RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 H0YGN5 161 aa22.02■■□□□ 1.12
SHKBP1-222ENST00000600320 K7ERI5 159 aa22.02■■□□□ 1.12
SHKBP1-222ENST00000600320 GPR182O15218 404 aa22.02■■□□□ 1.12
SHKBP1-222ENST00000600320 PRPF6O94906 941 aaKnown RBP22.02■■□□□ 1.12
SHKBP1-222ENST00000600320 SFPQP23246 707 aaKnown RBP eCLIP22.02■■□□□ 1.12
SHKBP1-222ENST00000600320 FAM187BQ17R55 369 aa22.02■■□□□ 1.12
SHKBP1-222ENST00000600320 KLHL40Q2TBA0 621 aa22.02■■□□□ 1.12
SHKBP1-222ENST00000600320 ISM2Q6H9L7 571 aa22.02■■□□□ 1.12
SHKBP1-222ENST00000600320 C16orf59Q7L2K0 433 aa22.02■■□□□ 1.12
SHKBP1-222ENST00000600320 EPM2AIP1Q7L775 607 aaPredicted RBP22.02■■□□□ 1.12
SHKBP1-222ENST00000600320 CCDC47Q96A33 483 aaKnown RBP22.02■■□□□ 1.12
SHKBP1-222ENST00000600320 GSDMAQ96QA5 445 aa22.02■■□□□ 1.12
SHKBP1-222ENST00000600320 IKZF4Q9H2S9 585 aa22.02■■□□□ 1.12
SHKBP1-222ENST00000600320 PRMT7Q9NVM4 692 aaPredicted RBP22.02■■□□□ 1.12
SHKBP1-222ENST00000600320 KIAA1468Q9P260 1216 aa22.02■■□□□ 1.12
SHKBP1-222ENST00000600320 TBX20Q9UMR3 447 aa22.02■■□□□ 1.12
SHKBP1-222ENST00000600320 BIN1O00499 593 aa22.01■■□□□ 1.11
SHKBP1-222ENST00000600320 ACKR2O00590 384 aa22.01■■□□□ 1.11
SHKBP1-222ENST00000600320 MGEA5O60502 916 aa22.01■■□□□ 1.11
SHKBP1-222ENST00000600320 KCNA1Q09470 495 aa22.01■■□□□ 1.11
SHKBP1-222ENST00000600320 PSMD2Q13200 908 aa22.01■■□□□ 1.11
SHKBP1-222ENST00000600320 PPIGQ13427 754 aaKnown RBP eCLIP22.01■■□□□ 1.11
SHKBP1-222ENST00000600320 CCDC183Q5T5S1 534 aa22.01■■□□□ 1.11
SHKBP1-222ENST00000600320 PRPF38BQ5VTL8 546 aaKnown RBP22.01■■□□□ 1.11
SHKBP1-222ENST00000600320 CAVIN1Q6NZI2 390 aaKnown RBP22.01■■□□□ 1.11
SHKBP1-222ENST00000600320 SEPT8Q92599 483 aa22.01■■□□□ 1.11
SHKBP1-222ENST00000600320 CPB2Q96IY4 423 aa22.01■■□□□ 1.11
SHKBP1-222ENST00000600320 LBHD1Q9BQE6 289 aaPredicted RBP22.01■■□□□ 1.11
SHKBP1-222ENST00000600320 AGPAT5Q9NUQ2 364 aa22.01■■□□□ 1.11
SHKBP1-222ENST00000600320 H0YCG3 227 aa22■■□□□ 1.11
SHKBP1-222ENST00000600320 ERLIN2O94905 339 aa22■■□□□ 1.11
SHKBP1-222ENST00000600320 ARF4P18085 180 aaPredicted RBP22■■□□□ 1.11
SHKBP1-222ENST00000600320 HOXA11P31270 313 aaPredicted RBP22■■□□□ 1.11
SHKBP1-222ENST00000600320 HOXD13P35453 343 aa22■■□□□ 1.11
SHKBP1-222ENST00000600320 MAGEA10P43363 369 aaPredicted RBP22■■□□□ 1.11
SHKBP1-222ENST00000600320 DSC3Q14574 896 aa22■■□□□ 1.11
SHKBP1-222ENST00000600320 RBM43Q6ZSC3 357 aaKnown RBP22■■□□□ 1.11
SHKBP1-222ENST00000600320 SMYD4Q8IYR2 804 aaPredicted RBP22■■□□□ 1.11
SHKBP1-222ENST00000600320 SLC17A8Q8NDX2 589 aa22■■□□□ 1.11
SHKBP1-222ENST00000600320 SCFD1Q8WVM8 642 aa22■■□□□ 1.11
SHKBP1-222ENST00000600320 LINC01599Q8WXQ3 324 aa22■■□□□ 1.11
SHKBP1-222ENST00000600320 TARS2Q9BW92 718 aaKnown RBP22■■□□□ 1.11
SHKBP1-222ENST00000600320 RMND1Q9NWS8 449 aa22■■□□□ 1.11
SHKBP1-222ENST00000600320 BMP6P22004 513 aa21.99■■□□□ 1.11
SHKBP1-222ENST00000600320 PRPF4BQ13523 1007 aaKnown RBP21.99■■□□□ 1.11
SHKBP1-222ENST00000600320 L1TD1Q5T7N2 865 aaKnown RBP21.99■■□□□ 1.11
SHKBP1-222ENST00000600320 EEF1DP3Q658K8 133 aa21.99■■□□□ 1.11
SHKBP1-222ENST00000600320 CNKSR3Q6P9H4 555 aa21.99■■□□□ 1.11
SHKBP1-222ENST00000600320 RTN4RL1Q86UN2 441 aaPredicted RBP21.99■■□□□ 1.11
SHKBP1-222ENST00000600320 CDR2LQ86X02 465 aaPredicted RBP21.99■■□□□ 1.11
SHKBP1-222ENST00000600320 MAP4K3Q8IVH8 894 aa21.99■■□□□ 1.11
SHKBP1-222ENST00000600320 RPUSD2Q8IZ73 545 aaKnown RBP21.99■■□□□ 1.11
SHKBP1-222ENST00000600320 ZNF507Q8TCN5 953 aa21.99■■□□□ 1.11
SHKBP1-222ENST00000600320 HVCN1Q96D96 273 aa21.99■■□□□ 1.11
SHKBP1-222ENST00000600320 PRIMPOLQ96LW4 560 aa21.99■■□□□ 1.11
SHKBP1-222ENST00000600320 PIN4Q9Y237 131 aaKnown RBP21.99■■□□□ 1.11
SHKBP1-222ENST00000600320 CNTNAP2Q9UHC6 1331 aa21.99■■□□□ 1.11
SHKBP1-222ENST00000600320 EIF3DO15371 548 aaKnown RBP eCLIP21.98■■□□□ 1.11
SHKBP1-222ENST00000600320 PFKMP08237 780 aa21.98■■□□□ 1.11
SHKBP1-222ENST00000600320 STRN3Q13033 797 aa21.98■■□□□ 1.11
SHKBP1-222ENST00000600320 ALCAMQ13740 583 aa21.98■■□□□ 1.11
SHKBP1-222ENST00000600320 MORC3Q14149 939 aa21.98■■□□□ 1.11
SHKBP1-222ENST00000600320 PCBP1Q15365 356 aaKnown RBP eCLIP21.98■■□□□ 1.11
SHKBP1-222ENST00000600320 ZNF658Q5TYW1 1059 aaPredicted RBP21.98■■□□□ 1.11
SHKBP1-222ENST00000600320 ZNF365Q70YC5 407 aa21.98■■□□□ 1.11
SHKBP1-222ENST00000600320 MRPL4Q9BYD3 311 aaKnown RBP21.98■■□□□ 1.11
SHKBP1-222ENST00000600320 PCDHB13Q9Y5F0 798 aa21.98■■□□□ 1.11
SHKBP1-222ENST00000600320 ZMYM2Q9UBW7 1377 aa21.98■■□□□ 1.11
SHKBP1-222ENST00000600320 TISP43B9A030 160 aa21.97■■□□□ 1.11
SHKBP1-222ENST00000600320 PIGRP01833 764 aa21.97■■□□□ 1.11
SHKBP1-222ENST00000600320 SCP2P22307 547 aa21.97■■□□□ 1.11
SHKBP1-222ENST00000600320 BMT2Q1RMZ1 405 aa21.97■■□□□ 1.11
SHKBP1-222ENST00000600320 TMEM240Q5SV17 173 aa21.97■■□□□ 1.11
SHKBP1-222ENST00000600320 UBXN11Q5T124 520 aa21.97■■□□□ 1.11
SHKBP1-222ENST00000600320 SLC39A4Q6P5W5 647 aa21.97■■□□□ 1.11
SHKBP1-222ENST00000600320 NELFCDQ8IXH7 590 aa21.97■■□□□ 1.11
SHKBP1-222ENST00000600320 APBB2Q92870 758 aa21.97■■□□□ 1.11
SHKBP1-222ENST00000600320 ACCSQ96QU6 501 aa21.97■■□□□ 1.11
SHKBP1-222ENST00000600320 ACO2Q99798 780 aaKnown RBP21.97■■□□□ 1.11
SHKBP1-222ENST00000600320 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.97■■□□□ 1.11
SHKBP1-222ENST00000600320 PDZD7Q9H5P4 517 aa21.97■■□□□ 1.11
SHKBP1-222ENST00000600320 MAPK8IP1Q9UQF2 711 aa21.97■■□□□ 1.11
SHKBP1-222ENST00000600320 ANKRD63C9JTQ0 380 aa21.96■■□□□ 1.11
SHKBP1-222ENST00000600320 ABLIM1O14639 778 aa21.96■■□□□ 1.11
SHKBP1-222ENST00000600320 SKOR2Q2VWA4 1001 aaPredicted RBP21.96■■□□□ 1.11
SHKBP1-222ENST00000600320 ATF7IP2Q5U623 682 aa21.96■■□□□ 1.11
SHKBP1-222ENST00000600320 STXBP4Q6ZWJ1 553 aa21.96■■□□□ 1.11
SHKBP1-222ENST00000600320 ZBTB45Q96K62 511 aaPredicted RBP21.96■■□□□ 1.11
SHKBP1-222ENST00000600320 ADAM2Q99965 735 aa21.96■■□□□ 1.11
SHKBP1-222ENST00000600320 UBE4BO95155 1302 aa21.96■■□□□ 1.11
SHKBP1-222ENST00000600320 A0A1B0GUA9 196 aa21.95■■□□□ 1.1
SHKBP1-222ENST00000600320 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.95■■□□□ 1.1
SHKBP1-222ENST00000600320 AXLP30530 894 aa21.95■■□□□ 1.1
SHKBP1-222ENST00000600320 ABCD1P33897 745 aa21.95■■□□□ 1.1
SHKBP1-222ENST00000600320 TMEM132AQ24JP5 1023 aa21.95■■□□□ 1.1
SHKBP1-222ENST00000600320 ZPBP2Q6X784 338 aa21.95■■□□□ 1.1
SHKBP1-222ENST00000600320 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.95■■□□□ 1.1
SHKBP1-222ENST00000600320 OTOP2Q7RTS6 562 aa21.95■■□□□ 1.1
SHKBP1-222ENST00000600320 MYOCDQ8IZQ8 938 aa21.95■■□□□ 1.1
SHKBP1-222ENST00000600320 BICD1Q96G01 975 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms