RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 AKAP17AQ02040 695 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-218ENST00000598907 SNW1Q13573 536 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-218ENST00000598907 LONRF3Q496Y0 759 aa15.63■□□□□ 0.09
SHKBP1-218ENST00000598907 PLPPR4Q7Z2D5 763 aa15.63■□□□□ 0.09
SHKBP1-218ENST00000598907 DDX53Q86TM3 631 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-218ENST00000598907 METTL13Q8N6R0 699 aa15.63■□□□□ 0.09
SHKBP1-218ENST00000598907 NETO1Q8TDF5 533 aa15.63■□□□□ 0.09
SHKBP1-218ENST00000598907 WASF1Q92558 559 aa15.63■□□□□ 0.09
SHKBP1-218ENST00000598907 COL26A1Q96A83 441 aa15.63■□□□□ 0.09
SHKBP1-218ENST00000598907 IGSF21Q96ID5 467 aa15.63■□□□□ 0.09
SHKBP1-218ENST00000598907 ZNF668Q96K58 619 aaPredicted RBP15.63■□□□□ 0.09
SHKBP1-218ENST00000598907 KLHL5Q96PQ7 755 aa15.63■□□□□ 0.09
SHKBP1-218ENST00000598907 VN1R3Q9BXE9 311 aa15.63■□□□□ 0.09
SHKBP1-218ENST00000598907 EMILIN2Q9BXX0 1053 aa15.63■□□□□ 0.09
SHKBP1-218ENST00000598907 GBP3Q9H0R5 595 aa15.63■□□□□ 0.09
SHKBP1-218ENST00000598907 WDR6Q9NNW5 1121 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-218ENST00000598907 ZSCAN32Q9NX65 697 aa15.63■□□□□ 0.09
SHKBP1-218ENST00000598907 UBIAD1Q9Y5Z9 338 aa15.63■□□□□ 0.09
SHKBP1-218ENST00000598907 NUMBLQ9Y6R0 609 aa15.63■□□□□ 0.09
SHKBP1-218ENST00000598907 EVPLQ92817 2033 aa15.62■□□□□ 0.09
SHKBP1-218ENST00000598907 CCDC195A0A1B0GUA6 201 aa15.62■□□□□ 0.09
SHKBP1-218ENST00000598907 hCG_1984214I3L0E3 225 aa15.62■□□□□ 0.09
SHKBP1-218ENST00000598907 MEIS2O14770 477 aa15.62■□□□□ 0.09
SHKBP1-218ENST00000598907 BACH1O14867 736 aa15.62■□□□□ 0.09
SHKBP1-218ENST00000598907 CNPP09543 421 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-218ENST00000598907 FAM43BQ6ZT52 329 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-218ENST00000598907 TRMT1LQ7Z2T5 733 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-218ENST00000598907 FAM177A1Q8N128 213 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-218ENST00000598907 ZNF713Q8N859 430 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-218ENST00000598907 ZBTB44Q8NCP5 570 aa15.62■□□□□ 0.09
SHKBP1-218ENST00000598907 AIFM3Q96NN9 605 aa15.62■□□□□ 0.09
SHKBP1-218ENST00000598907 SDF4Q9BRK5 362 aa15.62■□□□□ 0.09
SHKBP1-218ENST00000598907 DAXXQ9UER7 740 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-218ENST00000598907 INPP5FQ9Y2H2 1132 aa15.62■□□□□ 0.09
SHKBP1-218ENST00000598907 MTF2Q9Y483 593 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-218ENST00000598907 ZFYVE26Q68DK2 2539 aa15.62■□□□□ 0.09
SHKBP1-218ENST00000598907 KANSL1LA0AUZ9 987 aa15.61■□□□□ 0.09
SHKBP1-218ENST00000598907 DDX39AO00148 427 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-218ENST00000598907 C2CD2LO14523 706 aa15.61■□□□□ 0.09
SHKBP1-218ENST00000598907 INPPL1O15357 1258 aa15.61■□□□□ 0.09
SHKBP1-218ENST00000598907 RFPL2O75678 378 aa15.61■□□□□ 0.09
SHKBP1-218ENST00000598907 STARD6P59095 220 aa15.61■□□□□ 0.09
SHKBP1-218ENST00000598907 HTR4Q13639 388 aa15.61■□□□□ 0.09
SHKBP1-218ENST00000598907 UBE2SQ16763 222 aa15.61■□□□□ 0.09
SHKBP1-218ENST00000598907 WWC2Q6AWC2 1192 aa15.61■□□□□ 0.09
SHKBP1-218ENST00000598907 FAM184AQ8NB25 1140 aa15.61■□□□□ 0.09
SHKBP1-218ENST00000598907 BBXQ8WY36 941 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-218ENST00000598907 SMG7Q92540 1137 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-218ENST00000598907 SHDQ96IW2 340 aa15.61■□□□□ 0.09
SHKBP1-218ENST00000598907 SH3GLB2Q9NR46 395 aa15.61■□□□□ 0.09
SHKBP1-218ENST00000598907 SLC2A4RGQ9NR83 387 aa15.61■□□□□ 0.09
SHKBP1-218ENST00000598907 BARHL2Q9NY43 387 aa15.61■□□□□ 0.09
SHKBP1-218ENST00000598907 SEC63Q9UGP8 760 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-218ENST00000598907 KIF3AQ9Y496 699 aa15.61■□□□□ 0.09
SHKBP1-218ENST00000598907 FASNP49327 2511 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-218ENST00000598907 DOCK8Q8NF50 2099 aa15.61■□□□□ 0.09
SHKBP1-218ENST00000598907 MYH15Q9Y2K3 1946 aa15.6■□□□□ 0.09
SHKBP1-218ENST00000598907 HBP1O60381 514 aa15.6■□□□□ 0.09
SHKBP1-218ENST00000598907 LILRB5O75023 590 aa15.6■□□□□ 0.09
SHKBP1-218ENST00000598907 GPR32O75388 356 aa15.6■□□□□ 0.09
SHKBP1-218ENST00000598907 C22orf31O95567 290 aa15.6■□□□□ 0.09
SHKBP1-218ENST00000598907 CD72P21854 359 aa15.6■□□□□ 0.09
SHKBP1-218ENST00000598907 FGFR4P22455 802 aa15.6■□□□□ 0.09
SHKBP1-218ENST00000598907 CLCN3P51790 818 aa15.6■□□□□ 0.09
SHKBP1-218ENST00000598907 RNASELQ05823 741 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-218ENST00000598907 TYW1BQ6NUM6 668 aa15.6■□□□□ 0.09
SHKBP1-218ENST00000598907 LPPQ93052 612 aa15.6■□□□□ 0.09
SHKBP1-218ENST00000598907 NXPE3Q969Y0 559 aa15.6■□□□□ 0.09
SHKBP1-218ENST00000598907 PIDD1Q9HB75 910 aa15.6■□□□□ 0.09
SHKBP1-218ENST00000598907 JADE2Q9NQC1 790 aa15.6■□□□□ 0.09
SHKBP1-218ENST00000598907 DNAJB4Q9UDY4 337 aa15.6■□□□□ 0.09
SHKBP1-218ENST00000598907 RAB23Q9ULC3 237 aa15.6■□□□□ 0.09
SHKBP1-218ENST00000598907 FRYQ5TBA9 3013 aa15.6■□□□□ 0.09
SHKBP1-218ENST00000598907 COL1A2P08123 1366 aa15.6■□□□□ 0.09
SHKBP1-218ENST00000598907 CEP295Q9C0D2 2601 aa15.6■□□□□ 0.09
SHKBP1-218ENST00000598907 FAM170BA6NMN3 283 aa15.59■□□□□ 0.09
SHKBP1-218ENST00000598907 ZBTB42B2RXF5 422 aa15.59■□□□□ 0.09
SHKBP1-218ENST00000598907 PIK3CDO00329 1044 aa15.59■□□□□ 0.09
SHKBP1-218ENST00000598907 TBC1D4O60343 1298 aa15.59■□□□□ 0.09
SHKBP1-218ENST00000598907 LAMP2P13473 410 aa15.59■□□□□ 0.09
SHKBP1-218ENST00000598907 PDIA4P13667 645 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-218ENST00000598907 PDCP20941 246 aa15.59■□□□□ 0.09
SHKBP1-218ENST00000598907 SYT1P21579 422 aa15.59■□□□□ 0.09
SHKBP1-218ENST00000598907 GPC5P78333 572 aa15.59■□□□□ 0.09
SHKBP1-218ENST00000598907 LARP1BQ659C4 914 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-218ENST00000598907 ZNF598Q86UK7 904 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-218ENST00000598907 CKAP2LQ8IYA6 745 aa15.59■□□□□ 0.09
SHKBP1-218ENST00000598907 CMASQ8NFW8 434 aaPredicted RBP15.59■□□□□ 0.09
SHKBP1-218ENST00000598907 FBXO18Q8NFZ0 1043 aa15.59■□□□□ 0.09
SHKBP1-218ENST00000598907 SCLT1Q96NL6 688 aa15.59■□□□□ 0.09
SHKBP1-218ENST00000598907 NRDE2Q9H7Z3 1164 aa15.59■□□□□ 0.09
SHKBP1-218ENST00000598907 KCNH7Q9NS40 1196 aa15.59■□□□□ 0.09
SHKBP1-218ENST00000598907 GJB4Q9NTQ9 266 aa15.59■□□□□ 0.09
SHKBP1-218ENST00000598907 AKT3Q9Y243 479 aa15.59■□□□□ 0.09
SHKBP1-218ENST00000598907 ESYT2A0FGR8 921 aa15.58■□□□□ 0.08
SHKBP1-218ENST00000598907 SPDYE3A6NKU9 549 aa15.58■□□□□ 0.08
SHKBP1-218ENST00000598907 GDF9O60383 454 aa15.58■□□□□ 0.08
SHKBP1-218ENST00000598907 GALTP07902 379 aa15.58■□□□□ 0.08
SHKBP1-218ENST00000598907 SPATA31D3P0C874 917 aa15.58■□□□□ 0.08
SHKBP1-218ENST00000598907 PMLP29590 882 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 508 ms