RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 FBXL16Q8N461 479 aa19.75■□□□□ 0.75
TRAPPC3-209ENST00000616395 SLC2A4RGQ9NR83 387 aa19.75■□□□□ 0.75
TRAPPC3-209ENST00000616395 MRPL17Q9NRX2 175 aaKnown RBP19.75■□□□□ 0.75
TRAPPC3-209ENST00000616395 PRR5-ARHGAP8B1AHC4 643 aa19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 FAM86B1E9PN63 330 aa19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 GOLGA6L22H0YM25 854 aa19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 IPO5O00410 1097 aaKnown RBP19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 C2CD2LO14523 706 aa19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 FOSP01100 380 aaPredicted RBP19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 FAM86B2P0C5J1 330 aa19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 CALM1P0DP23 149 aa19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 CALM2P0DP24 149 aa19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 CALM3P0DP25 149 aa19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 PDCP20941 246 aa19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 SREBF1P36956 1147 aa19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 STARD6P59095 220 aa19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 ARHGAP8P85298 464 aa19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 TYW1BQ6NUM6 668 aa19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 CYP26C1Q6V0L0 522 aa19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 PLA2G4DQ86XP0 818 aa19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 FANCBQ8NB91 859 aa19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 NLRP7Q8WX94 980 aa19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 BRF1Q92994 677 aa19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 RHOBTB2Q9BYZ6 727 aa19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 RIC8AQ9NPQ8 531 aa19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 SPATA6Q9NWH7 488 aaPredicted RBP19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 GABBR1Q9UBS5 961 aa19.74■□□□□ 0.75
TRAPPC3-209ENST00000616395 SPTBN2O15020 2390 aa19.73■□□□□ 0.75
TRAPPC3-209ENST00000616395 CNTNAP5Q8WYK1 1306 aa19.73■□□□□ 0.75
TRAPPC3-209ENST00000616395 GOLGA8AA7E2F4 631 aa19.73■□□□□ 0.75
TRAPPC3-209ENST00000616395 GOLGA8BA8MQT2 603 aa19.73■□□□□ 0.75
TRAPPC3-209ENST00000616395 ZBTB43O43298 467 aa19.73■□□□□ 0.75
TRAPPC3-209ENST00000616395 OFD1O75665 1012 aa19.73■□□□□ 0.75
TRAPPC3-209ENST00000616395 RFPL2O75678 378 aa19.73■□□□□ 0.75
TRAPPC3-209ENST00000616395 ADRB1P08588 477 aa19.73■□□□□ 0.75
TRAPPC3-209ENST00000616395 LAMP2P13473 410 aa19.73■□□□□ 0.75
TRAPPC3-209ENST00000616395 HTR4Q13639 388 aa19.73■□□□□ 0.75
TRAPPC3-209ENST00000616395 RTN1Q16799 776 aa19.73■□□□□ 0.75
TRAPPC3-209ENST00000616395 WWC2Q6AWC2 1192 aa19.73■□□□□ 0.75
TRAPPC3-209ENST00000616395 SYNE3Q6ZMZ3 975 aa19.73■□□□□ 0.75
TRAPPC3-209ENST00000616395 SMG7Q92540 1137 aaKnown RBP19.73■□□□□ 0.75
TRAPPC3-209ENST00000616395 RTKNQ9BST9 563 aa19.73■□□□□ 0.75
TRAPPC3-209ENST00000616395 TRAIPQ9BWF2 469 aa19.73■□□□□ 0.75
TRAPPC3-209ENST00000616395 CHST12Q9NRB3 414 aa19.73■□□□□ 0.75
TRAPPC3-209ENST00000616395 STK39Q9UEW8 545 aa19.73■□□□□ 0.75
TRAPPC3-209ENST00000616395 FBXO4Q9UKT5 387 aa19.73■□□□□ 0.75
TRAPPC3-209ENST00000616395 NUMBLQ9Y6R0 609 aa19.73■□□□□ 0.75
TRAPPC3-209ENST00000616395 ANHXE9PGG2 379 aa19.72■□□□□ 0.75
TRAPPC3-209ENST00000616395 LAMTOR5O43504 91 aa19.72■□□□□ 0.75
TRAPPC3-209ENST00000616395 PSAPP07602 524 aa19.72■□□□□ 0.75
TRAPPC3-209ENST00000616395 NAPAP54920 295 aa19.72■□□□□ 0.75
TRAPPC3-209ENST00000616395 CSTF1Q05048 431 aaKnown RBP19.72■□□□□ 0.75
TRAPPC3-209ENST00000616395 TWF2Q6IBS0 349 aaKnown RBP19.72■□□□□ 0.75
TRAPPC3-209ENST00000616395 ZNF746Q6NUN9 644 aaPredicted RBP19.72■□□□□ 0.75
TRAPPC3-209ENST00000616395 ATRIPQ8WXE1 791 aa19.72■□□□□ 0.75
TRAPPC3-209ENST00000616395 SECISBP2LQ93073 1101 aaKnown RBP19.72■□□□□ 0.75
TRAPPC3-209ENST00000616395 ZNF707Q96C28 371 aaPredicted RBP19.72■□□□□ 0.75
TRAPPC3-209ENST00000616395 ZNF274Q96GC6 653 aaPredicted RBP19.72■□□□□ 0.75
TRAPPC3-209ENST00000616395 BORCS6Q96GS4 357 aa19.72■□□□□ 0.75
TRAPPC3-209ENST00000616395 SMG5Q9UPR3 1016 aaKnown RBP19.72■□□□□ 0.75
TRAPPC3-209ENST00000616395 PCDHGA2Q9Y5H1 932 aa19.72■□□□□ 0.75
TRAPPC3-209ENST00000616395 CACNA1GO43497 2377 aa19.71■□□□□ 0.75
TRAPPC3-209ENST00000616395 CHD6Q8TD26 2715 aa19.71■□□□□ 0.75
TRAPPC3-209ENST00000616395 MAP1BP46821 2468 aaKnown RBP19.71■□□□□ 0.75
TRAPPC3-209ENST00000616395 IGLV3-22A0A075B6J6 115 aa19.71■□□□□ 0.75
TRAPPC3-209ENST00000616395 TEX28O15482 410 aa19.71■□□□□ 0.75
TRAPPC3-209ENST00000616395 DDHD2O94830 711 aa19.71■□□□□ 0.75
TRAPPC3-209ENST00000616395 CDC27P30260 824 aa19.71■□□□□ 0.75
TRAPPC3-209ENST00000616395 DDIT3P35638 169 aa19.71■□□□□ 0.75
TRAPPC3-209ENST00000616395 ADCY7P51828 1080 aa19.71■□□□□ 0.75
TRAPPC3-209ENST00000616395 CPLX2Q6PUV4 134 aaKnown RBP19.71■□□□□ 0.75
TRAPPC3-209ENST00000616395 GET4Q7L5D6 327 aaPredicted RBP19.71■□□□□ 0.75
TRAPPC3-209ENST00000616395 CCDC83Q8IWF9 413 aa19.71■□□□□ 0.75
TRAPPC3-209ENST00000616395 SHDQ96IW2 340 aa19.71■□□□□ 0.75
TRAPPC3-209ENST00000616395 CHAMP1Q96JM3 812 aa19.71■□□□□ 0.75
TRAPPC3-209ENST00000616395 FAM167AQ96KS9 214 aa19.71■□□□□ 0.75
TRAPPC3-209ENST00000616395 RPS6KC1Q96S38 1066 aa19.71■□□□□ 0.75
TRAPPC3-209ENST00000616395 ZNF577Q9BSK1 485 aa19.71■□□□□ 0.75
TRAPPC3-209ENST00000616395 BCO2Q9BYV7 579 aa19.71■□□□□ 0.75
TRAPPC3-209ENST00000616395 FAM105AQ9NUU6 356 aa19.71■□□□□ 0.75
TRAPPC3-209ENST00000616395 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.71■□□□□ 0.751e-17■■■■■ 62.9
TRAPPC3-209ENST00000616395 USP18Q9UMW8 372 aa19.71■□□□□ 0.75
TRAPPC3-209ENST00000616395 PCDHA10Q9Y5I2 948 aa19.71■□□□□ 0.75
TRAPPC3-209ENST00000616395 CACNA1IQ9P0X4 2223 aa19.7■□□□□ 0.74
TRAPPC3-209ENST00000616395 URODP06132 367 aa19.7■□□□□ 0.74
TRAPPC3-209ENST00000616395 ADH1AP07327 375 aa19.7■□□□□ 0.74
TRAPPC3-209ENST00000616395 SPATA31D3P0C874 917 aa19.7■□□□□ 0.74
TRAPPC3-209ENST00000616395 SKIP12755 728 aa19.7■□□□□ 0.74
TRAPPC3-209ENST00000616395 TGM1P22735 817 aa19.7■□□□□ 0.74
TRAPPC3-209ENST00000616395 GPC5P78333 572 aa19.7■□□□□ 0.74
TRAPPC3-209ENST00000616395 DRP2Q13474 957 aa19.7■□□□□ 0.74
TRAPPC3-209ENST00000616395 TOB2Q14106 344 aaPredicted RBP19.7■□□□□ 0.74
TRAPPC3-209ENST00000616395 ELMSAN1Q6PJG2 1045 aa19.7■□□□□ 0.74
TRAPPC3-209ENST00000616395 SPATA31D4Q6ZUB0 917 aa19.7■□□□□ 0.74
TRAPPC3-209ENST00000616395 SMAP1Q8IYB5 467 aaPredicted RBP19.7■□□□□ 0.74
TRAPPC3-209ENST00000616395 LARP6Q9BRS8 491 aaKnown RBP19.7■□□□□ 0.74
TRAPPC3-209ENST00000616395 LLPHQ9BRT6 129 aaKnown RBP19.7■□□□□ 0.74
TRAPPC3-209ENST00000616395 RPP25Q9BUL9 199 aaKnown RBP19.7■□□□□ 0.74
TRAPPC3-209ENST00000616395 AGXT2Q9BYV1 514 aa19.7■□□□□ 0.74
TRAPPC3-209ENST00000616395 GCOM2Q9BZD3 368 aaPredicted RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms