RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 TBX20Q9UMR3 447 aa17.18■□□□□ 0.34
PCDHGC3-204ENST00000617222 DNAH12Q6ZR08 3092 aa17.18■□□□□ 0.34
PCDHGC3-204ENST00000617222 B4GALT5O43286 388 aa17.17■□□□□ 0.34
PCDHGC3-204ENST00000617222 TSPAN1O60635 241 aa17.17■□□□□ 0.34
PCDHGC3-204ENST00000617222 PPP1R37O75864 691 aa17.17■□□□□ 0.34
PCDHGC3-204ENST00000617222 EDN1P05305 212 aa17.17■□□□□ 0.34
PCDHGC3-204ENST00000617222 NCBP1Q09161 790 aaKnown RBP17.17■□□□□ 0.34
PCDHGC3-204ENST00000617222 PRPF4BQ13523 1007 aaKnown RBP17.17■□□□□ 0.34
PCDHGC3-204ENST00000617222 ALCAMQ13740 583 aa17.17■□□□□ 0.34
PCDHGC3-204ENST00000617222 PCBP1Q15365 356 aaKnown RBP eCLIP17.17■□□□□ 0.34
PCDHGC3-204ENST00000617222 AMHR2Q16671 573 aa17.17■□□□□ 0.34
PCDHGC3-204ENST00000617222 FAM187BQ17R55 369 aa17.17■□□□□ 0.34
PCDHGC3-204ENST00000617222 TCTN1Q2MV58 587 aa17.17■□□□□ 0.34
PCDHGC3-204ENST00000617222 PPP4R3CPQ6ZMV5 832 aa17.17■□□□□ 0.34
PCDHGC3-204ENST00000617222 STXBP4Q6ZWJ1 553 aa17.17■□□□□ 0.34
PCDHGC3-204ENST00000617222 KIAA0895Q8NCT3 520 aa17.17■□□□□ 0.34
PCDHGC3-204ENST00000617222 KCNN1Q92952 543 aa17.17■□□□□ 0.34
PCDHGC3-204ENST00000617222 CPB2Q96IY4 423 aa17.17■□□□□ 0.34
PCDHGC3-204ENST00000617222 TMX1Q9H3N1 280 aa17.17■□□□□ 0.34
PCDHGC3-204ENST00000617222 GDAQ9Y2T3 454 aa17.17■□□□□ 0.34
PCDHGC3-204ENST00000617222 PHLPP2Q6ZVD8 1323 aa17.17■□□□□ 0.34
PCDHGC3-204ENST00000617222 TTLL13PA6NNM8 815 aa17.16■□□□□ 0.34
PCDHGC3-204ENST00000617222 H0YGN5 161 aa17.16■□□□□ 0.34
PCDHGC3-204ENST00000617222 SCP2P22307 547 aa17.16■□□□□ 0.34
PCDHGC3-204ENST00000617222 ABCD1P33897 745 aa17.16■□□□□ 0.34
PCDHGC3-204ENST00000617222 MLLT1Q03111 559 aaPredicted RBP17.16■□□□□ 0.34
PCDHGC3-204ENST00000617222 KCNA1Q09470 495 aa17.16■□□□□ 0.34
PCDHGC3-204ENST00000617222 TMEM132AQ24JP5 1023 aa17.16■□□□□ 0.34
PCDHGC3-204ENST00000617222 L1TD1Q5T7N2 865 aaKnown RBP17.16■□□□□ 0.34
PCDHGC3-204ENST00000617222 C16orf59Q7L2K0 433 aa17.16■□□□□ 0.34
PCDHGC3-204ENST00000617222 EPM2AIP1Q7L775 607 aaPredicted RBP17.16■□□□□ 0.34
PCDHGC3-204ENST00000617222 SCFD1Q8WVM8 642 aa17.16■□□□□ 0.34
PCDHGC3-204ENST00000617222 SYAP1Q96A49 352 aaPredicted RBP17.16■□□□□ 0.34
PCDHGC3-204ENST00000617222 PRIMPOLQ96LW4 560 aa17.16■□□□□ 0.34
PCDHGC3-204ENST00000617222 ACCSQ96QU6 501 aa17.16■□□□□ 0.34
PCDHGC3-204ENST00000617222 TARS2Q9BW92 718 aaKnown RBP17.16■□□□□ 0.34
PCDHGC3-204ENST00000617222 MKI67P46013 3256 aaKnown RBP17.16■□□□□ 0.34
PCDHGC3-204ENST00000617222 PFKMP08237 780 aa17.15■□□□□ 0.34
PCDHGC3-204ENST00000617222 ZSCAN20P17040 1043 aaPredicted RBP17.15■□□□□ 0.34
PCDHGC3-204ENST00000617222 ARF4P18085 180 aaPredicted RBP17.15■□□□□ 0.34
PCDHGC3-204ENST00000617222 HOXA11P31270 313 aaPredicted RBP17.15■□□□□ 0.34
PCDHGC3-204ENST00000617222 MAGEA10P43363 369 aaPredicted RBP17.15■□□□□ 0.34
PCDHGC3-204ENST00000617222 EPHB4P54760 987 aa17.15■□□□□ 0.34
PCDHGC3-204ENST00000617222 MORC3Q14149 939 aa17.15■□□□□ 0.34
PCDHGC3-204ENST00000617222 ZNF658Q5TYW1 1059 aaPredicted RBP17.15■□□□□ 0.34
PCDHGC3-204ENST00000617222 CNKSR3Q6P9H4 555 aa17.15■□□□□ 0.34
PCDHGC3-204ENST00000617222 MAP4K3Q8IVH8 894 aa17.15■□□□□ 0.34
PCDHGC3-204ENST00000617222 SMYD4Q8IYR2 804 aaPredicted RBP17.15■□□□□ 0.34
PCDHGC3-204ENST00000617222 ZNF507Q8TCN5 953 aa17.15■□□□□ 0.34
PCDHGC3-204ENST00000617222 APBB2Q92870 758 aa17.15■□□□□ 0.34
PCDHGC3-204ENST00000617222 HVCN1Q96D96 273 aa17.15■□□□□ 0.34
PCDHGC3-204ENST00000617222 BICD1Q96G01 975 aa17.15■□□□□ 0.34
PCDHGC3-204ENST00000617222 MRPL4Q9BYD3 311 aaKnown RBP17.15■□□□□ 0.34
PCDHGC3-204ENST00000617222 CHST12Q9NRB3 414 aa17.15■□□□□ 0.34
PCDHGC3-204ENST00000617222 AGPAT5Q9NUQ2 364 aa17.15■□□□□ 0.34
PCDHGC3-204ENST00000617222 MAPK8IP1Q9UQF2 711 aa17.15■□□□□ 0.34
PCDHGC3-204ENST00000617222 PIN4Q9Y237 131 aaKnown RBP17.15■□□□□ 0.34
PCDHGC3-204ENST00000617222 EIF3DO15371 548 aaKnown RBP eCLIP17.14■□□□□ 0.33
PCDHGC3-204ENST00000617222 MGEA5O60502 916 aa17.14■□□□□ 0.33
PCDHGC3-204ENST00000617222 FGBP02675 491 aa17.14■□□□□ 0.33
PCDHGC3-204ENST00000617222 AXLP30530 894 aa17.14■□□□□ 0.33
PCDHGC3-204ENST00000617222 DSC3Q14574 896 aa17.14■□□□□ 0.33
PCDHGC3-204ENST00000617222 ATF7IP2Q5U623 682 aa17.14■□□□□ 0.33
PCDHGC3-204ENST00000617222 RBM43Q6ZSC3 357 aaKnown RBP17.14■□□□□ 0.33
PCDHGC3-204ENST00000617222 ZNF365Q70YC5 407 aa17.14■□□□□ 0.33
PCDHGC3-204ENST00000617222 RTN4RL1Q86UN2 441 aaPredicted RBP17.14■□□□□ 0.33
PCDHGC3-204ENST00000617222 CDR2LQ86X02 465 aaPredicted RBP17.14■□□□□ 0.33
PCDHGC3-204ENST00000617222 NELFCDQ8IXH7 590 aa17.14■□□□□ 0.33
PCDHGC3-204ENST00000617222 MYOCDQ8IZQ8 938 aa17.14■□□□□ 0.33
PCDHGC3-204ENST00000617222 SYCP3Q8IZU3 236 aa17.14■□□□□ 0.33
PCDHGC3-204ENST00000617222 ACO2Q99798 780 aaKnown RBP17.14■□□□□ 0.33
PCDHGC3-204ENST00000617222 ADAM2Q99965 735 aa17.14■□□□□ 0.33
PCDHGC3-204ENST00000617222 FTHL17Q9BXU8 183 aa17.14■□□□□ 0.33
PCDHGC3-204ENST00000617222 IKZF4Q9H2S9 585 aa17.14■□□□□ 0.33
PCDHGC3-204ENST00000617222 EXOC7Q9UPT5 735 aa17.14■□□□□ 0.33
PCDHGC3-204ENST00000617222 A0A1B0GUA9 196 aa17.13■□□□□ 0.33
PCDHGC3-204ENST00000617222 ENPP3O14638 875 aa17.13■□□□□ 0.33
PCDHGC3-204ENST00000617222 BMP6P22004 513 aa17.13■□□□□ 0.33
PCDHGC3-204ENST00000617222 HOXD13P35453 343 aa17.13■□□□□ 0.33
PCDHGC3-204ENST00000617222 LIG4P49917 911 aa17.13■□□□□ 0.33
PCDHGC3-204ENST00000617222 IKBKEQ14164 716 aa17.13■□□□□ 0.33
PCDHGC3-204ENST00000617222 BMT2Q1RMZ1 405 aa17.13■□□□□ 0.33
PCDHGC3-204ENST00000617222 TMEM240Q5SV17 173 aa17.13■□□□□ 0.33
PCDHGC3-204ENST00000617222 EEF1DP3Q658K8 133 aa17.13■□□□□ 0.33
PCDHGC3-204ENST00000617222 TWF2Q6IBS0 349 aaKnown RBP17.13■□□□□ 0.33
PCDHGC3-204ENST00000617222 NOTUMQ6P988 496 aa17.13■□□□□ 0.33
PCDHGC3-204ENST00000617222 TRIML1Q8N9V2 468 aa17.13■□□□□ 0.33
PCDHGC3-204ENST00000617222 ZBTB45Q96K62 511 aaPredicted RBP17.13■□□□□ 0.33
PCDHGC3-204ENST00000617222 GTPBP4Q9BZE4 634 aaKnown RBP17.13■□□□□ 0.33
PCDHGC3-204ENST00000617222 TMEM206Q9H813 350 aa17.13■□□□□ 0.33
PCDHGC3-204ENST00000617222 CNTNAP2Q9UHC6 1331 aa17.13■□□□□ 0.33
PCDHGC3-204ENST00000617222 MYH11P35749 1972 aa17.12■□□□□ 0.33
PCDHGC3-204ENST00000617222 ANKRD63C9JTQ0 380 aa17.12■□□□□ 0.33
PCDHGC3-204ENST00000617222 HNRNPDLO14979 420 aaKnown RBP17.12■□□□□ 0.33
PCDHGC3-204ENST00000617222 N4BP3O15049 544 aa17.12■□□□□ 0.33
PCDHGC3-204ENST00000617222 PIGRP01833 764 aa17.12■□□□□ 0.33
PCDHGC3-204ENST00000617222 ACTN1P12814 892 aa17.12■□□□□ 0.33
PCDHGC3-204ENST00000617222 PRCPP42785 496 aa17.12■□□□□ 0.33
PCDHGC3-204ENST00000617222 KNOP1Q1ED39 458 aaKnown RBP17.12■□□□□ 0.33
PCDHGC3-204ENST00000617222 ZPBP2Q6X784 338 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms