RNA–Protein interactions for RNA: ENST00000603038.1

CHCHD2P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 3, humanhuman

BASIC

Gene CHCHD2P3, Length 451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2P3-201ENST00000603038 DDHD2O94830 711 aa17.43■□□□□ 0.38
CHCHD2P3-201ENST00000603038 CDC25AP30304 524 aa17.43■□□□□ 0.38
CHCHD2P3-201ENST00000603038 FXR2P51116 673 aaKnown RBP eCLIP17.43■□□□□ 0.38
CHCHD2P3-201ENST00000603038 POU5F1BQ06416 359 aa17.43■□□□□ 0.38
CHCHD2P3-201ENST00000603038 MCTP1Q6DN14 999 aa17.43■□□□□ 0.38
CHCHD2P3-201ENST00000603038 BSNDQ8WZ55 320 aa17.43■□□□□ 0.38
CHCHD2P3-201ENST00000603038 CCDC43Q96MW1 224 aaKnown RBP17.43■□□□□ 0.38
CHCHD2P3-201ENST00000603038 TCF25Q9BQ70 676 aa17.43■□□□□ 0.38
CHCHD2P3-201ENST00000603038 UPF2Q9HAU5 1272 aaKnown RBP17.43■□□□□ 0.38
CHCHD2P3-201ENST00000603038 MIOSQ9NXC5 875 aa17.43■□□□□ 0.38
CHCHD2P3-201ENST00000603038 LZTS1Q9Y250 596 aa17.43■□□□□ 0.38
CHCHD2P3-201ENST00000603038 USP20Q9Y2K6 914 aa17.43■□□□□ 0.38
CHCHD2P3-201ENST00000603038 HES2Q9Y543 173 aa17.43■□□□□ 0.38
CHCHD2P3-201ENST00000603038 TTLL13PA6NNM8 815 aa17.42■□□□□ 0.38
CHCHD2P3-201ENST00000603038 ZC3H11AO75152 810 aaKnown RBP eCLIP17.42■□□□□ 0.38
CHCHD2P3-201ENST00000603038 GALTP07902 379 aa17.42■□□□□ 0.38
CHCHD2P3-201ENST00000603038 ARF4P18085 180 aaPredicted RBP17.42■□□□□ 0.38
CHCHD2P3-201ENST00000603038 CCT6AP40227 531 aaKnown RBP17.42■□□□□ 0.38
CHCHD2P3-201ENST00000603038 NDUFV1P49821 464 aa17.42■□□□□ 0.38
CHCHD2P3-201ENST00000603038 RAB27AP51159 221 aa17.42■□□□□ 0.38
CHCHD2P3-201ENST00000603038 TFDP1Q14186 410 aa17.42■□□□□ 0.38
CHCHD2P3-201ENST00000603038 DUSP6Q16828 381 aa17.42■□□□□ 0.38
CHCHD2P3-201ENST00000603038 PUS10Q3MIT2 529 aaKnown RBP17.42■□□□□ 0.38
CHCHD2P3-201ENST00000603038 PADI6Q6TGC4 694 aa17.42■□□□□ 0.38
CHCHD2P3-201ENST00000603038 GLB1LQ6UWU2 654 aa17.42■□□□□ 0.38
CHCHD2P3-201ENST00000603038 GJD3Q8N144 294 aa17.42■□□□□ 0.38
CHCHD2P3-201ENST00000603038 PGBD4Q96DM1 585 aa17.42■□□□□ 0.38
CHCHD2P3-201ENST00000603038 GBP3Q9H0R5 595 aa17.42■□□□□ 0.38
CHCHD2P3-201ENST00000603038 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.42■□□□□ 0.38
CHCHD2P3-201ENST00000603038 LRWD1Q9UFC0 647 aa17.42■□□□□ 0.38
CHCHD2P3-201ENST00000603038 PUF60Q9UHX1 559 aaKnown RBP17.42■□□□□ 0.38
CHCHD2P3-201ENST00000603038 CD207Q9UJ71 328 aa17.42■□□□□ 0.38
CHCHD2P3-201ENST00000603038 ERLIN2O94905 339 aa17.41■□□□□ 0.38
CHCHD2P3-201ENST00000603038 POMCP01189 267 aa17.41■□□□□ 0.38
CHCHD2P3-201ENST00000603038 CYP11B2P19099 503 aa17.41■□□□□ 0.38
CHCHD2P3-201ENST00000603038 NCLP19338 710 aaKnown RBP17.41■□□□□ 0.38
CHCHD2P3-201ENST00000603038 SLC11A1P49279 550 aa17.41■□□□□ 0.38
CHCHD2P3-201ENST00000603038 ALDH7A1P49419 539 aaKnown RBP17.41■□□□□ 0.38
CHCHD2P3-201ENST00000603038 KRT17Q04695 432 aa17.41■□□□□ 0.38
CHCHD2P3-201ENST00000603038 TMC7Q7Z402 723 aa17.41■□□□□ 0.38
CHCHD2P3-201ENST00000603038 ERMNQ8TAM6 284 aa17.41■□□□□ 0.38
CHCHD2P3-201ENST00000603038 AUTS2Q8WXX7 1259 aa17.41■□□□□ 0.38
CHCHD2P3-201ENST00000603038 PPP2R3CQ969Q6 453 aa17.41■□□□□ 0.38
CHCHD2P3-201ENST00000603038 VN1R3Q9BXE9 311 aa17.41■□□□□ 0.38
CHCHD2P3-201ENST00000603038 MRPL9Q9BYD2 267 aaKnown RBP17.41■□□□□ 0.38
CHCHD2P3-201ENST00000603038 CSRNP2Q9H175 543 aa17.41■□□□□ 0.38
CHCHD2P3-201ENST00000603038 RSAD1Q9HA92 442 aa17.41■□□□□ 0.38
CHCHD2P3-201ENST00000603038 KIAA1024Q9UPX6 916 aa17.41■□□□□ 0.38
CHCHD2P3-201ENST00000603038 IPPQ9Y573 584 aa17.41■□□□□ 0.38
CHCHD2P3-201ENST00000603038 ARHGEF35A5YM69 484 aa17.4■□□□□ 0.38
CHCHD2P3-201ENST00000603038 LRRIQ4A6NIV6 560 aa17.4■□□□□ 0.38
CHCHD2P3-201ENST00000603038 ITGA4P13612 1032 aa17.4■□□□□ 0.38
CHCHD2P3-201ENST00000603038 PPM1AP35813 382 aa17.4■□□□□ 0.38
CHCHD2P3-201ENST00000603038 RNASELQ05823 741 aaKnown RBP17.4■□□□□ 0.38
CHCHD2P3-201ENST00000603038 KCNC3Q14003 757 aa17.4■□□□□ 0.38
CHCHD2P3-201ENST00000603038 PDIA5Q14554 519 aa17.4■□□□□ 0.38
CHCHD2P3-201ENST00000603038 PDE12Q6L8Q7 609 aaKnown RBP17.4■□□□□ 0.38
CHCHD2P3-201ENST00000603038 MRPL43Q8N983 215 aaKnown RBP17.4■□□□□ 0.38
CHCHD2P3-201ENST00000603038 IGSF22Q8N9C0 903 aa17.4■□□□□ 0.38
CHCHD2P3-201ENST00000603038 MMTAG2Q9BU76 263 aaKnown RBP17.4■□□□□ 0.38
CHCHD2P3-201ENST00000603038 APOL6Q9BWW8 343 aa17.4■□□□□ 0.38
CHCHD2P3-201ENST00000603038 ENTPD7Q9NQZ7 604 aa17.4■□□□□ 0.38
CHCHD2P3-201ENST00000603038 DDX19AQ9NUU7 478 aaKnown RBP17.4■□□□□ 0.38
CHCHD2P3-201ENST00000603038 C2orf71A6NGG8 1288 aa17.39■□□□□ 0.37
CHCHD2P3-201ENST00000603038 E9PMD0 336 aa17.39■□□□□ 0.37
CHCHD2P3-201ENST00000603038 EYA4O95677 639 aa17.39■□□□□ 0.37
CHCHD2P3-201ENST00000603038 CXCL14O95715 111 aa17.39■□□□□ 0.37
CHCHD2P3-201ENST00000603038 EDN1P05305 212 aa17.39■□□□□ 0.37
CHCHD2P3-201ENST00000603038 AXLP30530 894 aa17.39■□□□□ 0.37
CHCHD2P3-201ENST00000603038 SSTR3P32745 418 aaPredicted RBP17.39■□□□□ 0.37
CHCHD2P3-201ENST00000603038 ZP2Q05996 745 aa17.39■□□□□ 0.37
CHCHD2P3-201ENST00000603038 SMAD2Q15796 467 aaKnown RBP17.39■□□□□ 0.37
CHCHD2P3-201ENST00000603038 LLGL2Q6P1M3 1020 aa17.39■□□□□ 0.37
CHCHD2P3-201ENST00000603038 NOTUMQ6P988 496 aa17.39■□□□□ 0.37
CHCHD2P3-201ENST00000603038 KCNK18Q7Z418 384 aa17.39■□□□□ 0.37
CHCHD2P3-201ENST00000603038 VPS52Q8N1B4 723 aa17.39■□□□□ 0.37
CHCHD2P3-201ENST00000603038 MCPH1Q8NEM0 835 aa17.39■□□□□ 0.37
CHCHD2P3-201ENST00000603038 IGSF21Q96ID5 467 aa17.39■□□□□ 0.37
CHCHD2P3-201ENST00000603038 GAD1Q99259 594 aa17.39■□□□□ 0.37
CHCHD2P3-201ENST00000603038 APOL5Q9BWW9 433 aa17.39■□□□□ 0.37
CHCHD2P3-201ENST00000603038 NFKBIZQ9BYH8 718 aa17.39■□□□□ 0.37
CHCHD2P3-201ENST00000603038 BHMT2Q9H2M3 363 aa17.39■□□□□ 0.37
CHCHD2P3-201ENST00000603038 NXF3Q9H4D5 531 aaKnown RBP17.39■□□□□ 0.37
CHCHD2P3-201ENST00000603038 NGRNQ9NPE2 291 aaKnown RBP17.39■□□□□ 0.37
CHCHD2P3-201ENST00000603038 RAPGEFL1Q9UHV5 662 aa17.39■□□□□ 0.37
CHCHD2P3-201ENST00000603038 SMC3Q9UQE7 1217 aa17.39■□□□□ 0.37
CHCHD2P3-201ENST00000603038 A0A1B0GUA9 196 aa17.38■□□□□ 0.37
CHCHD2P3-201ENST00000603038 C19orf67A6NJJ6 358 aa17.38■□□□□ 0.37
CHCHD2P3-201ENST00000603038 NPTXRO95502 500 aa17.38■□□□□ 0.37
CHCHD2P3-201ENST00000603038 AKAP5P24588 427 aa17.38■□□□□ 0.37
CHCHD2P3-201ENST00000603038 MCM2P49736 904 aa17.38■□□□□ 0.37
CHCHD2P3-201ENST00000603038 COASYQ13057 564 aa17.38■□□□□ 0.37
CHCHD2P3-201ENST00000603038 SMAD4Q13485 552 aaKnown RBP17.38■□□□□ 0.37
CHCHD2P3-201ENST00000603038 LARP1BQ659C4 914 aaKnown RBP17.38■□□□□ 0.37
CHCHD2P3-201ENST00000603038 SNX29Q8TEQ0 813 aa17.38■□□□□ 0.37
CHCHD2P3-201ENST00000603038 TMEM169Q96HH4 297 aa17.38■□□□□ 0.37
CHCHD2P3-201ENST00000603038 ZFP42Q96MM3 310 aa17.38■□□□□ 0.37
CHCHD2P3-201ENST00000603038 KIFC3Q9BVG8 833 aa17.38■□□□□ 0.37
CHCHD2P3-201ENST00000603038 CXCL16Q9H2A7 254 aa17.38■□□□□ 0.37
CHCHD2P3-201ENST00000603038 FZD8Q9H461 694 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms