RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 INPPL1O15357 1258 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 NCLP19338 710 aaKnown RBP13.48□□□□□ -0.25
LIG1-217ENST00000599165 BCAR1P56945 870 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 KCNC3Q14003 757 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 TFDP1Q14186 410 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 NOMO2Q5JPE7 1267 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 HAUS3Q68CZ6 603 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 CDR2LQ86X02 465 aaPredicted RBP13.48□□□□□ -0.25
LIG1-217ENST00000599165 ZNF280BQ86YH2 543 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 ABI1Q8IZP0 508 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 DAW1Q8N136 415 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 ERMNQ8TAM6 284 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 SNX29Q8TEQ0 813 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 LRRC15Q8TF66 581 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 MRPS27Q92552 414 aaKnown RBP13.48□□□□□ -0.25
LIG1-217ENST00000599165 KHSRPQ92945 711 aaKnown RBP eCLIP13.48□□□□□ -0.25
LIG1-217ENST00000599165 MSLNLQ96KJ4 702 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 ZNF558Q96NG5 402 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 PNMA5Q96PV4 448 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 CCDC113Q9H0I3 377 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 BHMT2Q9H2M3 363 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 FZD8Q9H461 694 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 TLR9Q9NR96 1032 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 AAASQ9NRG9 546 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 DDX19AQ9NUU7 478 aaKnown RBP13.48□□□□□ -0.25
LIG1-217ENST00000599165 DNAJB4Q9UDY4 337 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 KIAA1024Q9UPX6 916 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 LZTS1Q9Y250 596 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 USP20Q9Y2K6 914 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 KIF3AQ9Y496 699 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 HES2Q9Y543 173 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 IPPQ9Y573 584 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 MYH11P35749 1972 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 TRIP11Q15643 1979 aa13.48□□□□□ -0.25
LIG1-217ENST00000599165 HIDE1A8MVS5 230 aa13.47□□□□□ -0.25
LIG1-217ENST00000599165 DDHD2O94830 711 aa13.47□□□□□ -0.25
LIG1-217ENST00000599165 SKIP12755 728 aa13.47□□□□□ -0.25
LIG1-217ENST00000599165 NRIP1P48552 1158 aa13.47□□□□□ -0.25
LIG1-217ENST00000599165 MAPK7Q13164 816 aa13.47□□□□□ -0.25
LIG1-217ENST00000599165 PCBP1Q15365 356 aaKnown RBP eCLIP13.47□□□□□ -0.25
LIG1-217ENST00000599165 CSPP1Q1MSJ5 1256 aa13.47□□□□□ -0.25
LIG1-217ENST00000599165 HYIQ5T013 277 aa13.47□□□□□ -0.25
LIG1-217ENST00000599165 LARP1BQ659C4 914 aaKnown RBP13.47□□□□□ -0.25
LIG1-217ENST00000599165 PTCRAQ6ISU1 281 aaPredicted RBP13.47□□□□□ -0.25
LIG1-217ENST00000599165 PPP4R3CPQ6ZMV5 832 aa13.47□□□□□ -0.25
LIG1-217ENST00000599165 RBM23Q86U06 439 aaKnown RBP13.47□□□□□ -0.25
LIG1-217ENST00000599165 EFHBQ8N7U6 833 aa13.47□□□□□ -0.25
LIG1-217ENST00000599165 GSTCDQ8NEC7 633 aa13.47□□□□□ -0.25
LIG1-217ENST00000599165 MCPH1Q8NEM0 835 aa13.47□□□□□ -0.25
LIG1-217ENST00000599165 KIFC3Q9BVG8 833 aa13.47□□□□□ -0.25
LIG1-217ENST00000599165 MRPL9Q9BYD2 267 aaKnown RBP13.47□□□□□ -0.25
LIG1-217ENST00000599165 CSRNP2Q9H175 543 aa13.47□□□□□ -0.25
LIG1-217ENST00000599165 NXF3Q9H4D5 531 aaKnown RBP13.47□□□□□ -0.25
LIG1-217ENST00000599165 IGFLR1Q9H665 355 aa13.47□□□□□ -0.25
LIG1-217ENST00000599165 MIOSQ9NXC5 875 aa13.47□□□□□ -0.25
LIG1-217ENST00000599165 INPP5FQ9Y2H2 1132 aa13.47□□□□□ -0.25
LIG1-217ENST00000599165 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.47□□□□□ -0.25
LIG1-217ENST00000599165 A0A1B0GUA9 196 aa13.46□□□□□ -0.25
LIG1-217ENST00000599165 ARHGEF35A5YM69 484 aa13.46□□□□□ -0.25
LIG1-217ENST00000599165 LRRIQ4A6NIV6 560 aa13.46□□□□□ -0.25
LIG1-217ENST00000599165 H3BQV1 296 aa13.46□□□□□ -0.25
LIG1-217ENST00000599165 PER2O15055 1255 aa13.46□□□□□ -0.25
LIG1-217ENST00000599165 ERLIN2O94905 339 aa13.46□□□□□ -0.25
LIG1-217ENST00000599165 GALTP07902 379 aa13.46□□□□□ -0.25
LIG1-217ENST00000599165 AXLP30530 894 aa13.46□□□□□ -0.25
LIG1-217ENST00000599165 SLC11A1P49279 550 aa13.46□□□□□ -0.25
LIG1-217ENST00000599165 GRIN1Q05586 938 aa13.46□□□□□ -0.25
LIG1-217ENST00000599165 DUSP6Q16828 381 aa13.46□□□□□ -0.25
LIG1-217ENST00000599165 FAM187BQ17R55 369 aa13.46□□□□□ -0.25
LIG1-217ENST00000599165 GLB1LQ6UWU2 654 aa13.46□□□□□ -0.25
LIG1-217ENST00000599165 DTHD1Q6ZMT9 781 aa13.46□□□□□ -0.25
LIG1-217ENST00000599165 FAM178BQ8IXR5 827 aa13.46□□□□□ -0.25
LIG1-217ENST00000599165 CCDC51Q96ER9 411 aa13.46□□□□□ -0.25
LIG1-217ENST00000599165 CCDC43Q96MW1 224 aaKnown RBP13.46□□□□□ -0.25
LIG1-217ENST00000599165 RUSC1Q9BVN2 902 aa13.46□□□□□ -0.25
LIG1-217ENST00000599165 CXCL16Q9H2A7 254 aa13.46□□□□□ -0.25
LIG1-217ENST00000599165 RSAD1Q9HA92 442 aa13.46□□□□□ -0.25
LIG1-217ENST00000599165 SPG21Q9NZD8 308 aa13.46□□□□□ -0.25
LIG1-217ENST00000599165 MYH15Q9Y2K3 1946 aa13.46□□□□□ -0.25
LIG1-217ENST00000599165 CNTNAP2Q9UHC6 1331 aa13.45□□□□□ -0.26
LIG1-217ENST00000599165 NCK2O43639 380 aa13.45□□□□□ -0.26
LIG1-217ENST00000599165 ZC3H11AO75152 810 aaKnown RBP eCLIP13.45□□□□□ -0.26
LIG1-217ENST00000599165 EYA4O95677 639 aa13.45□□□□□ -0.26
LIG1-217ENST00000599165 EFEMP2O95967 443 aa13.45□□□□□ -0.26
LIG1-217ENST00000599165 PPM1AP35813 382 aa13.45□□□□□ -0.26
LIG1-217ENST00000599165 NAMPTP43490 491 aa13.45□□□□□ -0.26
LIG1-217ENST00000599165 CLUL1Q15846 466 aa13.45□□□□□ -0.26
LIG1-217ENST00000599165 PLPP4Q5VZY2 271 aa13.45□□□□□ -0.26
LIG1-217ENST00000599165 NOTUMQ6P988 496 aa13.45□□□□□ -0.26
LIG1-217ENST00000599165 C1orf186Q6ZWK4 172 aa13.45□□□□□ -0.26
LIG1-217ENST00000599165 RSPH1Q8WYR4 309 aa13.45□□□□□ -0.26
LIG1-217ENST00000599165 PGBD4Q96DM1 585 aa13.45□□□□□ -0.26
LIG1-217ENST00000599165 IGSF21Q96ID5 467 aa13.45□□□□□ -0.26
LIG1-217ENST00000599165 ZFP42Q96MM3 310 aa13.45□□□□□ -0.26
LIG1-217ENST00000599165 GAD1Q99259 594 aa13.45□□□□□ -0.26
LIG1-217ENST00000599165 TCF25Q9BQ70 676 aa13.45□□□□□ -0.26
LIG1-217ENST00000599165 PDZD7Q9H5P4 517 aa13.45□□□□□ -0.26
LIG1-217ENST00000599165 MARCH5Q9NX47 278 aa13.45□□□□□ -0.26
LIG1-217ENST00000599165 BARX2Q9UMQ3 279 aaPredicted RBP13.45□□□□□ -0.26
LIG1-217ENST00000599165 VWA3AA6NCI4 1184 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms