RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 HOXD13P35453 343 aa10.64□□□□□ -0.71
DDX39A-220ENST00000593008 NLRP11P59045 1033 aaKnown RBP10.64□□□□□ -0.71
DDX39A-220ENST00000593008 STK4Q13043 487 aa10.64□□□□□ -0.71
DDX39A-220ENST00000593008 ODR4Q5SWX8 454 aa10.64□□□□□ -0.71
DDX39A-220ENST00000593008 TSHZ1Q6ZSZ6 1077 aa10.64□□□□□ -0.71
DDX39A-220ENST00000593008 UNC13DQ70J99 1090 aa10.64□□□□□ -0.71
DDX39A-220ENST00000593008 RNF149Q8NC42 400 aa10.64□□□□□ -0.71
DDX39A-220ENST00000593008 NLRP7Q8WX94 980 aa10.64□□□□□ -0.71
DDX39A-220ENST00000593008 PSPC1Q8WXF1 523 aaKnown RBP10.64□□□□□ -0.71
DDX39A-220ENST00000593008 MAP7D2Q96T17 732 aa10.64□□□□□ -0.71
DDX39A-220ENST00000593008 PYM1Q9BRP8 204 aaKnown RBP10.64□□□□□ -0.71
DDX39A-220ENST00000593008 CELF4Q9BZC1 486 aaKnown RBP10.64□□□□□ -0.71
DDX39A-220ENST00000593008 PARVGQ9HBI0 331 aa10.64□□□□□ -0.71
DDX39A-220ENST00000593008 KAT6AQ92794 2004 aa10.63□□□□□ -0.71
DDX39A-220ENST00000593008 CCDC169A6NNP5 214 aa10.63□□□□□ -0.71
DDX39A-220ENST00000593008 RFXAPO00287 272 aa10.63□□□□□ -0.71
DDX39A-220ENST00000593008 PRPF6O94906 941 aaKnown RBP10.63□□□□□ -0.71
DDX39A-220ENST00000593008 SARSP49591 514 aaKnown RBP10.63□□□□□ -0.71
DDX39A-220ENST00000593008 TAP1Q03518 808 aa10.63□□□□□ -0.71
DDX39A-220ENST00000593008 MBTD1Q05BQ5 628 aa10.63□□□□□ -0.71
DDX39A-220ENST00000593008 DPCR1Q3MIW9 517 aa10.63□□□□□ -0.71
DDX39A-220ENST00000593008 HERC4Q5GLZ8 1057 aaPredicted RBP10.63□□□□□ -0.71
DDX39A-220ENST00000593008 FAM26FQ5R3K3 315 aa10.63□□□□□ -0.71
DDX39A-220ENST00000593008 CNNM4Q6P4Q7 775 aa10.63□□□□□ -0.71
DDX39A-220ENST00000593008 RBM43Q6ZSC3 357 aaKnown RBP10.63□□□□□ -0.71
DDX39A-220ENST00000593008 CDR2LQ86X02 465 aaPredicted RBP10.63□□□□□ -0.71
DDX39A-220ENST00000593008 NME8Q8N427 588 aa10.63□□□□□ -0.71
DDX39A-220ENST00000593008 SPATA20Q8TB22 786 aa10.63□□□□□ -0.71
DDX39A-220ENST00000593008 ARNTL2Q8WYA1 636 aa10.63□□□□□ -0.71
DDX39A-220ENST00000593008 KIFAP3Q92845 792 aa10.63□□□□□ -0.71
DDX39A-220ENST00000593008 APBB2Q92870 758 aa10.63□□□□□ -0.71
DDX39A-220ENST00000593008 SMARCE1Q969G3 411 aa10.63□□□□□ -0.71
DDX39A-220ENST00000593008 DRC1Q96MC2 740 aa10.63□□□□□ -0.71
DDX39A-220ENST00000593008 SCLT1Q96NL6 688 aa10.63□□□□□ -0.71
DDX39A-220ENST00000593008 RAD9AQ99638 391 aa10.63□□□□□ -0.71
DDX39A-220ENST00000593008 CCDC113Q9H0I3 377 aa10.63□□□□□ -0.71
DDX39A-220ENST00000593008 IFT122Q9HBG6 1241 aa10.63□□□□□ -0.71
DDX39A-220ENST00000593008 EXOC1Q9NV70 894 aa10.63□□□□□ -0.71
DDX39A-220ENST00000593008 MTUS1Q9ULD2 1270 aa10.63□□□□□ -0.71
DDX39A-220ENST00000593008 ODF2LQ9ULJ1 636 aa10.63□□□□□ -0.71
DDX39A-220ENST00000593008 NOC2LQ9Y3T9 749 aaKnown RBP10.63□□□□□ -0.71
DDX39A-220ENST00000593008 EPOPA6NHQ4 379 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 ENPP3O14638 875 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 PPP1R37O75864 691 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 RPLP2P05387 115 aaKnown RBP10.62□□□□□ -0.71
DDX39A-220ENST00000593008 MAPTP10636 758 aaKnown RBP10.62□□□□□ -0.71
DDX39A-220ENST00000593008 IGFBP4P22692 258 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 NCKAP1LP55160 1127 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 NFX1Q12986 1120 aaKnown RBP10.62□□□□□ -0.71
DDX39A-220ENST00000593008 PAK2Q13177 524 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 DMP1Q13316 513 aaPredicted RBP10.62□□□□□ -0.71
DDX39A-220ENST00000593008 MORC3Q14149 939 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 ADGRE1Q14246 886 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 AMHR2Q16671 573 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 ZSCAN23Q3MJ62 389 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 CDCA2Q69YH5 1023 aaPredicted RBP10.62□□□□□ -0.71
DDX39A-220ENST00000593008 C11orf57Q6ZUT1 292 aaPredicted RBP10.62□□□□□ -0.71
DDX39A-220ENST00000593008 FAM228AQ86W67 206 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 NELFCDQ8IXH7 590 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 CCDC65Q8IXS2 484 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 KCTD17Q8N5Z5 321 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 TMEM161BQ8NDZ6 487 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 MAFAQ8NHW3 353 aaPredicted RBP10.62□□□□□ -0.71
DDX39A-220ENST00000593008 DEPTORQ8TB45 409 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 SCFD1Q8WVM8 642 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 LINC01599Q8WXQ3 324 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 PPM1EQ8WY54 764 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 MRPL44Q9H9J2 332 aaKnown RBP10.62□□□□□ -0.71
DDX39A-220ENST00000593008 KMT5AQ9NQR1 393 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 KCND2Q9NZV8 630 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 KIAA1468Q9P260 1216 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 PADI3Q9ULW8 664 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 PPME1Q9Y570 386 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 MYH11P35749 1972 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 PRUNE2Q8WUY3 3088 aa10.62□□□□□ -0.71
DDX39A-220ENST00000593008 A0A0C4DFX4 3053 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 DENND3A2RUS2 1198 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 INO80B-WBP1J3KQ70 363 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 RHOBTB3O94955 611 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 GCNT3O95395 438 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 DARSP14868 501 aaKnown RBP10.61□□□□□ -0.71
DDX39A-220ENST00000593008 GAP43P17677 238 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 TMOD1P28289 359 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 NAMPTP43490 491 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 PMS1P54277 932 aaKnown RBP10.61□□□□□ -0.71
DDX39A-220ENST00000593008 PTENP60484 403 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 AMPD3Q01432 767 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 CCDC85BQ15834 202 aaPredicted RBP10.61□□□□□ -0.71
DDX39A-220ENST00000593008 NT5DC1Q5TFE4 455 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 EEF1DP3Q658K8 133 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 KANK3Q6NY19 840 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 SLC39A4Q6P5W5 647 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 EPM2AIP1Q7L775 607 aaPredicted RBP10.61□□□□□ -0.71
DDX39A-220ENST00000593008 HAUS6Q7Z4H7 955 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 RTN4RL1Q86UN2 441 aaPredicted RBP10.61□□□□□ -0.71
DDX39A-220ENST00000593008 FAM178BQ8IXR5 827 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 SLC17A8Q8NDX2 589 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 ZSWIM2Q8NEG5 633 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 TCP11Q8WWU5 503 aa10.61□□□□□ -0.71
DDX39A-220ENST00000593008 TOP1MTQ969P6 601 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms