q16659 721 aa15□□□□□ -0.01
NEK3-210ENST00000620675 SLC39A4Q6P5W5 647 aa15□□□□□ -0.01
NEK3-210ENST00000620675 EPM2AIP1Q7L775 607 aaPredicted RBP15□□□□□ -0.01
NEK3-210ENST00000620675 SCFD1Q8WVM8 642 aa15□□□□□ -0.01
NEK3-210ENST00000620675 LBHD1Q9BQE6 289 aaPredicted RBP15□□□□□ -0.01
NEK3-210ENST00000620675 C2orf40Q9H1Z8 148 aa15□□□□□ -0.01
NEK3-210ENST00000620675 AGPAT5Q9NUQ2 364 aa15□□□□□ -0.01
NEK3-210ENST00000620675 KIAA1468Q9P260 1216 aa15□□□□□ -0.01
NEK3-210ENST00000620675 SQORQ9Y6N5 450 aa15□□□□□ -0.01
NEK3-210ENST00000620675 ZMYM2Q9UBW7 1377 aa15□□□□□ -0.01
NEK3-210ENST00000620675 ANK1P16157 1881 aa15□□□□□ -0.01
NEK3-210ENST00000620675 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.99□□□□□ -0.01
NEK3-210ENST00000620675 SFPQP23246 707 aaKnown RBP eCLIP14.99□□□□□ -0.01
NEK3-210ENST00000620675 DSC3Q14574 896 aa14.99□□□□□ -0.01
NEK3-210ENST00000620675 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.99□□□□□ -0.01
NEK3-210ENST00000620675 NELFCDQ8IXH7 590 aa14.99□□□□□ -0.01
NEK3-210ENST00000620675 EIF2AQ9BY44 585 aaKnown RBP14.99□□□□□ -0.01
NEK3-210ENST00000620675 HAPLN2Q9GZV7 340 aa14.99□□□□□ -0.01
NEK3-210ENST00000620675 TMEM134Q9H6X4 195 aa14.99□□□□□ -0.01
NEK3-210ENST00000620675 FNDC1Q4ZHG4 1894 aaPredicted RBP14.99□□□□□ -0.01
NEK3-210ENST00000620675 ANKRD63C9JTQ0 380 aa14.99□□□□□ -0.01
NEK3-210ENST00000620675 ACKR2O00590 384 aa14.99□□□□□ -0.01
NEK3-210ENST00000620675 GPR182O15218 404 aa14.99□□□□□ -0.01
NEK3-210ENST00000620675 ERLIN2O94905 339 aa14.99□□□□□ -0.01
NEK3-210ENST00000620675 RFC2P35250 354 aa14.99□□□□□ -0.01
NEK3-210ENST00000620675 EFNA5P52803 228 aa14.99□□□□□ -0.01
NEK3-210ENST00000620675 PPIGQ13427 754 aaKnown RBP eCLIP14.99□□□□□ -0.012e-7■■■□□ 17.9
NEK3-210ENST00000620675 PRPF4BQ13523 1007 aaKnown RBP14.99□□□□□ -0.01
NEK3-210ENST00000620675 KCNB1Q14721 858 aa14.99□□□□□ -0.01
NEK3-210ENST00000620675 FAM187BQ17R55 369 aa14.99□□□□□ -0.01
NEK3-210ENST00000620675 ZNF710Q8N1W2 664 aa14.99□□□□□ -0.01
NEK3-210ENST00000620675 USP38Q8NB14 1042 aa14.99□□□□□ -0.01
NEK3-210ENST00000620675 ADAM2Q99965 735 aa14.99□□□□□ -0.01
NEK3-210ENST00000620675 GDF15Q99988 308 aa14.99□□□□□ -0.01
NEK3-210ENST00000620675 ST6GALNAC4Q9H4F1 302 aa14.99□□□□□ -0.01
NEK3-210ENST00000620675 PRMT7Q9NVM4 692 aaPredicted RBP14.99□□□□□ -0.01
NEK3-210ENST00000620675 CNTNAP2Q9UHC6 1331 aa14.98□□□□□ -0.01
NEK3-210ENST00000620675 CD44P16070 742 aaKnown RBP14.98□□□□□ -0.01
NEK3-210ENST00000620675 KLHL40Q2TBA0 621 aa14.98□□□□□ -0.01
NEK3-210ENST00000620675 UBXN11Q5T124 520 aa14.98□□□□□ -0.01
NEK3-210ENST00000620675 CNKSR3Q6P9H4 555 aa14.98□□□□□ -0.01
NEK3-210ENST00000620675 PPP4R3CPQ6ZMV5 832 aa14.98□□□□□ -0.01
NEK3-210ENST00000620675 ZSWIM2Q8NEG5 633 aa14.98□□□□□ -0.01
NEK3-210ENST00000620675 SEPT8Q92599 483 aa14.98□□□□□ -0.01
NEK3-210ENST00000620675 GSDMAQ96QA5 445 aa14.98□□□□□ -0.01
NEK3-210ENST00000620675 ACO2Q99798 780 aaKnown RBP14.98□□□□□ -0.01
NEK3-210ENST00000620675 PDZD7Q9H5P4 517 aa14.98□□□□□ -0.01
NEK3-210ENST00000620675 MEIS3P2A8K0S8 358 aa14.97□□□□□ -0.01
NEK3-210ENST00000620675 ABLIM1O14639 778 aa14.97□□□□□ -0.01
NEK3-210ENST00000620675 SMC2O95347 1197 aa14.97□□□□□ -0.01
NEK3-210ENST00000620675 PARNO95453 639 aaKnown RBP14.97□□□□□ -0.01
NEK3-210ENST00000620675 DEFB103AP81534 67 aa14.97□□□□□ -0.01
NEK3-210ENST00000620675 MAP4K3Q8IVH8 894 aa14.97□□□□□ -0.01
NEK3-210ENST00000620675 CCDC34Q96HJ3 373 aa14.97□□□□□ -0.01
NEK3-210ENST00000620675 ENPP3O14638 875 aa14.97□□□□□ -0.01
NEK3-210ENST00000620675 MORC3Q14149 939 aa14.97□□□□□ -0.01
NEK3-210ENST00000620675 SHHQ15465 462 aa14.97□□□□□ -0.01
NEK3-210ENST00000620675 L1TD1Q5T7N2 865 aaKnown RBP14.97□□□□□ -0.01
NEK3-210ENST00000620675 ATF7IP2Q5U623 682 aa14.97□□□□□ -0.01
NEK3-210ENST00000620675 ZBTB33Q86T24 672 aa14.97□□□□□ -0.01
NEK3-210ENST00000620675 RPUSD2Q8IZ73 545 aaKnown RBP14.97□□□□□ -0.01
NEK3-210ENST00000620675 CEP120Q8N960 986 aa14.97□□□□□ -0.01
NEK3-210ENST00000620675 ZNF507Q8TCN5 953 aa14.97□□□□□ -0.01
NEK3-210ENST00000620675 HOOK1Q9UJC3 728 aaKnown RBP14.97□□□□□ -0.01
NEK3-210ENST00000620675 HES2Q9Y543 173 aa14.97□□□□□ -0.01
NEK3-210ENST00000620675 A0A1B0GUA9 196 aa14.96□□□□□ -0.01
NEK3-210ENST00000620675 FGBP02675 491 aa14.96□□□□□ -0.01
NEK3-210ENST00000620675 ADSSP30520 456 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms