RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 VPS37CA5D8V6 355 aaPredicted RBP13.63□□□□□ -0.23
CTSA-210ENST00000606000 VWA3AA6NCI4 1184 aa13.63□□□□□ -0.23
CTSA-210ENST00000606000 PER2O15055 1255 aa13.63□□□□□ -0.23
CTSA-210ENST00000606000 ZNF623O75123 536 aa13.63□□□□□ -0.23
CTSA-210ENST00000606000 ZC3H11AO75152 810 aaKnown RBP eCLIP13.63□□□□□ -0.23
CTSA-210ENST00000606000 CYP11B2P19099 503 aa13.63□□□□□ -0.23
CTSA-210ENST00000606000 PRPHP41219 470 aa13.63□□□□□ -0.23
CTSA-210ENST00000606000 NRIP1P48552 1158 aa13.63□□□□□ -0.23
CTSA-210ENST00000606000 BCAR1P56945 870 aa13.63□□□□□ -0.23
CTSA-210ENST00000606000 LEXMQ3ZCV2 418 aa13.63□□□□□ -0.23
CTSA-210ENST00000606000 NOMO2Q5JPE7 1267 aa13.63□□□□□ -0.23
CTSA-210ENST00000606000 PLPP4Q5VZY2 271 aa13.63□□□□□ -0.23
CTSA-210ENST00000606000 DTHD1Q6ZMT9 781 aa13.63□□□□□ -0.23
CTSA-210ENST00000606000 ZNF280BQ86YH2 543 aa13.63□□□□□ -0.23
CTSA-210ENST00000606000 SLC39A11Q8N1S5 342 aa13.63□□□□□ -0.23
CTSA-210ENST00000606000 MCPH1Q8NEM0 835 aa13.63□□□□□ -0.23
CTSA-210ENST00000606000 BCL7CQ8WUZ0 217 aaPredicted RBP13.63□□□□□ -0.23
CTSA-210ENST00000606000 PLIN2Q99541 437 aa13.63□□□□□ -0.23
CTSA-210ENST00000606000 APOL6Q9BWW8 343 aa13.63□□□□□ -0.23
CTSA-210ENST00000606000 GBP3Q9H0R5 595 aa13.63□□□□□ -0.23
CTSA-210ENST00000606000 NXF3Q9H4D5 531 aaKnown RBP13.63□□□□□ -0.23
CTSA-210ENST00000606000 NRDE2Q9H7Z3 1164 aa13.63□□□□□ -0.23
CTSA-210ENST00000606000 TLR9Q9NR96 1032 aa13.63□□□□□ -0.23
CTSA-210ENST00000606000 DNAJB4Q9UDY4 337 aa13.63□□□□□ -0.23
CTSA-210ENST00000606000 IPPQ9Y573 584 aa13.63□□□□□ -0.23
CTSA-210ENST00000606000 TNFRSF10AO00220 468 aa13.62□□□□□ -0.23
CTSA-210ENST00000606000 LAD1O00515 517 aa13.62□□□□□ -0.23
CTSA-210ENST00000606000 FSCN2O14926 492 aa13.62□□□□□ -0.23
CTSA-210ENST00000606000 GLP2RO95838 553 aa13.62□□□□□ -0.23
CTSA-210ENST00000606000 SKIP12755 728 aa13.62□□□□□ -0.23
CTSA-210ENST00000606000 LIG1P18858 919 aa13.62□□□□□ -0.23
CTSA-210ENST00000606000 GRIN1Q05586 938 aa13.62□□□□□ -0.23
CTSA-210ENST00000606000 POU5F1BQ06416 359 aa13.62□□□□□ -0.23
CTSA-210ENST00000606000 PDIA5Q14554 519 aa13.62□□□□□ -0.23
CTSA-210ENST00000606000 ZRSR1Q15695 479 aaKnown RBP13.62□□□□□ -0.23
CTSA-210ENST00000606000 CTC1Q2NKJ3 1217 aa13.62□□□□□ -0.23
CTSA-210ENST00000606000 CDCA2Q69YH5 1023 aaPredicted RBP13.62□□□□□ -0.23
CTSA-210ENST00000606000 GLB1LQ6UWU2 654 aa13.62□□□□□ -0.23
CTSA-210ENST00000606000 MRPL10Q7Z7H8 261 aaKnown RBP13.62□□□□□ -0.23
CTSA-210ENST00000606000 MICAL1Q8TDZ2 1067 aa13.62□□□□□ -0.23
CTSA-210ENST00000606000 MRPS27Q92552 414 aaKnown RBP13.62□□□□□ -0.23
CTSA-210ENST00000606000 PNMA5Q96PV4 448 aa13.62□□□□□ -0.23
CTSA-210ENST00000606000 RUSC1Q9BVN2 902 aa13.62□□□□□ -0.23
CTSA-210ENST00000606000 MRPL9Q9BYD2 267 aaKnown RBP13.62□□□□□ -0.23
CTSA-210ENST00000606000 NFKBIZQ9BYH8 718 aa13.62□□□□□ -0.23
CTSA-210ENST00000606000 RSAD1Q9HA92 442 aa13.62□□□□□ -0.23
CTSA-210ENST00000606000 TDRD15B5MCY1 1934 aaKnown RBP13.61□□□□□ -0.23
CTSA-210ENST00000606000 MYH15Q9Y2K3 1946 aa13.61□□□□□ -0.23
CTSA-210ENST00000606000 HIDE1A8MVS5 230 aa13.61□□□□□ -0.23
CTSA-210ENST00000606000 DDHD2O94830 711 aa13.61□□□□□ -0.23
CTSA-210ENST00000606000 NPTXRO95502 500 aa13.61□□□□□ -0.23
CTSA-210ENST00000606000 POMCP01189 267 aa13.61□□□□□ -0.23
CTSA-210ENST00000606000 NCLP19338 710 aaKnown RBP13.61□□□□□ -0.23
CTSA-210ENST00000606000 MUTP22033 750 aa13.61□□□□□ -0.23
CTSA-210ENST00000606000 MLH1P40692 756 aa13.61□□□□□ -0.23
CTSA-210ENST00000606000 SLC11A1P49279 550 aa13.61□□□□□ -0.23
CTSA-210ENST00000606000 PLCB3Q01970 1234 aa13.61□□□□□ -0.23
CTSA-210ENST00000606000 UBE3AQ05086 875 aa13.61□□□□□ -0.23
CTSA-210ENST00000606000 CSPP1Q1MSJ5 1256 aa13.61□□□□□ -0.23
CTSA-210ENST00000606000 KRT79Q5XKE5 535 aa13.61□□□□□ -0.23
CTSA-210ENST00000606000 PTCRAQ6ISU1 281 aaPredicted RBP13.61□□□□□ -0.23
CTSA-210ENST00000606000 FAM173BQ6P4H8 233 aa13.61□□□□□ -0.23
CTSA-210ENST00000606000 NOTUMQ6P988 496 aa13.61□□□□□ -0.23
CTSA-210ENST00000606000 VN1R2Q8NFZ6 395 aa13.61□□□□□ -0.23
CTSA-210ENST00000606000 PGBD4Q96DM1 585 aa13.61□□□□□ -0.23
CTSA-210ENST00000606000 TCF25Q9BQ70 676 aa13.61□□□□□ -0.23
CTSA-210ENST00000606000 RAB34Q9BZG1 259 aa13.61□□□□□ -0.23
CTSA-210ENST00000606000 CSRNP2Q9H175 543 aa13.61□□□□□ -0.23
CTSA-210ENST00000606000 CD320Q9NPF0 282 aa13.61□□□□□ -0.23
CTSA-210ENST00000606000 ENTPD7Q9NQZ7 604 aa13.61□□□□□ -0.23
CTSA-210ENST00000606000 SPG21Q9NZD8 308 aa13.61□□□□□ -0.23
CTSA-210ENST00000606000 BARX2Q9UMQ3 279 aaPredicted RBP13.61□□□□□ -0.23
CTSA-210ENST00000606000 EYA4O95677 639 aa13.6□□□□□ -0.23
CTSA-210ENST00000606000 ITGA4P13612 1032 aa13.6□□□□□ -0.23
CTSA-210ENST00000606000 AKAP5P24588 427 aa13.6□□□□□ -0.23
CTSA-210ENST00000606000 AXLP30530 894 aa13.6□□□□□ -0.23
CTSA-210ENST00000606000 PPM1AP35813 382 aa13.6□□□□□ -0.23
CTSA-210ENST00000606000 NAMPTP43490 491 aa13.6□□□□□ -0.23
CTSA-210ENST00000606000 NDUFV1P49821 464 aa13.6□□□□□ -0.23
CTSA-210ENST00000606000 RNASELQ05823 741 aaKnown RBP13.6□□□□□ -0.23
CTSA-210ENST00000606000 ADAM15Q13444 863 aa13.6□□□□□ -0.23
CTSA-210ENST00000606000 ZBTB8OSQ8IWT0 167 aa13.6□□□□□ -0.23
CTSA-210ENST00000606000 DAW1Q8N136 415 aa13.6□□□□□ -0.23
CTSA-210ENST00000606000 DEPTORQ8TB45 409 aa13.6□□□□□ -0.23
CTSA-210ENST00000606000 LRRC15Q8TF66 581 aa13.6□□□□□ -0.23
CTSA-210ENST00000606000 AUTS2Q8WXX7 1259 aa13.6□□□□□ -0.23
CTSA-210ENST00000606000 ZFP42Q96MM3 310 aa13.6□□□□□ -0.23
CTSA-210ENST00000606000 GAD1Q99259 594 aa13.6□□□□□ -0.23
CTSA-210ENST00000606000 VN1R3Q9BXE9 311 aa13.6□□□□□ -0.23
CTSA-210ENST00000606000 CCDC113Q9H0I3 377 aa13.6□□□□□ -0.23
CTSA-210ENST00000606000 MIOSQ9NXC5 875 aa13.6□□□□□ -0.23
CTSA-210ENST00000606000 CLEC1BQ9P126 229 aa13.6□□□□□ -0.23
CTSA-210ENST00000606000 CNTNAP2Q9UHC6 1331 aa13.6□□□□□ -0.23
CTSA-210ENST00000606000 GRXCR2A6NFK2 248 aa13.59□□□□□ -0.23
CTSA-210ENST00000606000 F8W810 466 aa13.59□□□□□ -0.23
CTSA-210ENST00000606000 K7ELQ4 463 aaPredicted RBP13.59□□□□□ -0.23
CTSA-210ENST00000606000 HIP1RO75146 1068 aa13.59□□□□□ -0.23
CTSA-210ENST00000606000 PRKCBP05771 671 aa13.59□□□□□ -0.23
CTSA-210ENST00000606000 GALTP07902 379 aa13.59□□□□□ -0.23
CTSA-210ENST00000606000 SYT1P21579 422 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms