RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 CYP2C9P11712 490 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 CYP2C18P33260 490 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 NPTX2P47972 431 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 CYP2J2P51589 502 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 ADKP55263 362 aaKnown RBP11.16□□□□□ -0.62
APOC1-205ENST00000589781 ADAM9Q13443 819 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 ALCAMQ13740 583 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 GPNMBQ14956 572 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 PLCB4Q15147 1175 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 TARBP2Q15633 366 aaKnown RBP11.16□□□□□ -0.62
APOC1-205ENST00000589781 VWA3BQ502W6 1294 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 FKBP15Q5T1M5 1219 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 HAUS6Q7Z4H7 955 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 PPFIBP1Q86W92 1011 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 SYCP3Q8IZU3 236 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 TC2NQ8N9U0 490 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 ASAP3Q8TDY4 903 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 TMEM143Q96AN5 459 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 FAM167AQ96KS9 214 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 ACCSQ96QU6 501 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 C16orf70Q9BSU1 422 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 MTG1Q9BT17 334 aaPredicted RBP11.16□□□□□ -0.62
APOC1-205ENST00000589781 NIFKQ9BYG3 293 aaKnown RBP11.16□□□□□ -0.62
APOC1-205ENST00000589781 PPP1R12CQ9BZL4 782 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 GBP3Q9H0R5 595 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 DHX33Q9H6R0 707 aaKnown RBP11.16□□□□□ -0.62
APOC1-205ENST00000589781 KMT5AQ9NQR1 393 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 AGPAT3Q9NRZ7 376 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 PCDHB13Q9Y5F0 798 aa11.16□□□□□ -0.62
APOC1-205ENST00000589781 A0A1W2PQC6 194 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 AKR1B15C9JRZ8 316 aaPredicted RBP11.15□□□□□ -0.62
APOC1-205ENST00000589781 SLC16A3O15427 465 aaKnown RBP11.15□□□□□ -0.62
APOC1-205ENST00000589781 MFAP3LO75121 409 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 AKAP3O75969 853 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 LGALS2P05162 132 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 EPB41P11171 864 aaKnown RBP11.15□□□□□ -0.62
APOC1-205ENST00000589781 CSF2RAP15509 400 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 RAG1P15918 1043 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 RFC5P40937 340 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 CASP4P49662 377 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 CPT1AP50416 773 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 DNM2P50570 870 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 MARSP56192 900 aaKnown RBP11.15□□□□□ -0.62
APOC1-205ENST00000589781 RBL2Q08999 1139 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 LAMC2Q13753 1193 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 TRIM14Q14142 442 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 SYCP1Q15431 976 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 FAM109BQ6ICB4 259 aaPredicted RBP11.15□□□□□ -0.62
APOC1-205ENST00000589781 MFSD5Q6N075 450 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 HS2ST1Q7LGA3 356 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 TRIM59Q8IWR1 403 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 TMEM161BQ8NDZ6 487 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 ATP8B4Q8TF62 1192 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 CPLX3Q8WVH0 158 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 TRAPPC12Q8WVT3 735 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 BBXQ8WY36 941 aaPredicted RBP11.15□□□□□ -0.62
APOC1-205ENST00000589781 DHX38Q92620 1227 aaKnown RBP11.15□□□□□ -0.62
APOC1-205ENST00000589781 WNT8BQ93098 351 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 NDST4Q9H3R1 872 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 NRBP2Q9NSY0 501 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 TRPC6Q9Y210 931 aa11.15□□□□□ -0.62
APOC1-205ENST00000589781 DENND3A2RUS2 1198 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 ZBTB42B2RXF5 422 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 GNA14O95837 355 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 SKILP12757 684 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 GLRA2P23416 452 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 CASP14P31944 242 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 ZNF200P98182 395 aaPredicted RBP11.14□□□□□ -0.63
APOC1-205ENST00000589781 GTF2BQ00403 316 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 TBC1D8BQ0IIM8 1120 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 NFIL3Q16649 462 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 DCAF17Q5H9S7 520 aaPredicted RBP11.14□□□□□ -0.63
APOC1-205ENST00000589781 TMEM240Q5SV17 173 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 RASIP1Q5U651 963 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 GDF6Q6KF10 455 aaPredicted RBP11.14□□□□□ -0.63
APOC1-205ENST00000589781 Q7L0L9 218 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 TAS1R3Q7RTX0 852 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 PLPPR4Q7Z2D5 763 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 TMEM139Q8IV31 216 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 MAP4K3Q8IVH8 894 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 CCDC155Q8N6L0 562 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 PPTC7Q8NI37 304 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 KIAA1524Q8TCG1 905 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 SPIRE2Q8WWL2 714 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 SLC7A3Q8WY07 619 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 HVCN1Q96D96 273 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 ZBTB10Q96DT7 871 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 IFT74Q96LB3 600 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 PCMTD1Q96MG8 357 aaPredicted RBP11.14□□□□□ -0.63
APOC1-205ENST00000589781 LBHD1Q9BQE6 289 aaPredicted RBP11.14□□□□□ -0.63
APOC1-205ENST00000589781 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.14□□□□□ -0.636e-7■■■■□ 21.5
APOC1-205ENST00000589781 ST6GALNAC4Q9H4F1 302 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 SMARCAD1Q9H4L7 1026 aa11.14□□□□□ -0.63
APOC1-205ENST00000589781 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.14□□□□□ -0.635e-9■□□□□ 8.6
APOC1-205ENST00000589781 KAT6AQ92794 2004 aa11.13□□□□□ -0.63
APOC1-205ENST00000589781 LRRIQ4A6NIV6 560 aa11.13□□□□□ -0.63
APOC1-205ENST00000589781 ZNF500O60304 480 aaPredicted RBP11.13□□□□□ -0.63
APOC1-205ENST00000589781 ZEB2O60315 1214 aa11.13□□□□□ -0.63
APOC1-205ENST00000589781 MAFO75444 373 aaPredicted RBP11.13□□□□□ -0.63
APOC1-205ENST00000589781 F2P00734 622 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms