RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 H0YCG3 227 aa24.81■■□□□ 1.56
SNRNP70-204ENST00000595231 B4GALT5O43286 388 aa24.81■■□□□ 1.56
SNRNP70-204ENST00000595231 TSPAN1O60635 241 aa24.81■■□□□ 1.56
SNRNP70-204ENST00000595231 PRIMPOLQ96LW4 560 aa24.81■■□□□ 1.56
SNRNP70-204ENST00000595231 EXOC1Q9NV70 894 aa24.81■■□□□ 1.56
SNRNP70-204ENST00000595231 ACKR2O00590 384 aa24.81■■□□□ 1.56
SNRNP70-204ENST00000595231 PRKCBP05771 671 aa24.81■■□□□ 1.56
SNRNP70-204ENST00000595231 MYBP10242 640 aa24.81■■□□□ 1.56
SNRNP70-204ENST00000595231 SCP2P22307 547 aa24.81■■□□□ 1.56
SNRNP70-204ENST00000595231 STK4Q13043 487 aa24.81■■□□□ 1.56
SNRNP70-204ENST00000595231 CNKSR3Q6P9H4 555 aa24.81■■□□□ 1.56
SNRNP70-204ENST00000595231 APBB2Q92870 758 aa24.81■■□□□ 1.56
SNRNP70-204ENST00000595231 SMARCE1Q969G3 411 aa24.81■■□□□ 1.56
SNRNP70-204ENST00000595231 GDF15Q99988 308 aa24.81■■□□□ 1.56
SNRNP70-204ENST00000595231 NUP62CLQ9H1M0 184 aa24.81■■□□□ 1.56
SNRNP70-204ENST00000595231 SLC39A2Q9NP94 309 aa24.81■■□□□ 1.56
SNRNP70-204ENST00000595231 AGPAT5Q9NUQ2 364 aa24.81■■□□□ 1.56
SNRNP70-204ENST00000595231 TBX20Q9UMR3 447 aa24.81■■□□□ 1.56
SNRNP70-204ENST00000595231 RANBP2P49792 3224 aaKnown RBP24.81■■□□□ 1.56
SNRNP70-204ENST00000595231 MGEA5O60502 916 aa24.8■■□□□ 1.56
SNRNP70-204ENST00000595231 ERLIN2O94905 339 aa24.8■■□□□ 1.56
SNRNP70-204ENST00000595231 SMC2O95347 1197 aa24.8■■□□□ 1.56
SNRNP70-204ENST00000595231 GCNT3O95395 438 aa24.8■■□□□ 1.56
SNRNP70-204ENST00000595231 PSMD2Q13200 908 aa24.8■■□□□ 1.56
SNRNP70-204ENST00000595231 NFKBIBQ15653 356 aa24.8■■□□□ 1.56
SNRNP70-204ENST00000595231 TMEM240Q5SV17 173 aa24.8■■□□□ 1.56
SNRNP70-204ENST00000595231 EPM2AIP1Q7L775 607 aaPredicted RBP24.8■■□□□ 1.56
SNRNP70-204ENST00000595231 RTN4RL1Q86UN2 441 aaPredicted RBP24.8■■□□□ 1.56
SNRNP70-204ENST00000595231 KIAA0895Q8NCT3 520 aa24.8■■□□□ 1.56
SNRNP70-204ENST00000595231 ARF4P18085 180 aaPredicted RBP24.79■■□□□ 1.56
SNRNP70-204ENST00000595231 PTMSP20962 102 aa24.79■■□□□ 1.56
SNRNP70-204ENST00000595231 KCNA1Q09470 495 aa24.79■■□□□ 1.56
SNRNP70-204ENST00000595231 DSC3Q14574 896 aa24.79■■□□□ 1.56
SNRNP70-204ENST00000595231 ZNF365Q70YC5 407 aa24.79■■□□□ 1.56
SNRNP70-204ENST00000595231 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.79■■□□□ 1.563e-11■■■□□ 16.7
SNRNP70-204ENST00000595231 KIAA1468Q9P260 1216 aa24.79■■□□□ 1.56
SNRNP70-204ENST00000595231 PRPF4BQ13523 1007 aaKnown RBP24.78■■□□□ 1.56
SNRNP70-204ENST00000595231 LINC01599Q8WXQ3 324 aa24.78■■□□□ 1.56
SNRNP70-204ENST00000595231 CPB2Q96IY4 423 aa24.78■■□□□ 1.56
SNRNP70-204ENST00000595231 FTHL17Q9BXU8 183 aa24.78■■□□□ 1.56
SNRNP70-204ENST00000595231 CHST12Q9NRB3 414 aa24.78■■□□□ 1.56
SNRNP70-204ENST00000595231 PCDHB13Q9Y5F0 798 aa24.78■■□□□ 1.56
SNRNP70-204ENST00000595231 CNTNAP2Q9UHC6 1331 aa24.78■■□□□ 1.56
SNRNP70-204ENST00000595231 A0A1B0GUA9 196 aa24.78■■□□□ 1.56
SNRNP70-204ENST00000595231 FGBP02675 491 aa24.78■■□□□ 1.56
SNRNP70-204ENST00000595231 AXLP30530 894 aa24.78■■□□□ 1.56
SNRNP70-204ENST00000595231 ABCD1P33897 745 aa24.78■■□□□ 1.56
SNRNP70-204ENST00000595231 FAM43BQ6ZT52 329 aaPredicted RBP24.78■■□□□ 1.56
SNRNP70-204ENST00000595231 MAP4K3Q8IVH8 894 aa24.78■■□□□ 1.56
SNRNP70-204ENST00000595231 PIN4Q9Y237 131 aaKnown RBP24.78■■□□□ 1.56
SNRNP70-204ENST00000595231 PRPF6O94906 941 aaKnown RBP24.77■■□□□ 1.56
SNRNP70-204ENST00000595231 HOXD13P35453 343 aa24.77■■□□□ 1.56
SNRNP70-204ENST00000595231 STRN3Q13033 797 aa24.77■■□□□ 1.56
SNRNP70-204ENST00000595231 ALCAMQ13740 583 aa24.77■■□□□ 1.56
SNRNP70-204ENST00000595231 IKBKEQ14164 716 aa24.77■■□□□ 1.56
SNRNP70-204ENST00000595231 KLHL40Q2TBA0 621 aa24.77■■□□□ 1.56
SNRNP70-204ENST00000595231 OTOP2Q7RTS6 562 aa24.77■■□□□ 1.56
SNRNP70-204ENST00000595231 ZNF507Q8TCN5 953 aa24.77■■□□□ 1.56
SNRNP70-204ENST00000595231 SCFD1Q8WVM8 642 aa24.77■■□□□ 1.56
SNRNP70-204ENST00000595231 CCDC47Q96A33 483 aaKnown RBP24.77■■□□□ 1.56
SNRNP70-204ENST00000595231 HVCN1Q96D96 273 aa24.77■■□□□ 1.56
SNRNP70-204ENST00000595231 ADAM2Q99965 735 aa24.77■■□□□ 1.56
SNRNP70-204ENST00000595231 TARS2Q9BW92 718 aaKnown RBP24.77■■□□□ 1.56
SNRNP70-204ENST00000595231 RMND1Q9NWS8 449 aa24.77■■□□□ 1.56
SNRNP70-204ENST00000595231 TMEM63CQ9P1W3 806 aa24.77■■□□□ 1.56
SNRNP70-204ENST00000595231 MAN1B1Q9UKM7 699 aa24.77■■□□□ 1.56
SNRNP70-204ENST00000595231 LAMA2P24043 3122 aaKnown RBP24.77■■□□□ 1.56
SNRNP70-204ENST00000595231 ENPP3O14638 875 aa24.76■■□□□ 1.55
SNRNP70-204ENST00000595231 L1TD1Q5T7N2 865 aaKnown RBP24.76■■□□□ 1.55
SNRNP70-204ENST00000595231 PSRC1Q6PGN9 363 aaPredicted RBP24.76■■□□□ 1.55
SNRNP70-204ENST00000595231 ACO2Q99798 780 aaKnown RBP24.76■■□□□ 1.55
SNRNP70-204ENST00000595231 MRPL4Q9BYD3 311 aaKnown RBP24.76■■□□□ 1.55
SNRNP70-204ENST00000595231 TSPYL2Q9H2G4 693 aaPredicted RBP24.76■■□□□ 1.55
SNRNP70-204ENST00000595231 IKZF4Q9H2S9 585 aa24.76■■□□□ 1.55
SNRNP70-204ENST00000595231 RGS18Q9NS28 235 aa24.76■■□□□ 1.55
SNRNP70-204ENST00000595231 GDAQ9Y2T3 454 aa24.76■■□□□ 1.55
SNRNP70-204ENST00000595231 MICAL3Q7RTP6 2002 aa24.76■■□□□ 1.55
SNRNP70-204ENST00000595231 ABHD14A-ACY1A0A1B0GW23 586 aa24.75■■□□□ 1.55
SNRNP70-204ENST00000595231 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.75■■□□□ 1.55
SNRNP70-204ENST00000595231 EIF3DO15371 548 aaKnown RBP eCLIP24.75■■□□□ 1.55
SNRNP70-204ENST00000595231 NCBP1Q09161 790 aaKnown RBP24.75■■□□□ 1.55
SNRNP70-204ENST00000595231 CDR2LQ86X02 465 aaPredicted RBP24.75■■□□□ 1.55
SNRNP70-204ENST00000595231 PTPRHQ9HD43 1115 aa24.75■■□□□ 1.55
SNRNP70-204ENST00000595231 PIGRP01833 764 aa24.75■■□□□ 1.55
SNRNP70-204ENST00000595231 ZSCAN20P17040 1043 aaPredicted RBP24.75■■□□□ 1.55
SNRNP70-204ENST00000595231 BMP6P22004 513 aa24.75■■□□□ 1.55
SNRNP70-204ENST00000595231 UBXN11Q5T124 520 aa24.75■■□□□ 1.55
SNRNP70-204ENST00000595231 ISM2Q6H9L7 571 aa24.75■■□□□ 1.55
SNRNP70-204ENST00000595231 NOTUMQ6P988 496 aa24.75■■□□□ 1.55
SNRNP70-204ENST00000595231 ZPBP2Q6X784 338 aa24.75■■□□□ 1.55
SNRNP70-204ENST00000595231 RBM43Q6ZSC3 357 aaKnown RBP24.75■■□□□ 1.55
SNRNP70-204ENST00000595231 TRAIPQ9BWF2 469 aa24.75■■□□□ 1.55
SNRNP70-204ENST00000595231 PDZD7Q9H5P4 517 aa24.75■■□□□ 1.55
SNRNP70-204ENST00000595231 BAIAP3O94812 1187 aa24.74■■□□□ 1.55
SNRNP70-204ENST00000595231 ACTN1P12814 892 aa24.74■■□□□ 1.55
SNRNP70-204ENST00000595231 MORC3Q14149 939 aa24.74■■□□□ 1.55
SNRNP70-204ENST00000595231 BMT2Q1RMZ1 405 aa24.74■■□□□ 1.55
SNRNP70-204ENST00000595231 ZNF658Q5TYW1 1059 aaPredicted RBP24.74■■□□□ 1.55
SNRNP70-204ENST00000595231 ATF7IP2Q5U623 682 aa24.74■■□□□ 1.55
SNRNP70-204ENST00000595231 EEF1DP3Q658K8 133 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms