RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, human

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KHSRP-213	ENST00000619396	FOXN3	O00409	490 aa	Predicted RBP	32.49	■■■□□ 2.79
KHSRP-213	ENST00000619396	WDR46	O15213	610 aa	Known RBP	32.49	■■■□□ 2.79
KHSRP-213	ENST00000619396	PTEN	P60484	403 aa		32.49	■■■□□ 2.79
KHSRP-213	ENST00000619396	RUFY4	Q6ZNE9	571 aa		32.49	■■■□□ 2.79
KHSRP-213	ENST00000619396	MAEA	Q7L5Y9	396 aa		32.49	■■■□□ 2.79
KHSRP-213	ENST00000619396	NLRP14	Q86W24	1093 aa		32.49	■■■□□ 2.79
KHSRP-213	ENST00000619396	UBLCP1	Q8WVY7	318 aa	Predicted RBP	32.49	■■■□□ 2.79
KHSRP-213	ENST00000619396	DEFB129	Q9H1M3	183 aa		32.49	■■■□□ 2.79
KHSRP-213	ENST00000619396	FZD1	Q9UP38	647 aa		32.49	■■■□□ 2.79
KHSRP-213	ENST00000619396	COG5	Q9UP83	839 aa		32.49	■■■□□ 2.79
KHSRP-213	ENST00000619396	UTP11	Q9Y3A2	253 aa	Known RBP	32.49	■■■□□ 2.79
KHSRP-213	ENST00000619396	RPTOR	Q8N122	1335 aa		32.49	■■■□□ 2.79
KHSRP-213	ENST00000619396	ERLIN2	O94905	339 aa		32.49	■■■□□ 2.79
KHSRP-213	ENST00000619396	HPD	P32754	393 aa	Predicted RBP	32.49	■■■□□ 2.79
KHSRP-213	ENST00000619396	MYBPC2	Q14324	1141 aa		32.49	■■■□□ 2.79
KHSRP-213	ENST00000619396	MYCBPAP	Q8TBZ2	947 aa		32.49	■■■□□ 2.79
KHSRP-213	ENST00000619396	ATP8B4	Q8TF62	1192 aa		32.49	■■■□□ 2.79
KHSRP-213	ENST00000619396	CENPH	Q9H3R5	247 aa		32.49	■■■□□ 2.79
KHSRP-213	ENST00000619396	SLC12A6	Q9UHW9	1150 aa		32.49	■■■□□ 2.79
KHSRP-213	ENST00000619396	TGFB2	P61812	414 aa		32.48	■■■□□ 2.79
KHSRP-213	ENST00000619396	MRPS9	P82933	396 aa	Known RBP	32.48	■■■□□ 2.79
KHSRP-213	ENST00000619396	MTMR2	Q13614	643 aa		32.48	■■■□□ 2.79
KHSRP-213	ENST00000619396	ARHGAP44	Q17R89	818 aa		32.48	■■■□□ 2.79
KHSRP-213	ENST00000619396	AGBL2	Q5U5Z8	902 aa		32.48	■■■□□ 2.79
KHSRP-213	ENST00000619396	EXOC3	O60645	756 aa		32.47	■■■□□ 2.79
KHSRP-213	ENST00000619396	HIP1R	O75146	1068 aa		32.47	■■■□□ 2.79
KHSRP-213	ENST00000619396	ZNF280A	P59817	542 aa	Predicted RBP	32.47	■■■□□ 2.79
KHSRP-213	ENST00000619396	SH2D3A	Q9BRG2	576 aa		32.47	■■■□□ 2.79
KHSRP-213	ENST00000619396	TXLNGY	Q9BZA5	131 aa		32.47	■■■□□ 2.79
KHSRP-213	ENST00000619396	DPH5	Q9H2P9	285 aa		32.47	■■■□□ 2.79
KHSRP-213	ENST00000619396	TNIP1	Q15025	636 aa		32.47	■■■□□ 2.79
KHSRP-213	ENST00000619396	MICALL2	Q8IY33	904 aa		32.47	■■■□□ 2.79
KHSRP-213	ENST00000619396	WNK4	Q96J92	1243 aa		32.47	■■■□□ 2.79
KHSRP-213	ENST00000619396	AGPAT1	Q99943	283 aa		32.47	■■■□□ 2.79
KHSRP-213	ENST00000619396	TRIM51	Q9BSJ1	452 aa		32.47	■■■□□ 2.79
KHSRP-213	ENST00000619396	KIAA1683	Q9H0B3	1180 aa		32.47	■■■□□ 2.79
KHSRP-213	ENST00000619396	VGLL3	A8MV65	326 aa		32.46	■■■□□ 2.79
KHSRP-213	ENST00000619396	DHX15	O43143	795 aa	Known RBP	32.46	■■■□□ 2.79
KHSRP-213	ENST00000619396	RFX1	P22670	979 aa		32.46	■■■□□ 2.79
KHSRP-213	ENST00000619396	NBPF12	Q5TAG4	269 aa	Predicted RBP	32.46	■■■□□ 2.79
KHSRP-213	ENST00000619396	TAAR1	Q96RJ0	339 aa		32.46	■■■□□ 2.79
KHSRP-213	ENST00000619396	SLC38A10	Q9HBR0	1119 aa		32.46	■■■□□ 2.79
KHSRP-213	ENST00000619396	HACL1	Q9UJ83	578 aa		32.46	■■■□□ 2.79
KHSRP-213	ENST00000619396	GJA3	Q9Y6H8	435 aa		32.46	■■■□□ 2.79
KHSRP-213	ENST00000619396	FAM107A	O95990	144 aa		32.46	■■■□□ 2.79
KHSRP-213	ENST00000619396	VCAM1	P19320	739 aa		32.46	■■■□□ 2.79
KHSRP-213	ENST00000619396	EIF2AK2	P19525	551 aa	Known RBP	32.46	■■■□□ 2.79
KHSRP-213	ENST00000619396	GMPS	P49915	693 aa	Predicted RBP	32.46	■■■□□ 2.79
KHSRP-213	ENST00000619396	HADHB	P55084	474 aa	Known RBP	32.46	■■■□□ 2.79
KHSRP-213	ENST00000619396	DHX9	Q08211	1270 aa	Known RBP	32.46	■■■□□ 2.79
KHSRP-213	ENST00000619396	PRAMEF18	Q5VWM3	479 aa		32.46	■■■□□ 2.79
KHSRP-213	ENST00000619396	MIER3	Q7Z3K6	550 aa		32.46	■■■□□ 2.79
KHSRP-213	ENST00000619396	RDH13	Q8NBN7	331 aa		32.46	■■■□□ 2.79
KHSRP-213	ENST00000619396	SYTL5	Q8TDW5	730 aa	Predicted RBP	32.46	■■■□□ 2.79
KHSRP-213	ENST00000619396	RIT2	Q99578	217 aa		32.46	■■■□□ 2.79
KHSRP-213	ENST00000619396	MEFV	O15553	781 aa	Predicted RBP	32.45	■■■□□ 2.79
KHSRP-213	ENST00000619396	TKFC	Q3LXA3	575 aa		32.45	■■■□□ 2.79
KHSRP-213	ENST00000619396	SYCP3	Q8IZU3	236 aa		32.45	■■■□□ 2.79
KHSRP-213	ENST00000619396	KAT2B	Q92831	832 aa		32.45	■■■□□ 2.79
KHSRP-213	ENST00000619396	ARHGEF35	A5YM69	484 aa		32.45	■■■□□ 2.78
KHSRP-213	ENST00000619396	PPFIA2	O75334	1257 aa		32.45	■■■□□ 2.78
KHSRP-213	ENST00000619396	PPP2R5E	Q16537	467 aa		32.45	■■■□□ 2.78
KHSRP-213	ENST00000619396	DUPD1	Q68J44	220 aa		32.45	■■■□□ 2.78
KHSRP-213	ENST00000619396	TRMT1L	Q7Z2T5	733 aa	Known RBP	32.45	■■■□□ 2.78
KHSRP-213	ENST00000619396	LPAR1	Q92633	364 aa		32.45	■■■□□ 2.78
KHSRP-213	ENST00000619396	ALG3	Q92685	438 aa		32.45	■■■□□ 2.78
KHSRP-213	ENST00000619396	ERVK-5	Q9HDB9	667 aa		32.45	■■■□□ 2.78
KHSRP-213	ENST00000619396	DLG4	P78352	724 aa		32.44	■■■□□ 2.78
KHSRP-213	ENST00000619396	SLC20A1	Q8WUM9	679 aa		32.44	■■■□□ 2.78
KHSRP-213	ENST00000619396	NAP1L3	Q99457	506 aa	Predicted RBP	32.44	■■■□□ 2.78
KHSRP-213	ENST00000619396	RAB17	Q9H0T7	212 aa		32.44	■■■□□ 2.78
KHSRP-213	ENST00000619396	LRRN2	O75325	713 aa		32.43	■■■□□ 2.78
KHSRP-213	ENST00000619396	SPP2	Q13103	211 aa		32.43	■■■□□ 2.78
KHSRP-213	ENST00000619396	PRPF4B	Q13523	1007 aa	Known RBP	32.43	■■■□□ 2.78
KHSRP-213	ENST00000619396	TCEAL1	Q15170	157 aa		32.43	■■■□□ 2.78
KHSRP-213	ENST00000619396	RPAP3	Q9H6T3	665 aa	Predicted RBP	32.43	■■■□□ 2.78
KHSRP-213	ENST00000619396	SEPT11	Q9NVA2	429 aa	Known RBP	32.43	■■■□□ 2.78
KHSRP-213	ENST00000619396	GGA2	Q9UJY4	613 aa		32.43	■■■□□ 2.78
KHSRP-213	ENST00000619396	TMEM150B	A6NC51	233 aa		32.43	■■■□□ 2.78
KHSRP-213	ENST00000619396	RPS6	P62753	249 aa	Known RBP	32.43	■■■□□ 2.78
KHSRP-213	ENST00000619396	TNFAIP1	Q13829	316 aa		32.43	■■■□□ 2.78
KHSRP-213	ENST00000619396	SPDYC	Q5MJ68	293 aa		32.43	■■■□□ 2.78
KHSRP-213	ENST00000619396	YTHDF3	Q7Z739	585 aa	Known RBP	32.43	■■■□□ 2.78
KHSRP-213	ENST00000619396	TMEM174	Q8WUU8	243 aa		32.43	■■■□□ 2.78
KHSRP-213	ENST00000619396	AGO4	Q9HCK5	861 aa	Known RBP	32.43	■■■□□ 2.78
KHSRP-213	ENST00000619396	ZDHHC18	Q9NUE0	388 aa		32.43	■■■□□ 2.78
KHSRP-213	ENST00000619396	BRCA1	P38398	1863 aa	Known RBP	32.43	■■■□□ 2.78
KHSRP-213	ENST00000619396	DR1	Q01658	176 aa		32.42	■■■□□ 2.78
KHSRP-213	ENST00000619396	ZNF211	Q13398	564 aa	Predicted RBP	32.42	■■■□□ 2.78
KHSRP-213	ENST00000619396	RHOT2	Q8IXI1	618 aa		32.42	■■■□□ 2.78
KHSRP-213	ENST00000619396	ERP44	Q9BS26	406 aa		32.42	■■■□□ 2.78
KHSRP-213	ENST00000619396	CNOT8	Q9UFF9	292 aa	Known RBP	32.42	■■■□□ 2.78
KHSRP-213	ENST00000619396	BCS1L	Q9Y276	419 aa		32.42	■■■□□ 2.78
KHSRP-213	ENST00000619396	UBIAD1	Q9Y5Z9	338 aa		32.42	■■■□□ 2.78
KHSRP-213	ENST00000619396	ALG6	Q9Y672	507 aa		32.42	■■■□□ 2.78
KHSRP-213	ENST00000619396	EMSY	Q7Z589	1322 aa		32.42	■■■□□ 2.78
KHSRP-213	ENST00000619396	FAM170A	A1A519	330 aa		32.42	■■■□□ 2.78
KHSRP-213	ENST00000619396		E7EVH7	732 aa		32.42	■■■□□ 2.78
KHSRP-213	ENST00000619396	CTNND1	O60716	968 aa	Known RBP	32.42	■■■□□ 2.78
KHSRP-213	ENST00000619396	BCR	P11274	1271 aa		32.42	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms