RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 MICALL1Q8N3F8 863 aa12.74□□□□□ -0.37
VMP1-211ENST00000591315 SMG8Q8ND04 991 aaKnown RBP12.74□□□□□ -0.37
VMP1-211ENST00000591315 FBXO22Q8NEZ5 403 aa12.74□□□□□ -0.37
VMP1-211ENST00000591315 DEPTORQ8TB45 409 aa12.74□□□□□ -0.37
VMP1-211ENST00000591315 CCDC113Q9H0I3 377 aa12.74□□□□□ -0.37
VMP1-211ENST00000591315 NT5C3AQ9H0P0 336 aa12.74□□□□□ -0.37
VMP1-211ENST00000591315 FZD8Q9H461 694 aa12.74□□□□□ -0.37
VMP1-211ENST00000591315 ELAC1Q9H777 363 aaKnown RBP12.74□□□□□ -0.37
VMP1-211ENST00000591315 CHST12Q9NRB3 414 aa12.74□□□□□ -0.37
VMP1-211ENST00000591315 TYW1Q9NV66 732 aaKnown RBP12.74□□□□□ -0.37
VMP1-211ENST00000591315 HES2Q9Y543 173 aa12.74□□□□□ -0.37
VMP1-211ENST00000591315 ATG2AQ2TAZ0 1938 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 CCDC169A6NNP5 214 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 SLC16A4O15374 487 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 B4GALT3O60512 393 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 ERLIN2O94905 339 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 CSPG5O95196 566 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 YEATS4O95619 227 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 GUCY2CP25092 1073 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 PBX3P40426 434 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 NAMPTP43490 491 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 NT5DC1Q5TFE4 455 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 SHC4Q6S5L8 630 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 AGMOQ6ZNB7 445 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 PDILTQ8N807 584 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 MAFAQ8NHW3 353 aaPredicted RBP12.73□□□□□ -0.37
VMP1-211ENST00000591315 KIFAP3Q92845 792 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 CLP1Q92989 425 aaKnown RBP12.73□□□□□ -0.37
VMP1-211ENST00000591315 IFT74Q96LB3 600 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 GAS2L1Q99501 681 aaPredicted RBP12.73□□□□□ -0.37
VMP1-211ENST00000591315 REEP2Q9BRK0 252 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 APOL6Q9BWW8 343 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 NFKBIZQ9BYH8 718 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 CXCL16Q9H2A7 254 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 CWH43Q9H720 699 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 PRDM6Q9NQX0 595 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 DACT1Q9NYF0 836 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 MTCH2Q9Y6C9 303 aa12.73□□□□□ -0.37
VMP1-211ENST00000591315 MORC2Q9Y6X9 1032 aaPredicted RBP12.73□□□□□ -0.37
VMP1-211ENST00000591315 RALGAPA2Q2PPJ7 1873 aa12.72□□□□□ -0.37
VMP1-211ENST00000591315 GRM6O15303 877 aa12.72□□□□□ -0.37
VMP1-211ENST00000591315 SLC26A4O43511 780 aa12.72□□□□□ -0.37
VMP1-211ENST00000591315 ZNF623O75123 536 aa12.72□□□□□ -0.37
VMP1-211ENST00000591315 PPP6R2O75170 966 aa12.72□□□□□ -0.37
VMP1-211ENST00000591315 NPTXRO95502 500 aa12.72□□□□□ -0.37
VMP1-211ENST00000591315 PRKCBP05771 671 aa12.72□□□□□ -0.37
VMP1-211ENST00000591315 DDIT3P35638 169 aa12.72□□□□□ -0.37
VMP1-211ENST00000591315 BMPR1AP36894 532 aa12.72□□□□□ -0.37
VMP1-211ENST00000591315 GPM6BQ13491 265 aa12.72□□□□□ -0.37
VMP1-211ENST00000591315 RRAGBQ5VZM2 374 aa12.72□□□□□ -0.37
VMP1-211ENST00000591315 MRPL10Q7Z7H8 261 aaKnown RBP12.72□□□□□ -0.37
VMP1-211ENST00000591315 ZBTB8OSQ8IWT0 167 aa12.72□□□□□ -0.37
VMP1-211ENST00000591315 STAMQ92783 540 aa12.72□□□□□ -0.37
VMP1-211ENST00000591315 TRAIPQ9BWF2 469 aa12.72□□□□□ -0.37
VMP1-211ENST00000591315 TMEM117Q9H0C3 514 aa12.72□□□□□ -0.37
VMP1-211ENST00000591315 NXF3Q9H4D5 531 aaKnown RBP12.72□□□□□ -0.37
VMP1-211ENST00000591315 ALG13Q9NP73 1137 aaKnown RBP12.72□□□□□ -0.37
VMP1-211ENST00000591315 RCOR1Q9UKL0 485 aa12.72□□□□□ -0.37
VMP1-211ENST00000591315 PCDHA7Q9UN72 937 aa12.72□□□□□ -0.37
VMP1-211ENST00000591315 INPP5FQ9Y2H2 1132 aa12.72□□□□□ -0.37
VMP1-211ENST00000591315 TRIP11Q15643 1979 aa12.71□□□□□ -0.37
VMP1-211ENST00000591315 A0A1B0GUA9 196 aa12.71□□□□□ -0.37
VMP1-211ENST00000591315 MYMKA6NI61 221 aa12.71□□□□□ -0.37
VMP1-211ENST00000591315 OFD1O75665 1012 aa12.71□□□□□ -0.37
VMP1-211ENST00000591315 EOMESO95936 686 aa12.71□□□□□ -0.37
VMP1-211ENST00000591315 NCLP19338 710 aaKnown RBP12.71□□□□□ -0.37
VMP1-211ENST00000591315 AKAP5P24588 427 aa12.71□□□□□ -0.37
VMP1-211ENST00000591315 DNAJB1P25685 340 aa12.71□□□□□ -0.37
VMP1-211ENST00000591315 GIT2Q14161 759 aa12.71□□□□□ -0.37
VMP1-211ENST00000591315 PPP2R5AQ15172 486 aa12.71□□□□□ -0.37
VMP1-211ENST00000591315 FAM187BQ17R55 369 aa12.71□□□□□ -0.37
VMP1-211ENST00000591315 TPRNQ4KMQ1 711 aa12.71□□□□□ -0.37
VMP1-211ENST00000591315 SPOUT1Q5T280 376 aaKnown RBP12.71□□□□□ -0.37
VMP1-211ENST00000591315 NOTUMQ6P988 496 aa12.71□□□□□ -0.37
VMP1-211ENST00000591315 DYMQ7RTS9 669 aa12.71□□□□□ -0.37
VMP1-211ENST00000591315 KLHL23Q8NBE8 558 aa12.71□□□□□ -0.37
VMP1-211ENST00000591315 LARP4BQ92615 738 aaKnown RBP12.71□□□□□ -0.37
VMP1-211ENST00000591315 DRC1Q96MC2 740 aa12.71□□□□□ -0.37
VMP1-211ENST00000591315 C2orf40Q9H1Z8 148 aa12.71□□□□□ -0.37
VMP1-211ENST00000591315 PDZD7Q9H5P4 517 aa12.71□□□□□ -0.37
VMP1-211ENST00000591315 KMT5AQ9NQR1 393 aa12.71□□□□□ -0.37
VMP1-211ENST00000591315 PRMT7Q9NVM4 692 aaPredicted RBP12.71□□□□□ -0.37
VMP1-211ENST00000591315 MIOSQ9NXC5 875 aa12.71□□□□□ -0.37
VMP1-211ENST00000591315 ARHGAP28Q9P2N2 729 aa12.71□□□□□ -0.37
VMP1-211ENST00000591315 IPPQ9Y573 584 aa12.71□□□□□ -0.37
VMP1-211ENST00000591315 PCDHGC5Q9Y5F6 944 aa12.71□□□□□ -0.37
VMP1-211ENST00000591315 PLXNA4Q9HCM2 1894 aa12.71□□□□□ -0.37
VMP1-211ENST00000591315 CNTNAP2Q9UHC6 1331 aa12.7□□□□□ -0.38
VMP1-211ENST00000591315 H3BNC9 293 aa12.7□□□□□ -0.38
VMP1-211ENST00000591315 ACKR2O00590 384 aa12.7□□□□□ -0.38
VMP1-211ENST00000591315 CUTAO60888 179 aa12.7□□□□□ -0.38
VMP1-211ENST00000591315 ITGB1P05556 798 aa12.7□□□□□ -0.38
VMP1-211ENST00000591315 PDIA4P13667 645 aaKnown RBP12.7□□□□□ -0.38
VMP1-211ENST00000591315 PLS3P13797 630 aa12.7□□□□□ -0.38
VMP1-211ENST00000591315 ME1P48163 572 aa12.7□□□□□ -0.38
VMP1-211ENST00000591315 DMP1Q13316 513 aaPredicted RBP12.7□□□□□ -0.38
VMP1-211ENST00000591315 PRPF4BQ13523 1007 aaKnown RBP12.7□□□□□ -0.38
VMP1-211ENST00000591315 CAMK1Q14012 370 aa12.7□□□□□ -0.38
VMP1-211ENST00000591315 MAPK6Q16659 721 aa12.7□□□□□ -0.38
VMP1-211ENST00000591315 ABI1Q8IZP0 508 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms