RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 CDC42EP1Q00587 391 aa16.15■□□□□ 0.18
SHKBP1-211ENST00000595945 MBTD1Q05BQ5 628 aa16.15■□□□□ 0.18
SHKBP1-211ENST00000595945 FAM187BQ17R55 369 aa16.15■□□□□ 0.18
SHKBP1-211ENST00000595945 ZNF410Q86VK4 478 aa16.15■□□□□ 0.18
SHKBP1-211ENST00000595945 SLC43A3Q8NBI5 491 aa16.15■□□□□ 0.18
SHKBP1-211ENST00000595945 EEF2KMTQ96G04 330 aa16.15■□□□□ 0.18
SHKBP1-211ENST00000595945 NLRP4Q96MN2 994 aa16.15■□□□□ 0.18
SHKBP1-211ENST00000595945 CTAGE1Q96RT6 745 aa16.15■□□□□ 0.18
SHKBP1-211ENST00000595945 MKNK1Q9BUB5 465 aa16.15■□□□□ 0.18
SHKBP1-211ENST00000595945 MAGEC2Q9UBF1 373 aaPredicted RBP16.15■□□□□ 0.18
SHKBP1-211ENST00000595945 OGDHLQ9ULD0 1010 aa16.15■□□□□ 0.18
SHKBP1-211ENST00000595945 ANK1P16157 1881 aa16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 A0A087WZ62 844 aa16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 GPR32O75388 356 aa16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 AKAP3O75969 853 aa16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 PRKCBP05771 671 aa16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 GARTP22102 1010 aa16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 DEKP35659 375 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 CASP4P49662 377 aa16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 STRN3Q13033 797 aa16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 NR1I3Q14994 352 aa16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 PKN2Q16513 984 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 TAF2Q6P1X5 1199 aa16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 ZPBP2Q6X784 338 aa16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 FRMD5Q7Z6J6 570 aa16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 SERINC5Q86VE9 423 aa16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 ZNF710Q8N1W2 664 aa16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 NME8Q8N427 588 aa16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 ANKRD20A12PQ8NF67 263 aa16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 ANP32BQ92688 251 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 ARMC5Q96C12 935 aa16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 BORCS6Q96GS4 357 aa16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 ZNF333Q96JL9 665 aa16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 FDXACB1Q9BRP7 624 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 CBWD1Q9BRT8 395 aa16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 MINDY3Q9H8M7 445 aa16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 RTN4Q9NQC3 1192 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 TAB2Q9NYJ8 693 aa16.14■□□□□ 0.17
SHKBP1-211ENST00000595945 A0A1W2PQ45 241 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-211ENST00000595945 A0A1W2PQY0 241 aa16.13■□□□□ 0.17
SHKBP1-211ENST00000595945 TTLL13PA6NNM8 815 aa16.13■□□□□ 0.17
SHKBP1-211ENST00000595945 ACKR2O00590 384 aa16.13■□□□□ 0.17
SHKBP1-211ENST00000595945 MYCNP04198 464 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-211ENST00000595945 NLRP11P59045 1033 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-211ENST00000595945 CCDC173Q0VFZ6 552 aa16.13■□□□□ 0.17
SHKBP1-211ENST00000595945 ITGA7Q13683 1181 aa16.13■□□□□ 0.17
SHKBP1-211ENST00000595945 AMHR2Q16671 573 aa16.13■□□□□ 0.17
SHKBP1-211ENST00000595945 MIIPQ5JXC2 388 aa16.13■□□□□ 0.17
SHKBP1-211ENST00000595945 SRGAP1Q7Z6B7 1085 aa16.13■□□□□ 0.17
SHKBP1-211ENST00000595945 RPAINQ86UA6 219 aa16.13■□□□□ 0.17
SHKBP1-211ENST00000595945 TRIM59Q8IWR1 403 aa16.13■□□□□ 0.17
SHKBP1-211ENST00000595945 DNAJB3Q8WWF6 145 aa16.13■□□□□ 0.17
SHKBP1-211ENST00000595945 ZNF668Q96K58 619 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-211ENST00000595945 TUBGCP2Q9BSJ2 902 aa16.13■□□□□ 0.17
SHKBP1-211ENST00000595945 TARS2Q9BW92 718 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-211ENST00000595945 MRPL4Q9BYD3 311 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-211ENST00000595945 FAM49AQ9H0Q0 323 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-211ENST00000595945 HSPBP1Q9NZL4 362 aa16.13■□□□□ 0.17
SHKBP1-211ENST00000595945 LGALS16A8MUM7 142 aa16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 DNM1LO00429 736 aa16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 ABLIM1O14639 778 aa16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 HNRNPDLO14979 420 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 MAPK13O15264 365 aa16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 IQCF3P0C7M6 154 aa16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 PSMC2P35998 433 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 PBX1P40424 430 aa16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 MTIF2P46199 727 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 LIG4P49917 911 aa16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 CYP2J2P51589 502 aa16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 MAPK6Q16659 721 aa16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 MAN2A1Q16706 1144 aa16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 CCDC40Q4G0X9 1142 aa16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 ARMCX5Q6P1M9 558 aa16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 XXYLT1Q8NBI6 393 aa16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 FBXL18Q96ME1 805 aa16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 GLT1D1Q96MS3 346 aa16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 DEFB118Q96PH6 123 aa16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 ACO2Q99798 780 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 HAPLN2Q9GZV7 340 aa16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 CRISPLD2Q9H0B8 497 aa16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 RNF208Q9H0X6 261 aa16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 PRMT7Q9NVM4 692 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 USP20Q9Y2K6 914 aa16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 TRIP11Q15643 1979 aa16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 CITO14578 2027 aa16.12■□□□□ 0.17
SHKBP1-211ENST00000595945 CENPFP49454 3210 aa16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 A0A0U1RQG5 324 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 KBTBD13C9JR72 458 aa16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 INO80B-WBP1J3KQ70 363 aa16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 KIAA0391O15091 583 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 TEX33O43247 280 aa16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 EXOC3O60645 756 aa16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 EPB41P11171 864 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 PROZP22891 400 aa16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 KIZQ2M2Z5 673 aa16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 FILIP1LQ4L180 1135 aa16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 FAM47CQ5HY64 1035 aa16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 SLFN12LQ6IEE8 588 aa16.11■□□□□ 0.17
SHKBP1-211ENST00000595945 TSHZ1Q6ZSZ6 1077 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms