RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 ACKR2O00590 384 aa24.94■■□□□ 1.58
CBWD3-213ENST00000618217 PRKCBP05771 671 aa24.94■■□□□ 1.58
CBWD3-213ENST00000618217 HOXA11P31270 313 aaPredicted RBP24.94■■□□□ 1.58
CBWD3-213ENST00000618217 EPHB4P54760 987 aa24.94■■□□□ 1.58
CBWD3-213ENST00000618217 FPGSQ05932 587 aa24.94■■□□□ 1.58
CBWD3-213ENST00000618217 PAK2Q13177 524 aa24.94■■□□□ 1.58
CBWD3-213ENST00000618217 RBM43Q6ZSC3 357 aaKnown RBP24.94■■□□□ 1.58
CBWD3-213ENST00000618217 PRIMPOLQ96LW4 560 aa24.94■■□□□ 1.58
CBWD3-213ENST00000618217 IL23AQ9NPF7 189 aa24.94■■□□□ 1.58
CBWD3-213ENST00000618217 TBX20Q9UMR3 447 aa24.94■■□□□ 1.58
CBWD3-213ENST00000618217 B4GALT5O43286 388 aa24.94■■□□□ 1.58
CBWD3-213ENST00000618217 TSPAN1O60635 241 aa24.94■■□□□ 1.58
CBWD3-213ENST00000618217 GCNT3O95395 438 aa24.94■■□□□ 1.58
CBWD3-213ENST00000618217 HOXD13P35453 343 aa24.94■■□□□ 1.58
CBWD3-213ENST00000618217 NFX1Q12986 1120 aaKnown RBP24.94■■□□□ 1.58
CBWD3-213ENST00000618217 PPIGQ13427 754 aaKnown RBP eCLIP24.94■■□□□ 1.58
CBWD3-213ENST00000618217 CATSPER4Q7RTX7 472 aa24.94■■□□□ 1.58
CBWD3-213ENST00000618217 RPUSD2Q8IZ73 545 aaKnown RBP24.94■■□□□ 1.58
CBWD3-213ENST00000618217 CCDC47Q96A33 483 aaKnown RBP24.94■■□□□ 1.58
CBWD3-213ENST00000618217 AGPAT5Q9NUQ2 364 aa24.94■■□□□ 1.58
CBWD3-213ENST00000618217 RMND1Q9NWS8 449 aa24.94■■□□□ 1.58
CBWD3-213ENST00000618217 MAN1B1Q9UKM7 699 aa24.94■■□□□ 1.58
CBWD3-213ENST00000618217 USP20Q9Y2K6 914 aa24.94■■□□□ 1.58
CBWD3-213ENST00000618217 PFKMP08237 780 aa24.93■■□□□ 1.58
CBWD3-213ENST00000618217 ABCD1P33897 745 aa24.93■■□□□ 1.58
CBWD3-213ENST00000618217 KCNA1Q09470 495 aa24.93■■□□□ 1.58
CBWD3-213ENST00000618217 ALCAMQ13740 583 aa24.93■■□□□ 1.58
CBWD3-213ENST00000618217 DSC3Q14574 896 aa24.93■■□□□ 1.58
CBWD3-213ENST00000618217 ZNF507Q8TCN5 953 aa24.93■■□□□ 1.58
CBWD3-213ENST00000618217 SCFD1Q8WVM8 642 aa24.93■■□□□ 1.58
CBWD3-213ENST00000618217 SEPT8Q92599 483 aa24.93■■□□□ 1.58
CBWD3-213ENST00000618217 HVCN1Q96D96 273 aa24.93■■□□□ 1.58
CBWD3-213ENST00000618217 PCDHB13Q9Y5F0 798 aa24.93■■□□□ 1.58
CBWD3-213ENST00000618217 CNTNAP2Q9UHC6 1331 aa24.92■■□□□ 1.58
CBWD3-213ENST00000618217 H0YGN5 161 aa24.92■■□□□ 1.58
CBWD3-213ENST00000618217 ARF4P18085 180 aaPredicted RBP24.92■■□□□ 1.58
CBWD3-213ENST00000618217 BMP6P22004 513 aa24.92■■□□□ 1.58
CBWD3-213ENST00000618217 SKOR2Q2VWA4 1001 aaPredicted RBP24.92■■□□□ 1.58
CBWD3-213ENST00000618217 CCDC183Q5T5S1 534 aa24.92■■□□□ 1.58
CBWD3-213ENST00000618217 FAM43BQ6ZT52 329 aaPredicted RBP24.92■■□□□ 1.58
CBWD3-213ENST00000618217 LBHD1Q9BQE6 289 aaPredicted RBP24.92■■□□□ 1.58
CBWD3-213ENST00000618217 GDAQ9Y2T3 454 aa24.92■■□□□ 1.58
CBWD3-213ENST00000618217 EIF3DO15371 548 aaKnown RBP eCLIP24.91■■□□□ 1.58
CBWD3-213ENST00000618217 MGEA5O60502 916 aa24.91■■□□□ 1.58
CBWD3-213ENST00000618217 ERLIN2O94905 339 aa24.91■■□□□ 1.58
CBWD3-213ENST00000618217 ACRP10323 421 aa24.91■■□□□ 1.58
CBWD3-213ENST00000618217 MLLT1Q03111 559 aaPredicted RBP24.91■■□□□ 1.58
CBWD3-213ENST00000618217 MORC3Q14149 939 aa24.91■■□□□ 1.58
CBWD3-213ENST00000618217 L1TD1Q5T7N2 865 aaKnown RBP24.91■■□□□ 1.58
CBWD3-213ENST00000618217 CAVIN1Q6NZI2 390 aaKnown RBP24.91■■□□□ 1.58
CBWD3-213ENST00000618217 CNKSR3Q6P9H4 555 aa24.91■■□□□ 1.58
CBWD3-213ENST00000618217 RTN4RL1Q86UN2 441 aaPredicted RBP24.91■■□□□ 1.58
CBWD3-213ENST00000618217 MAP4K3Q8IVH8 894 aa24.91■■□□□ 1.58
CBWD3-213ENST00000618217 APBB2Q92870 758 aa24.91■■□□□ 1.58
CBWD3-213ENST00000618217 MICAL3Q7RTP6 2002 aa24.91■■□□□ 1.58
CBWD3-213ENST00000618217 PRPF6O94906 941 aaKnown RBP24.9■■□□□ 1.58
CBWD3-213ENST00000618217 AXLP30530 894 aa24.9■■□□□ 1.58
CBWD3-213ENST00000618217 MAGEA10P43363 369 aaPredicted RBP24.9■■□□□ 1.58
CBWD3-213ENST00000618217 STRN3Q13033 797 aa24.9■■□□□ 1.58
CBWD3-213ENST00000618217 PRPF4BQ13523 1007 aaKnown RBP24.9■■□□□ 1.58
CBWD3-213ENST00000618217 BMT2Q1RMZ1 405 aa24.9■■□□□ 1.58
CBWD3-213ENST00000618217 ZNF658Q5TYW1 1059 aaPredicted RBP24.9■■□□□ 1.58
CBWD3-213ENST00000618217 CHST12Q9NRB3 414 aa24.9■■□□□ 1.58
CBWD3-213ENST00000618217 A0A1B0GUA9 196 aa24.9■■□□□ 1.58
CBWD3-213ENST00000618217 PIGRP01833 764 aa24.9■■□□□ 1.58
CBWD3-213ENST00000618217 LINC01599Q8WXQ3 324 aa24.9■■□□□ 1.58
CBWD3-213ENST00000618217 CPB2Q96IY4 423 aa24.9■■□□□ 1.58
CBWD3-213ENST00000618217 ACO2Q99798 780 aaKnown RBP24.9■■□□□ 1.58
CBWD3-213ENST00000618217 TARS2Q9BW92 718 aaKnown RBP24.9■■□□□ 1.58
CBWD3-213ENST00000618217 MRPL4Q9BYD3 311 aaKnown RBP24.9■■□□□ 1.58
CBWD3-213ENST00000618217 IKZF4Q9H2S9 585 aa24.9■■□□□ 1.58
CBWD3-213ENST00000618217 BIN1O00499 593 aa24.89■■□□□ 1.57
CBWD3-213ENST00000618217 ISM2Q6H9L7 571 aa24.89■■□□□ 1.57
CBWD3-213ENST00000618217 ZPBP2Q6X784 338 aa24.89■■□□□ 1.57
CBWD3-213ENST00000618217 STXBP4Q6ZWJ1 553 aa24.89■■□□□ 1.57
CBWD3-213ENST00000618217 SMYD4Q8IYR2 804 aaPredicted RBP24.89■■□□□ 1.57
CBWD3-213ENST00000618217 ACCSQ96QU6 501 aa24.89■■□□□ 1.57
CBWD3-213ENST00000618217 FTHL17Q9BXU8 183 aa24.89■■□□□ 1.57
CBWD3-213ENST00000618217 PTPRHQ9HD43 1115 aa24.89■■□□□ 1.57
CBWD3-213ENST00000618217 PIN4Q9Y237 131 aaKnown RBP24.89■■□□□ 1.57
CBWD3-213ENST00000618217 COBLL1Q53SF7 1204 aa24.88■■□□□ 1.57
CBWD3-213ENST00000618217 TMEM240Q5SV17 173 aa24.88■■□□□ 1.57
CBWD3-213ENST00000618217 SLC39A4Q6P5W5 647 aa24.88■■□□□ 1.57
CBWD3-213ENST00000618217 ZNF365Q70YC5 407 aa24.88■■□□□ 1.57
CBWD3-213ENST00000618217 TRIML1Q8N9V2 468 aa24.88■■□□□ 1.57
CBWD3-213ENST00000618217 GTPBP4Q9BZE4 634 aaKnown RBP24.88■■□□□ 1.57
CBWD3-213ENST00000618217 TSPYL2Q9H2G4 693 aaPredicted RBP24.88■■□□□ 1.57
CBWD3-213ENST00000618217 UBE4BO95155 1302 aa24.88■■□□□ 1.57
CBWD3-213ENST00000618217 ZMYM2Q9UBW7 1377 aa24.88■■□□□ 1.57
CBWD3-213ENST00000618217 ABLIM1O14639 778 aa24.87■■□□□ 1.57
CBWD3-213ENST00000618217 PROZP22891 400 aa24.87■■□□□ 1.57
CBWD3-213ENST00000618217 ADAM2Q99965 735 aa24.87■■□□□ 1.57
CBWD3-213ENST00000618217 GDF15Q99988 308 aa24.87■■□□□ 1.57
CBWD3-213ENST00000618217 TRAIPQ9BWF2 469 aa24.87■■□□□ 1.57
CBWD3-213ENST00000618217 PDZD7Q9H5P4 517 aa24.87■■□□□ 1.57
CBWD3-213ENST00000618217 TNFSF13BQ9Y275 285 aa24.87■■□□□ 1.57
CBWD3-213ENST00000618217 ENPP3O14638 875 aa24.86■■□□□ 1.57
CBWD3-213ENST00000618217 NCBP1Q09161 790 aaKnown RBP24.86■■□□□ 1.57
CBWD3-213ENST00000618217 IKBKEQ14164 716 aa24.86■■□□□ 1.57
CBWD3-213ENST00000618217 UBXN11Q5T124 520 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms