RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 RIOX1Q9H6W3 641 aa17.82■□□□□ 0.44
TSKU-205ENST00000612930 USP17L5A8MUK1 530 aa17.81■□□□□ 0.44
TSKU-205ENST00000612930 KRT18P05783 430 aaKnown RBP17.81■□□□□ 0.44
TSKU-205ENST00000612930 TAC1P20366 129 aa17.81■□□□□ 0.44
TSKU-205ENST00000612930 SMARCA1P28370 1054 aa17.81■□□□□ 0.44
TSKU-205ENST00000612930 FOXN2P32314 431 aa17.81■□□□□ 0.44
TSKU-205ENST00000612930 KCNJ1P48048 391 aa17.81■□□□□ 0.44
TSKU-205ENST00000612930 UBE2SQ16763 222 aa17.81■□□□□ 0.44
TSKU-205ENST00000612930 CYP4X1Q8N118 509 aa17.81■□□□□ 0.44
TSKU-205ENST00000612930 ENDOVQ8N8Q3 282 aaKnown RBP17.81■□□□□ 0.44
TSKU-205ENST00000612930 NUDCD1Q96RS6 583 aa17.81■□□□□ 0.44
TSKU-205ENST00000612930 RPS6KC1Q96S38 1066 aa17.81■□□□□ 0.44
TSKU-205ENST00000612930 POP1Q99575 1024 aaKnown RBP17.81■□□□□ 0.44
TSKU-205ENST00000612930 USP40Q9NVE5 1235 aa17.81■□□□□ 0.44
TSKU-205ENST00000612930 C2CD2Q9Y426 696 aa17.81■□□□□ 0.44
TSKU-205ENST00000612930 CAMTA2O94983 1202 aa17.81■□□□□ 0.44
TSKU-205ENST00000612930 TARSP26639 723 aaKnown RBP17.81■□□□□ 0.44
TSKU-205ENST00000612930 COILP38432 576 aaPredicted RBP17.81■□□□□ 0.44
TSKU-205ENST00000612930 SLC12A3P55017 1021 aa17.81■□□□□ 0.44
TSKU-205ENST00000612930 CTTNQ14247 550 aaKnown RBP17.81■□□□□ 0.44
TSKU-205ENST00000612930 DRAP1Q14919 205 aaPredicted RBP17.81■□□□□ 0.44
TSKU-205ENST00000612930 PPP1R15BQ5SWA1 713 aa17.81■□□□□ 0.44
TSKU-205ENST00000612930 TMEM154Q6P9G4 183 aa17.81■□□□□ 0.44
TSKU-205ENST00000612930 FAM43BQ6ZT52 329 aaPredicted RBP17.81■□□□□ 0.44
TSKU-205ENST00000612930 SEPT14Q6ZU15 432 aa17.81■□□□□ 0.44
TSKU-205ENST00000612930 CYFIP1Q7L576 1253 aa17.81■□□□□ 0.44
TSKU-205ENST00000612930 EPM2AIP1Q7L775 607 aaPredicted RBP17.81■□□□□ 0.44
TSKU-205ENST00000612930 AGGF1Q8N302 714 aaeCLIP17.81■□□□□ 0.44
TSKU-205ENST00000612930 SUPT20HQ8NEM7 779 aa17.81■□□□□ 0.44
TSKU-205ENST00000612930 GPR88Q9GZN0 384 aa17.81■□□□□ 0.44
TSKU-205ENST00000612930 HAO1Q9UJM8 370 aa17.81■□□□□ 0.44
TSKU-205ENST00000612930 MAST2Q6P0Q8 1798 aa17.8■□□□□ 0.44
TSKU-205ENST00000612930 TTLL1O95922 423 aa17.8■□□□□ 0.44
TSKU-205ENST00000612930 ACADSP16219 412 aa17.8■□□□□ 0.44
TSKU-205ENST00000612930 PTDSS1P48651 473 aaKnown RBP17.8■□□□□ 0.44
TSKU-205ENST00000612930 TNIP1Q15025 636 aa17.8■□□□□ 0.44
TSKU-205ENST00000612930 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.8■□□□□ 0.44
TSKU-205ENST00000612930 TTC8Q8TAM2 541 aa17.8■□□□□ 0.44
TSKU-205ENST00000612930 CHKBQ9Y259 395 aa17.8■□□□□ 0.44
TSKU-205ENST00000612930 SNED1Q8TER0 1413 aa17.8■□□□□ 0.44
TSKU-205ENST00000612930 PDXKO00764 312 aa17.8■□□□□ 0.44
TSKU-205ENST00000612930 MARCH6O60337 910 aa17.8■□□□□ 0.44
TSKU-205ENST00000612930 NR3C1P04150 777 aa17.8■□□□□ 0.44
TSKU-205ENST00000612930 SP100P23497 879 aaPredicted RBP17.8■□□□□ 0.44
TSKU-205ENST00000612930 CNGA1P29973 690 aa17.8■□□□□ 0.44
TSKU-205ENST00000612930 SFR1Q86XK3 245 aa17.8■□□□□ 0.44
TSKU-205ENST00000612930 CCDC105Q8IYK2 499 aa17.8■□□□□ 0.44
TSKU-205ENST00000612930 ZFAND2BQ8WV99 257 aa17.8■□□□□ 0.44
TSKU-205ENST00000612930 ERP27Q96DN0 273 aa17.8■□□□□ 0.44
TSKU-205ENST00000612930 TAOK3Q9H2K8 898 aa17.8■□□□□ 0.44
TSKU-205ENST00000612930 DHX36Q9H2U1 1008 aaKnown RBP17.8■□□□□ 0.44
TSKU-205ENST00000612930 ASTN1O14525 1302 aa17.8■□□□□ 0.44
TSKU-205ENST00000612930 GTPBP10A4D1E9 387 aaKnown RBP17.79■□□□□ 0.44
TSKU-205ENST00000612930 ANKRD62A6NC57 917 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 H0Y3Z8 333 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 CALUO43852 315 aaPredicted RBP17.79■□□□□ 0.44
TSKU-205ENST00000612930 MED24O75448 989 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 ATP5DP30049 168 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 HIBADHP31937 336 aaKnown RBP17.79■□□□□ 0.44
TSKU-205ENST00000612930 CHKAP35790 457 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 KLC1Q07866 573 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 GIT2Q14161 759 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 CYP1B1Q16678 543 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 MTHFD1LQ6UB35 978 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 FAM47EQ6ZV65 393 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 INTS8Q75QN2 995 aaKnown RBP17.79■□□□□ 0.44
TSKU-205ENST00000612930 VSIG1Q86XK7 387 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 DZIP1Q86YF9 867 aaKnown RBP17.79■□□□□ 0.44
TSKU-205ENST00000612930 APLFQ8IW19 511 aaPredicted RBP17.79■□□□□ 0.44
TSKU-205ENST00000612930 SLC7A6OSQ96CW6 309 aaPredicted RBP17.79■□□□□ 0.44
TSKU-205ENST00000612930 ZSWIM1Q9BR11 485 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 STK33Q9BYT3 514 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 METTL14Q9HCE5 456 aaKnown RBP17.79■□□□□ 0.44
TSKU-205ENST00000612930 WDR35Q9P2L0 1181 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 SAP30BPQ9UHR5 308 aaKnown RBP17.79■□□□□ 0.44
TSKU-205ENST00000612930 DNAJC12Q9UKB3 198 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 FRMPD2Q68DX3 1309 aaPredicted RBP17.79■□□□□ 0.44
TSKU-205ENST00000612930 CLIC2O15247 247 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 EYA4O95677 639 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 T-ENOLP0DO92 83 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 CETPP11597 493 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 RFC4P35249 363 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 POLGP54098 1239 aaPredicted RBP17.79■□□□□ 0.44
TSKU-205ENST00000612930 SIX1Q15475 284 aaPredicted RBP17.79■□□□□ 0.44
TSKU-205ENST00000612930 RNF220Q5VTB9 566 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 INTS5Q6P9B9 1019 aaKnown RBP17.79■□□□□ 0.44
TSKU-205ENST00000612930 LONP2Q86WA8 852 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 TGFBRAP1Q8WUH2 860 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 DNAJC9Q8WXX5 260 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 CELF1Q92879 486 aaKnown RBP17.79■□□□□ 0.44
TSKU-205ENST00000612930 GRAMD1AQ96CP6 724 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 EYA3Q99504 573 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 TBC1D10AQ9BXI6 508 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 PITPNM3Q9BZ71 974 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 KIAA1683Q9H0B3 1180 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 BCAS3Q9H6U6 928 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 PCDHB13Q9Y5F0 798 aa17.79■□□□□ 0.44
TSKU-205ENST00000612930 TMEM110-MUSTN1A8MSY1 372 aa17.78■□□□□ 0.44
TSKU-205ENST00000612930 MIF4GDA9UHW6 222 aaKnown RBP17.78■□□□□ 0.44
TSKU-205ENST00000612930 ATP5HO75947 161 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms