RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 CCDC127Q96BQ5 260 aa14.77□□□□□ -0.04
NEK3-205ENST00000610828 HVCN1Q96D96 273 aa14.77□□□□□ -0.04
NEK3-205ENST00000610828 C17orf75Q9HAS0 396 aa14.77□□□□□ -0.04
NEK3-205ENST00000610828 PDE11AQ9HCR9 933 aa14.77□□□□□ -0.04
NEK3-205ENST00000610828 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.77□□□□□ -0.04
NEK3-205ENST00000610828 RBM12Q9NTZ6 932 aaKnown RBP14.77□□□□□ -0.04
NEK3-205ENST00000610828 RNF14Q9UBS8 474 aa14.77□□□□□ -0.04
NEK3-205ENST00000610828 GALCP54803 685 aa14.77□□□□□ -0.05
NEK3-205ENST00000610828 RPS6KA1Q15418 735 aa14.77□□□□□ -0.05
NEK3-205ENST00000610828 TERF2Q15554 542 aa14.77□□□□□ -0.05
NEK3-205ENST00000610828 LBX2Q6XYB7 198 aa14.77□□□□□ -0.05
NEK3-205ENST00000610828 GSPT2Q8IYD1 628 aaKnown RBP14.77□□□□□ -0.05
NEK3-205ENST00000610828 OLIG1Q8TAK6 271 aa14.77□□□□□ -0.05
NEK3-205ENST00000610828 HDAC7Q8WUI4 952 aa14.77□□□□□ -0.05
NEK3-205ENST00000610828 TAF4BQ92750 862 aa14.77□□□□□ -0.05
NEK3-205ENST00000610828 NTPCRQ9BSD7 190 aaKnown RBP14.77□□□□□ -0.05
NEK3-205ENST00000610828 TMEM117Q9H0C3 514 aa14.77□□□□□ -0.05
NEK3-205ENST00000610828 ATP6V0A4Q9HBG4 840 aa14.77□□□□□ -0.05
NEK3-205ENST00000610828 XPNPEP1Q9NQW7 623 aa14.77□□□□□ -0.05
NEK3-205ENST00000610828 ADARB2Q9NS39 739 aaKnown RBP14.77□□□□□ -0.05
NEK3-205ENST00000610828 BTBD7Q9P203 1132 aa14.77□□□□□ -0.05
NEK3-205ENST00000610828 INTUQ9ULD6 942 aa14.77□□□□□ -0.05
NEK3-205ENST00000610828 LCTP09848 1927 aa14.77□□□□□ -0.05
NEK3-205ENST00000610828 ARID2Q68CP9 1835 aa14.77□□□□□ -0.05
NEK3-205ENST00000610828 ATP8B3O60423 1300 aa14.76□□□□□ -0.05
NEK3-205ENST00000610828 ADGRA3Q8IWK6 1321 aa14.76□□□□□ -0.05
NEK3-205ENST00000610828 KCNK3O14649 394 aa14.76□□□□□ -0.05
NEK3-205ENST00000610828 HNRNPDLO14979 420 aaKnown RBP14.76□□□□□ -0.05
NEK3-205ENST00000610828 EIF3JO75822 258 aaKnown RBP14.76□□□□□ -0.05
NEK3-205ENST00000610828 SUPT20HL2P0C7V6 817 aa14.76□□□□□ -0.05
NEK3-205ENST00000610828 TNNT3P45378 269 aaPredicted RBP14.76□□□□□ -0.05
NEK3-205ENST00000610828 RNASE9P60153 205 aaKnown RBP14.76□□□□□ -0.05
NEK3-205ENST00000610828 SLC7A5Q01650 507 aa14.76□□□□□ -0.05
NEK3-205ENST00000610828 MAP2K1Q02750 393 aaPredicted RBP14.76□□□□□ -0.05
NEK3-205ENST00000610828 GPS2Q13227 327 aa14.76□□□□□ -0.05
NEK3-205ENST00000610828 GADL1Q6ZQY3 521 aa14.76□□□□□ -0.05
NEK3-205ENST00000610828 LRRC57Q8N9N7 239 aa14.76□□□□□ -0.05
NEK3-205ENST00000610828 TPCN2Q8NHX9 752 aa14.76□□□□□ -0.05
NEK3-205ENST00000610828 POMGNT1Q8WZA1 660 aa14.76□□□□□ -0.05
NEK3-205ENST00000610828 ZCCHC17Q9NP64 241 aaKnown RBP14.76□□□□□ -0.05
NEK3-205ENST00000610828 DMGDHQ9UI17 866 aaKnown RBP14.76□□□□□ -0.05
NEK3-205ENST00000610828 A0A0A6YYK5 440 aaPredicted RBP14.76□□□□□ -0.05
NEK3-205ENST00000610828 MYBL2P10244 700 aa14.76□□□□□ -0.05
NEK3-205ENST00000610828 ABCB4P21439 1286 aa14.76□□□□□ -0.05
NEK3-205ENST00000610828 TNFAIP3P21580 790 aa14.76□□□□□ -0.05
NEK3-205ENST00000610828 XKR3Q5GH77 459 aa14.76□□□□□ -0.05
NEK3-205ENST00000610828 ZNF526Q8TF50 670 aaPredicted RBP14.76□□□□□ -0.05
NEK3-205ENST00000610828 BICD1Q96G01 975 aa14.76□□□□□ -0.05
NEK3-205ENST00000610828 IFT74Q96LB3 600 aa14.76□□□□□ -0.05
NEK3-205ENST00000610828 GDAP1L1Q96MZ0 367 aa14.76□□□□□ -0.05
NEK3-205ENST00000610828 SYT11Q9BT88 431 aa14.76□□□□□ -0.05
NEK3-205ENST00000610828 MAF1Q9H063 256 aa14.76□□□□□ -0.05
NEK3-205ENST00000610828 PDLIM7Q9NR12 457 aa14.76□□□□□ -0.05
NEK3-205ENST00000610828 IGSF9BQ9UPX0 1349 aa14.75□□□□□ -0.05
NEK3-205ENST00000610828 MYH9P35579 1960 aaKnown RBP14.75□□□□□ -0.05
NEK3-205ENST00000610828 PTPRFP10586 1907 aa14.75□□□□□ -0.05
NEK3-205ENST00000610828 LRRIQ3A6PVS8 624 aaPredicted RBP14.75□□□□□ -0.05
NEK3-205ENST00000610828 ALDH5A1P51649 535 aaPredicted RBP14.75□□□□□ -0.05
NEK3-205ENST00000610828 POLGP54098 1239 aaPredicted RBP14.75□□□□□ -0.05
NEK3-205ENST00000610828 KIF22Q14807 665 aa14.75□□□□□ -0.05
NEK3-205ENST00000610828 C8orf74Q6P047 294 aa14.75□□□□□ -0.05
NEK3-205ENST00000610828 SLC39A4Q6P5W5 647 aa14.75□□□□□ -0.05
NEK3-205ENST00000610828 CCNI2Q6ZMN8 369 aaPredicted RBP14.75□□□□□ -0.05
NEK3-205ENST00000610828 NCAPG2Q86XI2 1143 aa14.75□□□□□ -0.05
NEK3-205ENST00000610828 PARD3BQ8TEW8 1205 aa14.75□□□□□ -0.05
NEK3-205ENST00000610828 LMBR1Q8WVP7 490 aa14.75□□□□□ -0.05
NEK3-205ENST00000610828 POP1Q99575 1024 aaKnown RBP14.75□□□□□ -0.05
NEK3-205ENST00000610828 POLR3FQ9H1D9 316 aaPredicted RBP14.75□□□□□ -0.05
NEK3-205ENST00000610828 ELP3Q9H9T3 547 aa14.75□□□□□ -0.05
NEK3-205ENST00000610828 H3BQF6 201 aa14.75□□□□□ -0.05
NEK3-205ENST00000610828 IRF6O14896 467 aa14.75□□□□□ -0.05
NEK3-205ENST00000610828 KIF4AO95239 1232 aa14.75□□□□□ -0.05
NEK3-205ENST00000610828 USP8P40818 1118 aa14.75□□□□□ -0.05
NEK3-205ENST00000610828 DAAM2Q86T65 1068 aa14.75□□□□□ -0.05
NEK3-205ENST00000610828 PALB2Q86YC2 1186 aa14.75□□□□□ -0.05
NEK3-205ENST00000610828 PPM1KQ8N3J5 372 aa14.75□□□□□ -0.05
NEK3-205ENST00000610828 CTNNBL1Q8WYA6 563 aaPredicted RBP14.75□□□□□ -0.05
NEK3-205ENST00000610828 OTUD5Q96G74 571 aa14.75□□□□□ -0.05
NEK3-205ENST00000610828 PAGR1Q9BTK6 254 aa14.75□□□□□ -0.05
NEK3-205ENST00000610828 ZNF302Q9NR11 478 aa14.75□□□□□ -0.05
NEK3-205ENST00000610828 RNF181Q9P0P0 153 aa14.75□□□□□ -0.05
NEK3-205ENST00000610828 FBXO40Q9UH90 709 aa14.75□□□□□ -0.05
NEK3-205ENST00000610828 SBF1O95248 1867 aa14.74□□□□□ -0.05
NEK3-205ENST00000610828 LOC285556D6RIA3 1793 aa14.74□□□□□ -0.05
NEK3-205ENST00000610828 A0A0U1RQG5 324 aaPredicted RBP14.74□□□□□ -0.05
NEK3-205ENST00000610828 ICAM3P32942 547 aa14.74□□□□□ -0.05
NEK3-205ENST00000610828 RTP1P59025 263 aa14.74□□□□□ -0.05
NEK3-205ENST00000610828 EMC2Q15006 297 aa14.74□□□□□ -0.05
NEK3-205ENST00000610828 KRT39Q6A163 491 aa14.74□□□□□ -0.05
NEK3-205ENST00000610828 PEX26Q7Z412 305 aa14.74□□□□□ -0.05
NEK3-205ENST00000610828 RIOX2Q8IUF8 465 aa14.74□□□□□ -0.05
NEK3-205ENST00000610828 SLC20A1Q8WUM9 679 aa14.74□□□□□ -0.05
NEK3-205ENST00000610828 KAT5Q92993 513 aa14.74□□□□□ -0.05
NEK3-205ENST00000610828 AGPAT1Q99943 283 aa14.74□□□□□ -0.05
NEK3-205ENST00000610828 SPATC1LQ9H0A9 340 aa14.74□□□□□ -0.05
NEK3-205ENST00000610828 OSGEPQ9NPF4 335 aa14.74□□□□□ -0.05
NEK3-205ENST00000610828 TAS2R14Q9NYV8 317 aa14.74□□□□□ -0.05
NEK3-205ENST00000610828 SYNGAP1Q96PV0 1343 aa14.74□□□□□ -0.05
NEK3-205ENST00000610828 TMEM253P0C7T8 217 aa14.74□□□□□ -0.05
NEK3-205ENST00000610828 IREB2P48200 963 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms