RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 AP1B1Q10567 949 aa20.03■□□□□ 0.8
SPAST-203ENST00000615843 MIS18BP1Q6P0N0 1132 aa20.03■□□□□ 0.8
SPAST-203ENST00000615843 CYP26B1Q9NR63 512 aa20.03■□□□□ 0.8
SPAST-203ENST00000615843 UNC13AQ9UPW8 1703 aa20.03■□□□□ 0.8
SPAST-203ENST00000615843 PALLDQ8WX93 1383 aa20.03■□□□□ 0.8
SPAST-203ENST00000615843 IGBP1P78318 339 aa20.03■□□□□ 0.8
SPAST-203ENST00000615843 THAP11Q96EK4 314 aa20.03■□□□□ 0.8
SPAST-203ENST00000615843 MSTO1Q9BUK6 570 aa20.03■□□□□ 0.8
SPAST-203ENST00000615843 TSSK1BQ9BXA7 367 aa20.03■□□□□ 0.8
SPAST-203ENST00000615843 USP17L5A8MUK1 530 aa20.02■□□□□ 0.8
SPAST-203ENST00000615843 PPIP5K2O43314 1243 aa20.02■□□□□ 0.8
SPAST-203ENST00000615843 RHOBTB3O94955 611 aa20.02■□□□□ 0.8
SPAST-203ENST00000615843 ZFXP17010 805 aaPredicted RBP20.02■□□□□ 0.8
SPAST-203ENST00000615843 ANXA13P27216 316 aa20.02■□□□□ 0.8
SPAST-203ENST00000615843 ARSEP51690 589 aa20.02■□□□□ 0.8
SPAST-203ENST00000615843 PSMC1P62191 440 aaKnown RBP20.02■□□□□ 0.8
SPAST-203ENST00000615843 GRM4Q14833 912 aa20.02■□□□□ 0.8
SPAST-203ENST00000615843 MTERF2Q49AM1 385 aa20.02■□□□□ 0.8
SPAST-203ENST00000615843 TRAPPC11Q7Z392 1133 aa20.02■□□□□ 0.8
SPAST-203ENST00000615843 MARCH10Q8NA82 808 aaPredicted RBP20.02■□□□□ 0.8
SPAST-203ENST00000615843 CCSER1Q9C0I3 900 aa20.02■□□□□ 0.8
SPAST-203ENST00000615843 HPS3Q969F9 1004 aa20.02■□□□□ 0.8
SPAST-203ENST00000615843 AGPAT1Q99943 283 aa20.02■□□□□ 0.8
SPAST-203ENST00000615843 ZC4H2Q9NQZ6 224 aa20.02■□□□□ 0.8
SPAST-203ENST00000615843 CLEC11AQ9Y240 323 aa20.02■□□□□ 0.8
SPAST-203ENST00000615843 FAM205CA6NFA0 338 aa20.02■□□□□ 0.8
SPAST-203ENST00000615843 E2F6O75461 281 aa20.02■□□□□ 0.8
SPAST-203ENST00000615843 SERPINB3P29508 390 aa20.02■□□□□ 0.8
SPAST-203ENST00000615843 SURF1Q15526 300 aa20.02■□□□□ 0.8
SPAST-203ENST00000615843 TMEM270Q6UE05 265 aa20.02■□□□□ 0.8
SPAST-203ENST00000615843 SLC35G2Q8TBE7 412 aa20.02■□□□□ 0.8
SPAST-203ENST00000615843 HEY1Q9Y5J3 304 aa20.02■□□□□ 0.8
SPAST-203ENST00000615843 KDM1AO60341 852 aa20.02■□□□□ 0.79
SPAST-203ENST00000615843 MYBL1P10243 752 aa20.02■□□□□ 0.79
SPAST-203ENST00000615843 ZNF18P17022 549 aa20.02■□□□□ 0.79
SPAST-203ENST00000615843 ITIH2P19823 946 aa20.02■□□□□ 0.79
SPAST-203ENST00000615843 HSD17B3P37058 310 aa20.02■□□□□ 0.79
SPAST-203ENST00000615843 CTCFP49711 727 aaPredicted RBP20.02■□□□□ 0.79
SPAST-203ENST00000615843 GALCP54803 685 aa20.02■□□□□ 0.79
SPAST-203ENST00000615843 HDAC4P56524 1084 aa20.02■□□□□ 0.79
SPAST-203ENST00000615843 YWHAHQ04917 246 aaPredicted RBP20.02■□□□□ 0.79
SPAST-203ENST00000615843 ZNF394Q53GI3 561 aa20.02■□□□□ 0.79
SPAST-203ENST00000615843 MDH1BQ5I0G3 518 aa20.02■□□□□ 0.79
SPAST-203ENST00000615843 JAMLQ86YT9 394 aa20.02■□□□□ 0.79
SPAST-203ENST00000615843 ZC3H15Q8WU90 426 aaKnown RBP20.02■□□□□ 0.79
SPAST-203ENST00000615843 DHX38Q92620 1227 aaKnown RBP20.02■□□□□ 0.79
SPAST-203ENST00000615843 ROPN1BQ9BZX4 212 aaPredicted RBP20.02■□□□□ 0.79
SPAST-203ENST00000615843 ROPN1Q9HAT0 212 aaPredicted RBP20.02■□□□□ 0.79
SPAST-203ENST00000615843 IP6K2Q9UHH9 426 aa20.02■□□□□ 0.79
SPAST-203ENST00000615843 SAMD9LQ8IVG5 1584 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 A0A1W2PQJ5 194 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 POTEFA5A3E0 1075 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 GOLGA8RI6L899 631 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 POTEIP0CG38 1075 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 HIF1AQ16665 826 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 DAB2IPQ5VWQ8 1189 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 POTEGQ6S5H5 508 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 POTEEQ6S8J3 1075 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 C4orf50Q6ZRC1 276 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 USP49Q70CQ1 688 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 MDM1Q8TC05 714 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 CCDC90BQ9GZT6 254 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 GSG1L2A8MUP6 293 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 TRIM49P0CI25 452 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 TRIM49CP0CI26 452 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 EFTUD2Q15029 972 aaKnown RBP eCLIP20.01■□□□□ 0.792e-6■■■□□ 17.4
SPAST-203ENST00000615843 OLFML2BQ68BL8 750 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 SNX25Q9H3E2 840 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 STX18Q9P2W9 335 aaKnown RBP20.01■□□□□ 0.79
SPAST-203ENST00000615843 TFR2Q9UP52 801 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 ZNF609O15014 1411 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 SUPT3HO75486 399 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 ABL1P00519 1130 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 UBTFL6P0CB48 400 aaPredicted RBP20.01■□□□□ 0.79
SPAST-203ENST00000615843 SLFN12LQ6IEE8 588 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 TEKT4Q8WW24 435 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 EXT2Q93063 718 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 NBPF3Q9H094 633 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 PCDHA6Q9UN73 950 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 PCDHA8Q9Y5H6 950 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 NEK2P51955 445 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 NAB2Q15742 525 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 ERFEQ4G0M1 354 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 C4orf33Q8N1A6 199 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 BBS5Q8N3I7 341 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 CCNYL1Q8N7R7 359 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 IL25Q9H293 177 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 LZTS1Q9Y250 596 aa20.01■□□□□ 0.79
SPAST-203ENST00000615843 ZBTB5O15062 677 aa20■□□□□ 0.79
SPAST-203ENST00000615843 SCTRP47872 440 aa20■□□□□ 0.79
SPAST-203ENST00000615843 ZBTB41Q5SVQ8 909 aa20■□□□□ 0.79
SPAST-203ENST00000615843 ERVV-1B6SEH8 477 aa20■□□□□ 0.79
SPAST-203ENST00000615843 OSTNP61366 133 aa20■□□□□ 0.79
SPAST-203ENST00000615843 RBM43Q6ZSC3 357 aaKnown RBP20■□□□□ 0.79
SPAST-203ENST00000615843 RBM15Q96T37 977 aaKnown RBP eCLIP20■□□□□ 0.79
SPAST-203ENST00000615843 LOC102724428A0A0B4J2F2 783 aa20■□□□□ 0.79
SPAST-203ENST00000615843 FDPSP14324 419 aaKnown RBP20■□□□□ 0.79
SPAST-203ENST00000615843 VHLP40337 213 aa20■□□□□ 0.79
SPAST-203ENST00000615843 SIK1P57059 783 aa20■□□□□ 0.79
SPAST-203ENST00000615843 ANKMY2Q8IV38 441 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms