RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 TCP11Q8WWU5 503 aa18.31■□□□□ 0.52
GCDH-213ENST00000590627 PARVGQ9HBI0 331 aa18.31■□□□□ 0.52
GCDH-213ENST00000590627 SEL1LQ9UBV2 794 aa18.31■□□□□ 0.52
GCDH-213ENST00000590627 PCDHA2Q9Y5H9 948 aa18.31■□□□□ 0.52
GCDH-213ENST00000590627 COL4A6Q14031 1691 aa18.31■□□□□ 0.52
GCDH-213ENST00000590627 FAM13AO94988 1023 aa18.3■□□□□ 0.52
GCDH-213ENST00000590627 IGBP1P78318 339 aa18.3■□□□□ 0.52
GCDH-213ENST00000590627 CACNB1Q02641 598 aaPredicted RBP18.3■□□□□ 0.52
GCDH-213ENST00000590627 COASYQ13057 564 aa18.3■□□□□ 0.52
GCDH-213ENST00000590627 PSMD2Q13200 908 aa18.3■□□□□ 0.52
GCDH-213ENST00000590627 MORC3Q14149 939 aa18.3■□□□□ 0.52
GCDH-213ENST00000590627 FAM26DQ5JW98 314 aa18.3■□□□□ 0.52
GCDH-213ENST00000590627 FAM102BQ5T8I3 360 aa18.3■□□□□ 0.52
GCDH-213ENST00000590627 FBXO22Q8NEZ5 403 aa18.3■□□□□ 0.52
GCDH-213ENST00000590627 APBB2Q92870 758 aa18.3■□□□□ 0.52
GCDH-213ENST00000590627 TOP1MTQ969P6 601 aa18.3■□□□□ 0.52
GCDH-213ENST00000590627 C17orf80Q9BSJ5 609 aa18.3■□□□□ 0.52
GCDH-213ENST00000590627 EXOC1Q9NV70 894 aa18.3■□□□□ 0.52
GCDH-213ENST00000590627 KAT6AQ92794 2004 aa18.29■□□□□ 0.52
GCDH-213ENST00000590627 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.29■□□□□ 0.52
GCDH-213ENST00000590627 SYCE3A1L190 88 aa18.29■□□□□ 0.52
GCDH-213ENST00000590627 PLS3P13797 630 aa18.29■□□□□ 0.52
GCDH-213ENST00000590627 DNM2P50570 870 aa18.29■□□□□ 0.52
GCDH-213ENST00000590627 HERC4Q5GLZ8 1057 aaPredicted RBP18.29■□□□□ 0.52
GCDH-213ENST00000590627 EFCAB12Q6NXP0 572 aa18.29■□□□□ 0.52
GCDH-213ENST00000590627 SASS6Q6UVJ0 657 aa18.29■□□□□ 0.52
GCDH-213ENST00000590627 MAEAQ7L5Y9 396 aa18.29■□□□□ 0.52
GCDH-213ENST00000590627 TMEM143Q96AN5 459 aa18.29■□□□□ 0.52
GCDH-213ENST00000590627 NTPCRQ9BSD7 190 aaKnown RBP18.29■□□□□ 0.52
GCDH-213ENST00000590627 FUCA2Q9BTY2 467 aa18.29■□□□□ 0.52
GCDH-213ENST00000590627 POLR3FQ9H1D9 316 aaPredicted RBP18.29■□□□□ 0.52
GCDH-213ENST00000590627 UBE2ZQ9H832 354 aaPredicted RBP18.29■□□□□ 0.52
GCDH-213ENST00000590627 GPRC5CQ9NQ84 441 aa18.29■□□□□ 0.52
GCDH-213ENST00000590627 OLFML3Q9NRN5 406 aa18.29■□□□□ 0.52
GCDH-213ENST00000590627 LARSQ9P2J5 1176 aaKnown RBP18.29■□□□□ 0.52
GCDH-213ENST00000590627 KCNG1Q9UIX4 513 aa18.29■□□□□ 0.52
GCDH-213ENST00000590627 CTSHP09668 335 aa18.28■□□□□ 0.52
GCDH-213ENST00000590627 MAPTP10636 758 aaKnown RBP18.28■□□□□ 0.52
GCDH-213ENST00000590627 BMP6P22004 513 aa18.28■□□□□ 0.52
GCDH-213ENST00000590627 TMOD1P28289 359 aa18.28■□□□□ 0.52
GCDH-213ENST00000590627 ZNF445P59923 1031 aa18.28■□□□□ 0.52
GCDH-213ENST00000590627 ZNF658Q5TYW1 1059 aaPredicted RBP18.28■□□□□ 0.52
GCDH-213ENST00000590627 RPAINQ86UA6 219 aa18.28■□□□□ 0.52
GCDH-213ENST00000590627 SFR1Q86XK3 245 aa18.28■□□□□ 0.52
GCDH-213ENST00000590627 MYCT1Q8N699 235 aa18.28■□□□□ 0.52
GCDH-213ENST00000590627 SPIRE2Q8WWL2 714 aa18.28■□□□□ 0.52
GCDH-213ENST00000590627 PSPC1Q8WXF1 523 aaKnown RBP18.28■□□□□ 0.52
GCDH-213ENST00000590627 KCNN1Q92952 543 aa18.28■□□□□ 0.52
GCDH-213ENST00000590627 MRPL38Q96DV4 380 aaKnown RBP18.28■□□□□ 0.52
GCDH-213ENST00000590627 GZF1Q9H116 711 aaPredicted RBP18.28■□□□□ 0.52
GCDH-213ENST00000590627 SMIM35A0A1B0GVV1 85 aa18.27■□□□□ 0.52
GCDH-213ENST00000590627 SFI1A8K8P3 1242 aa18.27■□□□□ 0.52
GCDH-213ENST00000590627 BIN1O00499 593 aa18.27■□□□□ 0.52
GCDH-213ENST00000590627 ASAP2O43150 1006 aa18.27■□□□□ 0.52
GCDH-213ENST00000590627 CCDC192P0DO97 292 aa18.27■□□□□ 0.52
GCDH-213ENST00000590627 NLRP12P59046 1061 aa18.27■□□□□ 0.52
GCDH-213ENST00000590627 DRP2Q13474 957 aa18.27■□□□□ 0.52
GCDH-213ENST00000590627 MXD4Q14582 209 aaPredicted RBP18.27■□□□□ 0.52
GCDH-213ENST00000590627 PTPROQ16827 1216 aa18.27■□□□□ 0.52
GCDH-213ENST00000590627 EPC2Q52LR7 807 aa18.27■□□□□ 0.52
GCDH-213ENST00000590627 COBLL1Q53SF7 1204 aa18.27■□□□□ 0.52
GCDH-213ENST00000590627 FAM26FQ5R3K3 315 aa18.27■□□□□ 0.52
GCDH-213ENST00000590627 ODR4Q5SWX8 454 aa18.27■□□□□ 0.52
GCDH-213ENST00000590627 TAF2Q6P1X5 1199 aa18.27■□□□□ 0.52
GCDH-213ENST00000590627 KIAA0319LQ8IZA0 1049 aa18.27■□□□□ 0.52
GCDH-213ENST00000590627 LRRC71Q8N4P6 559 aa18.27■□□□□ 0.52
GCDH-213ENST00000590627 METTL13Q8N6R0 699 aa18.27■□□□□ 0.52
GCDH-213ENST00000590627 ASAP3Q8TDY4 903 aa18.27■□□□□ 0.52
GCDH-213ENST00000590627 FIZ1Q96SL8 496 aa18.27■□□□□ 0.52
GCDH-213ENST00000590627 YME1L1Q96TA2 773 aa18.27■□□□□ 0.52
GCDH-213ENST00000590627 ZHX3Q9H4I2 956 aa18.27■□□□□ 0.52
GCDH-213ENST00000590627 POLD4Q9HCU8 107 aa18.27■□□□□ 0.52
GCDH-213ENST00000590627 SUCLA2Q9P2R7 463 aaPredicted RBP18.27■□□□□ 0.52
GCDH-213ENST00000590627 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.26■□□□□ 0.51
GCDH-213ENST00000590627 SCP2P22307 547 aa18.26■□□□□ 0.51
GCDH-213ENST00000590627 GLRA2P23416 452 aa18.26■□□□□ 0.51
GCDH-213ENST00000590627 CLCN3P51790 818 aa18.26■□□□□ 0.51
GCDH-213ENST00000590627 TYRO3Q06418 890 aa18.26■□□□□ 0.51
GCDH-213ENST00000590627 STK4Q13043 487 aa18.26■□□□□ 0.51
GCDH-213ENST00000590627 PPP2R5AQ15172 486 aa18.26■□□□□ 0.51
GCDH-213ENST00000590627 LEXMQ3ZCV2 418 aa18.26■□□□□ 0.51
GCDH-213ENST00000590627 ZNF710Q8N1W2 664 aa18.26■□□□□ 0.51
GCDH-213ENST00000590627 MLKLQ8NB16 471 aa18.26■□□□□ 0.51
GCDH-213ENST00000590627 PRPF31Q8WWY3 499 aaKnown RBP18.26■□□□□ 0.51
GCDH-213ENST00000590627 BSNDQ8WZ55 320 aa18.26■□□□□ 0.51
GCDH-213ENST00000590627 ZBTB10Q96DT7 871 aa18.26■□□□□ 0.51
GCDH-213ENST00000590627 IFT74Q96LB3 600 aa18.26■□□□□ 0.51
GCDH-213ENST00000590627 IFIH1Q9BYX4 1025 aaKnown RBP18.26■□□□□ 0.51
GCDH-213ENST00000590627 OSBPL7Q9BZF2 842 aa18.26■□□□□ 0.51
GCDH-213ENST00000590627 ST6GALNAC4Q9H4F1 302 aa18.26■□□□□ 0.51
GCDH-213ENST00000590627 ANO10Q9NW15 660 aa18.26■□□□□ 0.51
GCDH-213ENST00000590627 RAPGEFL1Q9UHV5 662 aa18.26■□□□□ 0.51
GCDH-213ENST00000590627 RALGAPA2Q2PPJ7 1873 aa18.25■□□□□ 0.51
GCDH-213ENST00000590627 NLRC5Q86WI3 1866 aa18.25■□□□□ 0.51
GCDH-213ENST00000590627 H3BNC9 293 aa18.25■□□□□ 0.51
GCDH-213ENST00000590627 UPP2O95045 317 aa18.25■□□□□ 0.51
GCDH-213ENST00000590627 RPLP2P05387 115 aaKnown RBP18.25■□□□□ 0.51
GCDH-213ENST00000590627 NAMPTP43490 491 aa18.25■□□□□ 0.51
GCDH-213ENST00000590627 NPTX2P47972 431 aa18.25■□□□□ 0.51
GCDH-213ENST00000590627 CDC42EP1Q00587 391 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms