RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 DRC1Q96MC2 740 aa12.52□□□□□ -0.41
CCL3L3-201ENST00000612839 REEP2Q9BRK0 252 aa12.52□□□□□ -0.41
CCL3L3-201ENST00000612839 KIFC3Q9BVG8 833 aa12.52□□□□□ -0.41
CCL3L3-201ENST00000612839 TRAIPQ9BWF2 469 aa12.52□□□□□ -0.41
CCL3L3-201ENST00000612839 RC3H2Q9HBD1 1191 aaKnown RBP12.52□□□□□ -0.41
CCL3L3-201ENST00000612839 DACT1Q9NYF0 836 aa12.52□□□□□ -0.41
CCL3L3-201ENST00000612839 PIN4Q9Y237 131 aaKnown RBP12.52□□□□□ -0.41
CCL3L3-201ENST00000612839 INSL6Q9Y581 213 aa12.52□□□□□ -0.41
CCL3L3-201ENST00000612839 FNDC1Q4ZHG4 1894 aaPredicted RBP12.51□□□□□ -0.41
CCL3L3-201ENST00000612839 CHD9Q3L8U1 2897 aa12.51□□□□□ -0.41
CCL3L3-201ENST00000612839 TMEM265A0A087WTH1 108 aa12.51□□□□□ -0.41
CCL3L3-201ENST00000612839 A0A0U1RQF3 1178 aa12.51□□□□□ -0.41
CCL3L3-201ENST00000612839 DGKIO75912 1065 aa12.51□□□□□ -0.41
CCL3L3-201ENST00000612839 ERLIN2O94905 339 aa12.51□□□□□ -0.41
CCL3L3-201ENST00000612839 STAT6P42226 847 aa12.51□□□□□ -0.41
CCL3L3-201ENST00000612839 NPTX2P47972 431 aa12.51□□□□□ -0.41
CCL3L3-201ENST00000612839 E2F4Q16254 413 aa12.51□□□□□ -0.41
CCL3L3-201ENST00000612839 ZNF697Q5TEC3 545 aa12.51□□□□□ -0.41
CCL3L3-201ENST00000612839 RESP18Q5W5W9 173 aa12.51□□□□□ -0.41
CCL3L3-201ENST00000612839 ZNF689Q96CS4 500 aaPredicted RBP12.51□□□□□ -0.41
CCL3L3-201ENST00000612839 YME1L1Q96TA2 773 aa12.51□□□□□ -0.41
CCL3L3-201ENST00000612839 SCAND2PQ9GZW5 306 aaPredicted RBP12.51□□□□□ -0.41
CCL3L3-201ENST00000612839 CCDC113Q9H0I3 377 aa12.51□□□□□ -0.41
CCL3L3-201ENST00000612839 FZD8Q9H461 694 aa12.51□□□□□ -0.41
CCL3L3-201ENST00000612839 ZNF576Q9H609 170 aa12.51□□□□□ -0.41
CCL3L3-201ENST00000612839 ELAC1Q9H777 363 aaKnown RBP12.51□□□□□ -0.41
CCL3L3-201ENST00000612839 C17orf75Q9HAS0 396 aa12.51□□□□□ -0.41
CCL3L3-201ENST00000612839 SLC28A3Q9HAS3 691 aa12.51□□□□□ -0.41
CCL3L3-201ENST00000612839 GDPD2Q9HCC8 539 aa12.51□□□□□ -0.41
CCL3L3-201ENST00000612839 CHD7Q9P2D1 2997 aa12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 B4GALT5O43286 388 aa12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 EDN1P05305 212 aa12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 STAG3L1P0CL83 205 aa12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 ATF7P17544 494 aaPredicted RBP12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 ARF4P18085 180 aaPredicted RBP12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 IBSPP21815 317 aaPredicted RBP12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 TAP1Q03518 808 aa12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 DMP1Q13316 513 aaPredicted RBP12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 GIT2Q14161 759 aa12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 PPP2R2DQ66LE6 453 aa12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 ADALQ6DHV7 355 aa12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 TWF2Q6IBS0 349 aaKnown RBP12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 SPRED2Q7Z698 418 aa12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 ECHDC2Q86YB7 292 aa12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 ZBTB8OSQ8IWT0 167 aa12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 DEFB123Q8N688 67 aa12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 DEPTORQ8TB45 409 aa12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 FAM161BQ96MY7 647 aa12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 NTPCRQ9BSD7 190 aaKnown RBP12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 C2orf40Q9H1Z8 148 aa12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 SEMA6BQ9H3T3 888 aa12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 TMEM161AQ9NX61 479 aa12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 ODF2LQ9ULJ1 636 aa12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 PCDHB7Q9Y5E2 793 aa12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 NLRC5Q86WI3 1866 aa12.5□□□□□ -0.41
CCL3L3-201ENST00000612839 LINC01553A4QN01 128 aa12.49□□□□□ -0.41
CCL3L3-201ENST00000612839 MYMKA6NI61 221 aa12.49□□□□□ -0.41
CCL3L3-201ENST00000612839 CCDC169A6NNP5 214 aa12.49□□□□□ -0.41
CCL3L3-201ENST00000612839 PLS3P13797 630 aa12.49□□□□□ -0.41
CCL3L3-201ENST00000612839 AXLP30530 894 aa12.49□□□□□ -0.41
CCL3L3-201ENST00000612839 GATMP50440 423 aa12.49□□□□□ -0.41
CCL3L3-201ENST00000612839 ZNF131P52739 623 aa12.49□□□□□ -0.41
CCL3L3-201ENST00000612839 MAPK6Q16659 721 aa12.49□□□□□ -0.41
CCL3L3-201ENST00000612839 FAM187BQ17R55 369 aa12.49□□□□□ -0.41
CCL3L3-201ENST00000612839 UBXN11Q5T124 520 aa12.49□□□□□ -0.41
CCL3L3-201ENST00000612839 SV2BQ7L1I2 683 aa12.49□□□□□ -0.41
CCL3L3-201ENST00000612839 ZNF598Q86UK7 904 aaKnown RBP12.49□□□□□ -0.41
CCL3L3-201ENST00000612839 CPB2Q96IY4 423 aa12.49□□□□□ -0.41
CCL3L3-201ENST00000612839 PRIMPOLQ96LW4 560 aa12.49□□□□□ -0.41
CCL3L3-201ENST00000612839 KMT5AQ9NQR1 393 aa12.49□□□□□ -0.41
CCL3L3-201ENST00000612839 FAM105AQ9NUU6 356 aa12.49□□□□□ -0.41
CCL3L3-201ENST00000612839 PRMT7Q9NVM4 692 aaPredicted RBP12.49□□□□□ -0.41
CCL3L3-201ENST00000612839 ARHGAP28Q9P2N2 729 aa12.49□□□□□ -0.41
CCL3L3-201ENST00000612839 LRFN2Q9ULH4 789 aa12.49□□□□□ -0.41
CCL3L3-201ENST00000612839 CNTNAP2Q9UHC6 1331 aa12.49□□□□□ -0.41
CCL3L3-201ENST00000612839 KIAA1671Q9BY89 1806 aa12.48□□□□□ -0.41
CCL3L3-201ENST00000612839 A0A1B0GUA9 196 aa12.48□□□□□ -0.41
CCL3L3-201ENST00000612839 SLC16A4O15374 487 aa12.48□□□□□ -0.41
CCL3L3-201ENST00000612839 POLR2DO15514 142 aaKnown RBP12.48□□□□□ -0.41
CCL3L3-201ENST00000612839 ZNF623O75123 536 aa12.48□□□□□ -0.41
CCL3L3-201ENST00000612839 FGFR1P11362 822 aa12.48□□□□□ -0.41
CCL3L3-201ENST00000612839 CMA1P23946 247 aa12.48□□□□□ -0.41
CCL3L3-201ENST00000612839 EFNA5P52803 228 aa12.48□□□□□ -0.41
CCL3L3-201ENST00000612839 GRIN2CQ14957 1233 aa12.48□□□□□ -0.41
CCL3L3-201ENST00000612839 NOTUMQ6P988 496 aa12.48□□□□□ -0.41
CCL3L3-201ENST00000612839 DYMQ7RTS9 669 aa12.48□□□□□ -0.41
CCL3L3-201ENST00000612839 TAS1R3Q7RTX0 852 aa12.48□□□□□ -0.41
CCL3L3-201ENST00000612839 SPIRE2Q8WWL2 714 aa12.48□□□□□ -0.41
CCL3L3-201ENST00000612839 DDX12PQ92771 950 aa12.48□□□□□ -0.41
CCL3L3-201ENST00000612839 DHX58Q96C10 678 aa12.48□□□□□ -0.41
CCL3L3-201ENST00000612839 RNF19AQ9NV58 838 aa12.48□□□□□ -0.41
CCL3L3-201ENST00000612839 KBTBD4Q9NVX7 518 aa12.48□□□□□ -0.41
CCL3L3-201ENST00000612839 MTMR10Q9NXD2 777 aa12.48□□□□□ -0.41
CCL3L3-201ENST00000612839 FAM13BQ9NYF5 915 aa12.48□□□□□ -0.41
CCL3L3-201ENST00000612839 LARSQ9P2J5 1176 aaKnown RBP12.48□□□□□ -0.41
CCL3L3-201ENST00000612839 USP20Q9Y2K6 914 aa12.48□□□□□ -0.41
CCL3L3-201ENST00000612839 RALGAPA2Q2PPJ7 1873 aa12.48□□□□□ -0.41
CCL3L3-201ENST00000612839 PHLPP2Q6ZVD8 1323 aa12.48□□□□□ -0.41
CCL3L3-201ENST00000612839 MEIS3P2A8K0S8 358 aa12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 K7ERI5 159 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms