RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 GGCXP38435 758 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 CAP2P40123 477 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 GYS2P54840 703 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 HNRNPH2P55795 449 aaKnown RBP8.04□□□□□ -1.12
ZNF540-206ENST00000589117 SNRPFP62306 86 aaKnown RBP8.04□□□□□ -1.12
ZNF540-206ENST00000589117 PPP2R5EQ16537 467 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 ZNF571Q7Z3V5 609 aaPredicted RBP8.04□□□□□ -1.12
ZNF540-206ENST00000589117 PEX26Q7Z412 305 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 SLC9A9Q8IVB4 645 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 AGBL3Q8NEM8 1001 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 ACER1Q8TDN7 264 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 WHAMMQ8TF30 809 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 LPAR1Q92633 364 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 NAP1L3Q99457 506 aaPredicted RBP8.04□□□□□ -1.12
ZNF540-206ENST00000589117 MXRA8Q9BRK3 442 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 WDR18Q9BV38 432 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 GOLGA6AQ9NYA3 693 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 DIS3Q9Y2L1 958 aaKnown RBP8.04□□□□□ -1.12
ZNF540-206ENST00000589117 FRMPD4Q14CM0 1322 aa8.04□□□□□ -1.12
ZNF540-206ENST00000589117 ARFGEF1Q9Y6D6 1849 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 TMCO5BA8MYB1 307 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 CCDC188H7C350 402 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 KCNK3O14649 394 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 TGFB1I1O43294 461 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 RPS6KA5O75582 802 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 ICAM1P05362 532 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 SOX5P35711 763 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 FMO5P49326 533 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 INTS8Q75QN2 995 aaKnown RBP8.03□□□□□ -1.12
ZNF540-206ENST00000589117 MIER3Q7Z3K6 550 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 MAATS1Q7Z4T9 603 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 CTNNBL1Q8WYA6 563 aaPredicted RBP8.03□□□□□ -1.12
ZNF540-206ENST00000589117 LXNQ9BS40 222 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 TSPYL1Q9H0U9 437 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 RBM12Q9NTZ6 932 aaKnown RBP8.03□□□□□ -1.12
ZNF540-206ENST00000589117 TBC1D22BQ9NU19 505 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 GINM1Q9NU53 330 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 DMGDHQ9UI17 866 aaKnown RBP8.03□□□□□ -1.12
ZNF540-206ENST00000589117 CCPG1Q9ULG6 757 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 COL11A2P13942 1736 aaPredicted RBP8.03□□□□□ -1.12
ZNF540-206ENST00000589117 YDJCA8MPS7 323 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 P4HA2O15460 535 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 RAD17O75943 681 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 HEXIM1O94992 359 aaKnown RBP8.03□□□□□ -1.12
ZNF540-206ENST00000589117 KIF4AO95239 1232 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 SYF2O95926 243 aaKnown RBP8.03□□□□□ -1.12
ZNF540-206ENST00000589117 WEE1P30291 646 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 NMT1P30419 496 aaKnown RBP8.03□□□□□ -1.12
ZNF540-206ENST00000589117 CASP4P49662 377 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 JAM2P57087 298 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 JAG1P78504 1218 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 SLC7A5Q01650 507 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 CUL1Q13616 776 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 TNFAIP1Q13829 316 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 USP38Q8NB14 1042 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 CCDC26Q8TAB7 109 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 ACTRT1Q8TDG2 376 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 UNC45AQ9H3U1 944 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 EPB41L5Q9HCM4 733 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 AGPAT3Q9NRZ7 376 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 SUCLA2Q9P2R7 463 aaPredicted RBP8.03□□□□□ -1.12
ZNF540-206ENST00000589117 AMFRQ9UKV5 643 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 SAMM50Q9Y512 469 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 ADAMTSL1Q8N6G6 1762 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 BRWD3Q6RI45 1802 aa8.03□□□□□ -1.12
ZNF540-206ENST00000589117 PGRMC1O00264 195 aaKnown RBP8.02□□□□□ -1.13
ZNF540-206ENST00000589117 TNFAIP3P21580 790 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 DNA2P51530 1060 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 CYP2J2P51589 502 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 HSD17B4P51659 736 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 COPS2P61201 443 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 GUCY2DQ02846 1103 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 RRP1BQ14684 758 aaKnown RBP8.02□□□□□ -1.13
ZNF540-206ENST00000589117 ZYXQ15942 572 aaKnown RBP8.02□□□□□ -1.13
ZNF540-206ENST00000589117 CFAP58Q5T655 872 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 DAAM2Q86T65 1068 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 USP37Q86T82 979 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 CCDC125Q86Z20 511 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 NIM1KQ8IY84 436 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 TMEM174Q8WUU8 243 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 IFT81Q8WYA0 676 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 FOXJ1Q92949 421 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 BORCS6Q96GS4 357 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 MS4A14Q96JA4 679 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 GDAP1L1Q96MZ0 367 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 ACCSQ96QU6 501 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 GDF3Q9NR23 364 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 DMAC2Q9NW81 257 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 APEX2Q9UBZ4 518 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 DBR1Q9UK59 544 aaKnown RBP8.02□□□□□ -1.13
ZNF540-206ENST00000589117 ZNRF3Q9ULT6 936 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 SIPA1L1O43166 1804 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 EP400Q96L91 3159 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 ATAD5Q96QE3 1844 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 GOLGA6L10A6NI86 522 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 WDR46O15213 610 aaKnown RBP8.02□□□□□ -1.13
ZNF540-206ENST00000589117 CEP104O60308 925 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 ARP10275 920 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 RXRBP28702 533 aa8.02□□□□□ -1.13
ZNF540-206ENST00000589117 QARSP47897 775 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms