RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 OTOP3Q7RTS5 596 aa26.3■■□□□ 1.8
MMP28-203ENST00000612672 PPFIBP1Q86W92 1011 aa26.3■■□□□ 1.8
MMP28-203ENST00000612672 RSPH1Q8WYR4 309 aa26.3■■□□□ 1.8
MMP28-203ENST00000612672 MBOAT7Q96N66 472 aa26.3■■□□□ 1.8
MMP28-203ENST00000612672 WRAP73Q9P2S5 460 aaPredicted RBP26.3■■□□□ 1.8
MMP28-203ENST00000612672 CYP3A7-CYP3A51PA0A087WV96 503 aa26.29■■□□□ 1.8
MMP28-203ENST00000612672 KRBA1A5PL33 1030 aa26.29■■□□□ 1.8
MMP28-203ENST00000612672 F8W810 466 aa26.29■■□□□ 1.8
MMP28-203ENST00000612672 M0R2N6 131 aa26.29■■□□□ 1.8
MMP28-203ENST00000612672 SKIP12755 728 aa26.29■■□□□ 1.8
MMP28-203ENST00000612672 IFNAR1P17181 557 aa26.29■■□□□ 1.8
MMP28-203ENST00000612672 CYP3A7P24462 503 aa26.29■■□□□ 1.8
MMP28-203ENST00000612672 HOXA11P31270 313 aaPredicted RBP26.29■■□□□ 1.8
MMP28-203ENST00000612672 CCT2P78371 535 aaKnown RBP26.29■■□□□ 1.8
MMP28-203ENST00000612672 MRPL10Q7Z7H8 261 aaKnown RBP26.29■■□□□ 1.8
MMP28-203ENST00000612672 DTWD2Q8NBA8 298 aa26.29■■□□□ 1.8
MMP28-203ENST00000612672 MAN1C1Q9NR34 630 aa26.29■■□□□ 1.8
MMP28-203ENST00000612672 COL4A3Q01955 1670 aa26.28■■□□□ 1.8
MMP28-203ENST00000612672 C2CD2LO14523 706 aa26.28■■□□□ 1.8
MMP28-203ENST00000612672 NRP1O14786 923 aa26.28■■□□□ 1.8
MMP28-203ENST00000612672 POMCP01189 267 aa26.28■■□□□ 1.8
MMP28-203ENST00000612672 DNM2P50570 870 aa26.28■■□□□ 1.8
MMP28-203ENST00000612672 CDC42EP1Q00587 391 aa26.28■■□□□ 1.8
MMP28-203ENST00000612672 FOXK2Q01167 660 aa26.28■■□□□ 1.8
MMP28-203ENST00000612672 EMILIN2Q9BXX0 1053 aa26.28■■□□□ 1.8
MMP28-203ENST00000612672 RSAD1Q9HA92 442 aa26.28■■□□□ 1.8
MMP28-203ENST00000612672 FANCMQ8IYD8 2048 aa26.27■■□□□ 1.8
MMP28-203ENST00000612672 SPDYE4A6NLX3 237 aa26.27■■□□□ 1.8
MMP28-203ENST00000612672 SLC37A4O43826 429 aa26.27■■□□□ 1.8
MMP28-203ENST00000612672 EFEMP2O95967 443 aa26.27■■□□□ 1.8
MMP28-203ENST00000612672 AKAP17AQ02040 695 aaKnown RBP26.27■■□□□ 1.8
MMP28-203ENST00000612672 POTEGQ6S5H5 508 aa26.27■■□□□ 1.8
MMP28-203ENST00000612672 C15orf39Q6ZRI6 1047 aa26.27■■□□□ 1.8
MMP28-203ENST00000612672 MYADMQ96S97 322 aa26.27■■□□□ 1.8
MMP28-203ENST00000612672 INO80BQ9C086 356 aaPredicted RBP26.27■■□□□ 1.8
MMP28-203ENST00000612672 BMP2KQ9NSY1 1161 aaPredicted RBP26.27■■□□□ 1.8
MMP28-203ENST00000612672 FBXL21Q9UKT6 434 aa26.27■■□□□ 1.8
MMP28-203ENST00000612672 PRG3Q9Y2Y8 225 aaPredicted RBP26.27■■□□□ 1.8
MMP28-203ENST00000612672 COL4A3BPQ9Y5P4 624 aa26.27■■□□□ 1.8
MMP28-203ENST00000612672 OTOGLQ3ZCN5 2332 aa26.26■■□□□ 1.79
MMP28-203ENST00000612672 RFPL2O75678 378 aa26.26■■□□□ 1.79
MMP28-203ENST00000612672 CFHP08603 1231 aa26.26■■□□□ 1.79
MMP28-203ENST00000612672 RPS6KB1P23443 525 aa26.26■■□□□ 1.79
MMP28-203ENST00000612672 PDIA3P30101 505 aaKnown RBP26.26■■□□□ 1.79
MMP28-203ENST00000612672 NLRP5P59047 1200 aa26.26■■□□□ 1.79
MMP28-203ENST00000612672 BLOC1S2Q6QNY1 142 aa26.26■■□□□ 1.79
MMP28-203ENST00000612672 RNF168Q8IYW5 571 aaPredicted RBP26.26■■□□□ 1.79
MMP28-203ENST00000612672 FBXL16Q8N461 479 aa26.26■■□□□ 1.79
MMP28-203ENST00000612672 SMG8Q8ND04 991 aaKnown RBP26.26■■□□□ 1.79
MMP28-203ENST00000612672 URGCPQ8TCY9 931 aa26.26■■□□□ 1.79
MMP28-203ENST00000612672 TMEM143Q96AN5 459 aa26.26■■□□□ 1.79
MMP28-203ENST00000612672 PGBD4Q96DM1 585 aa26.26■■□□□ 1.79
MMP28-203ENST00000612672 AIFM3Q96NN9 605 aa26.26■■□□□ 1.79
MMP28-203ENST00000612672 TMEM175Q9BSA9 504 aa26.26■■□□□ 1.79
MMP28-203ENST00000612672 HERC2P3Q9BVR0 1158 aa26.26■■□□□ 1.79
MMP28-203ENST00000612672 VAV3Q9UKW4 847 aa26.26■■□□□ 1.79
MMP28-203ENST00000612672 PCDHA4Q9UN74 947 aa26.26■■□□□ 1.79
MMP28-203ENST00000612672 FAN1Q9Y2M0 1017 aa26.26■■□□□ 1.79
MMP28-203ENST00000612672 TEX28O15482 410 aa26.25■■□□□ 1.79
MMP28-203ENST00000612672 SOD2P04179 222 aa26.25■■□□□ 1.79
MMP28-203ENST00000612672 CMASQ8NFW8 434 aaPredicted RBP26.25■■□□□ 1.79
MMP28-203ENST00000612672 ZNF707Q96C28 371 aaPredicted RBP26.25■■□□□ 1.79
MMP28-203ENST00000612672 RNF39Q9H2S5 420 aa26.25■■□□□ 1.79
MMP28-203ENST00000612672 SH3GLB2Q9NR46 395 aa26.25■■□□□ 1.79
MMP28-203ENST00000612672 MRPL17Q9NRX2 175 aaKnown RBP26.25■■□□□ 1.79
MMP28-203ENST00000612672 CEP250Q9BV73 2442 aa26.25■■□□□ 1.79
MMP28-203ENST00000612672 CLUHO75153 1309 aa26.24■■□□□ 1.79
MMP28-203ENST00000612672 CARNS1A5YM72 827 aa26.24■■□□□ 1.79
MMP28-203ENST00000612672 CDC45O75419 566 aa26.24■■□□□ 1.79
MMP28-203ENST00000612672 HSPA4P34932 840 aa26.24■■□□□ 1.79
MMP28-203ENST00000612672 ID4P47928 161 aa26.24■■□□□ 1.79
MMP28-203ENST00000612672 AK2P54819 239 aa26.24■■□□□ 1.79
MMP28-203ENST00000612672 PSMC5P62195 406 aa26.24■■□□□ 1.79
MMP28-203ENST00000612672 COLGALT2Q8IYK4 626 aa26.24■■□□□ 1.79
MMP28-203ENST00000612672 PRPF31Q8WWY3 499 aaKnown RBP26.24■■□□□ 1.79
MMP28-203ENST00000612672 RPS6KC1Q96S38 1066 aa26.24■■□□□ 1.79
MMP28-203ENST00000612672 RTP3Q9BQQ7 232 aa26.24■■□□□ 1.79
MMP28-203ENST00000612672 EIF2AQ9BY44 585 aaKnown RBP26.24■■□□□ 1.79
MMP28-203ENST00000612672 MIOSQ9NXC5 875 aa26.24■■□□□ 1.79
MMP28-203ENST00000612672 CCDC195A0A1B0GUA6 201 aa26.23■■□□□ 1.79
MMP28-203ENST00000612672 INPPL1O15357 1258 aa26.23■■□□□ 1.79
MMP28-203ENST00000612672 SRGAP2CP0DJJ0 459 aa26.23■■□□□ 1.79
MMP28-203ENST00000612672 KIAA0319Q5VV43 1072 aa26.23■■□□□ 1.79
MMP28-203ENST00000612672 ST13P5Q8NFI4 369 aaPredicted RBP26.23■■□□□ 1.79
MMP28-203ENST00000612672 B3GALT6Q96L58 329 aa26.23■■□□□ 1.79
MMP28-203ENST00000612672 DHX33Q9H6R0 707 aaKnown RBP26.23■■□□□ 1.79
MMP28-203ENST00000612672 WDR6Q9NNW5 1121 aaKnown RBP26.23■■□□□ 1.79
MMP28-203ENST00000612672 IGSF9Q9P2J2 1179 aa26.23■■□□□ 1.79
MMP28-203ENST00000612672 CA14Q9ULX7 337 aa26.23■■□□□ 1.79
MMP28-203ENST00000612672 MYH15Q9Y2K3 1946 aa26.23■■□□□ 1.79
MMP28-203ENST00000612672 CNTNAP2Q9UHC6 1331 aa26.22■■□□□ 1.79
MMP28-203ENST00000612672 ALDH2P05091 517 aa26.22■■□□□ 1.79
MMP28-203ENST00000612672 URODP06132 367 aa26.22■■□□□ 1.79
MMP28-203ENST00000612672 SPATA31D3P0C874 917 aa26.22■■□□□ 1.79
MMP28-203ENST00000612672 NCLP19338 710 aaKnown RBP26.22■■□□□ 1.79
MMP28-203ENST00000612672 EVCP57679 992 aa26.22■■□□□ 1.79
MMP28-203ENST00000612672 LAMTOR4Q0VGL1 99 aa26.22■■□□□ 1.79
MMP28-203ENST00000612672 SPATA31D4Q6ZUB0 917 aa26.22■■□□□ 1.79
MMP28-203ENST00000612672 BLIDQ8IZY5 108 aa26.22■■□□□ 1.79
MMP28-203ENST00000612672 R4GN57 208 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms