RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 PBKQ96KB5 322 aa16.56■□□□□ 0.24
MBD1-217ENST00000588937 PSMB7Q99436 277 aa16.56■□□□□ 0.24
MBD1-217ENST00000588937 PDLIM7Q9NR12 457 aa16.56■□□□□ 0.24
MBD1-217ENST00000588937 CYP26B1Q9NR63 512 aa16.56■□□□□ 0.24
MBD1-217ENST00000588937 IGSF9BQ9UPX0 1349 aa16.55■□□□□ 0.24
MBD1-217ENST00000588937 IREB2P48200 963 aaKnown RBP16.55■□□□□ 0.24
MBD1-217ENST00000588937 GCLMP48507 274 aa16.55■□□□□ 0.24
MBD1-217ENST00000588937 PPP3CAQ08209 521 aa16.55■□□□□ 0.24
MBD1-217ENST00000588937 CASP8Q14790 479 aa16.55■□□□□ 0.24
MBD1-217ENST00000588937 SNRNP35Q16560 246 aaKnown RBP16.55■□□□□ 0.24
MBD1-217ENST00000588937 ARHGAP44Q17R89 818 aa16.55■□□□□ 0.24
MBD1-217ENST00000588937 CCDC60Q8IWA6 550 aaPredicted RBP16.55■□□□□ 0.24
MBD1-217ENST00000588937 TPCN2Q8NHX9 752 aa16.55■□□□□ 0.24
MBD1-217ENST00000588937 LNX1Q8TBB1 728 aaPredicted RBP16.55■□□□□ 0.24
MBD1-217ENST00000588937 CALR3Q96L12 384 aaKnown RBP16.55■□□□□ 0.24
MBD1-217ENST00000588937 VIPAS39Q9H9C1 493 aa16.55■□□□□ 0.24
MBD1-217ENST00000588937 UBE2TQ9NPD8 197 aaPredicted RBP16.55■□□□□ 0.24
MBD1-217ENST00000588937 A0A0G2JMZ2 1700 aa16.55■□□□□ 0.24
MBD1-217ENST00000588937 PTPRFP10586 1907 aa16.55■□□□□ 0.24
MBD1-217ENST00000588937 TMEM253P0C7T8 217 aa16.54■□□□□ 0.24
MBD1-217ENST00000588937 GARTP22102 1010 aa16.54■□□□□ 0.24
MBD1-217ENST00000588937 GTF2H1P32780 548 aa16.54■□□□□ 0.24
MBD1-217ENST00000588937 BRDTQ58F21 947 aaPredicted RBP16.54■□□□□ 0.24
MBD1-217ENST00000588937 PROCA1Q8NCQ7 364 aaPredicted RBP16.54■□□□□ 0.24
MBD1-217ENST00000588937 TMC2Q8TDI7 906 aa16.54■□□□□ 0.24
MBD1-217ENST00000588937 SYT11Q9BT88 431 aa16.54■□□□□ 0.24
MBD1-217ENST00000588937 SELENOOQ9BVL4 669 aa16.54■□□□□ 0.24
MBD1-217ENST00000588937 LCTP09848 1927 aa16.54■□□□□ 0.24
MBD1-217ENST00000588937 MYH9P35579 1960 aaKnown RBP16.54■□□□□ 0.24
MBD1-217ENST00000588937 KIF4AO95239 1232 aa16.54■□□□□ 0.24
MBD1-217ENST00000588937 ATG7O95352 703 aa16.54■□□□□ 0.24
MBD1-217ENST00000588937 OAS2P29728 719 aaKnown RBP16.54■□□□□ 0.24
MBD1-217ENST00000588937 ADSSP30520 456 aa16.54■□□□□ 0.24
MBD1-217ENST00000588937 GALCP54803 685 aa16.54■□□□□ 0.24
MBD1-217ENST00000588937 SP4Q02446 784 aa16.54■□□□□ 0.24
MBD1-217ENST00000588937 C1orf220Q5T0J3 134 aa16.54■□□□□ 0.24
MBD1-217ENST00000588937 KRT39Q6A163 491 aa16.54■□□□□ 0.24
MBD1-217ENST00000588937 CCNI2Q6ZMN8 369 aaPredicted RBP16.54■□□□□ 0.24
MBD1-217ENST00000588937 LRRC57Q8N9N7 239 aa16.54■□□□□ 0.24
MBD1-217ENST00000588937 CTNNBL1Q8WYA6 563 aaPredicted RBP16.54■□□□□ 0.24
MBD1-217ENST00000588937 FBXL18Q96ME1 805 aa16.54■□□□□ 0.24
MBD1-217ENST00000588937 TMEM8AQ9HCN3 771 aa16.54■□□□□ 0.24
MBD1-217ENST00000588937 PRDM10Q9NQV6 1147 aa16.54■□□□□ 0.24
MBD1-217ENST00000588937 ZNF302Q9NR11 478 aa16.54■□□□□ 0.24
MBD1-217ENST00000588937 DOCK5Q9H7D0 1870 aa16.53■□□□□ 0.24
MBD1-217ENST00000588937 NCANO14594 1321 aa16.53■□□□□ 0.24
MBD1-217ENST00000588937 OTOFQ9HC10 1997 aa16.53■□□□□ 0.24
MBD1-217ENST00000588937 ANKRD63C9JTQ0 380 aa16.53■□□□□ 0.24
MBD1-217ENST00000588937 FOXN3O00409 490 aaPredicted RBP16.53■□□□□ 0.24
MBD1-217ENST00000588937 ALDH5A1P51649 535 aaPredicted RBP16.53■□□□□ 0.24
MBD1-217ENST00000588937 PPATQ06203 517 aa16.53■□□□□ 0.24
MBD1-217ENST00000588937 DMTNQ08495 405 aa16.53■□□□□ 0.24
MBD1-217ENST00000588937 TERF2Q15554 542 aa16.53■□□□□ 0.24
MBD1-217ENST00000588937 TREML2Q5T2D2 321 aa16.53■□□□□ 0.24
MBD1-217ENST00000588937 SLFN11Q7Z7L1 901 aa16.53■□□□□ 0.24
MBD1-217ENST00000588937 GLYCTKQ8IVS8 523 aa16.53■□□□□ 0.24
MBD1-217ENST00000588937 BSNDQ8WZ55 320 aa16.53■□□□□ 0.24
MBD1-217ENST00000588937 POMGNT1Q8WZA1 660 aa16.53■□□□□ 0.24
MBD1-217ENST00000588937 KCNN1Q92952 543 aa16.53■□□□□ 0.24
MBD1-217ENST00000588937 MFSD14AQ96MC6 490 aa16.53■□□□□ 0.24
MBD1-217ENST00000588937 MPHOSPH6Q99547 160 aaKnown RBP16.53■□□□□ 0.24
MBD1-217ENST00000588937 AGPAT1Q99943 283 aa16.53■□□□□ 0.24
MBD1-217ENST00000588937 KIFC3Q9BVG8 833 aa16.53■□□□□ 0.24
MBD1-217ENST00000588937 TMEM117Q9H0C3 514 aa16.53■□□□□ 0.24
MBD1-217ENST00000588937 POLR3FQ9H1D9 316 aaPredicted RBP16.53■□□□□ 0.24
MBD1-217ENST00000588937 KIAA1586Q9HCI6 787 aa16.53■□□□□ 0.24
MBD1-217ENST00000588937 MAFBQ9Y5Q3 323 aaPredicted RBP16.53■□□□□ 0.24
MBD1-217ENST00000588937 A0A0U1RQG5 324 aaPredicted RBP16.52■□□□□ 0.24
MBD1-217ENST00000588937 ANKRD62A6NC57 917 aa16.52■□□□□ 0.24
MBD1-217ENST00000588937 GOLGA8IPA6NC78 632 aa16.52■□□□□ 0.24
MBD1-217ENST00000588937 GOLGA8JA6NMD2 632 aa16.52■□□□□ 0.24
MBD1-217ENST00000588937 KIAA0391O15091 583 aaKnown RBP16.52■□□□□ 0.24
MBD1-217ENST00000588937 LRRN2O75325 713 aa16.52■□□□□ 0.24
MBD1-217ENST00000588937 ADRB2P07550 413 aa16.52■□□□□ 0.24
MBD1-217ENST00000588937 MATR3P43243 847 aaKnown RBP eCLIP16.52■□□□□ 0.24
MBD1-217ENST00000588937 POLGP54098 1239 aaPredicted RBP16.52■□□□□ 0.24
MBD1-217ENST00000588937 MFAP3P55082 362 aa16.52■□□□□ 0.24
MBD1-217ENST00000588937 IRX3P78415 501 aaPredicted RBP16.52■□□□□ 0.24
MBD1-217ENST00000588937 C8orf74Q6P047 294 aa16.52■□□□□ 0.24
MBD1-217ENST00000588937 GADL1Q6ZQY3 521 aa16.52■□□□□ 0.24
MBD1-217ENST00000588937 CYFIP1Q7L576 1253 aa16.52■□□□□ 0.24
MBD1-217ENST00000588937 PEX26Q7Z412 305 aa16.52■□□□□ 0.24
MBD1-217ENST00000588937 CBWD2Q8IUF1 395 aa16.52■□□□□ 0.24
MBD1-217ENST00000588937 GPD1LQ8N335 351 aa16.52■□□□□ 0.24
MBD1-217ENST00000588937 PLEKHO2Q8TD55 490 aa16.52■□□□□ 0.24
MBD1-217ENST00000588937 PARD3BQ8TEW8 1205 aa16.52■□□□□ 0.24
MBD1-217ENST00000588937 RFFLQ8WZ73 363 aa16.52■□□□□ 0.24
MBD1-217ENST00000588937 LRRC1Q9BTT6 524 aa16.52■□□□□ 0.24
MBD1-217ENST00000588937 XPNPEP1Q9NQW7 623 aa16.52■□□□□ 0.24
MBD1-217ENST00000588937 ARHGAP28Q9P2N2 729 aa16.52■□□□□ 0.24
MBD1-217ENST00000588937 SUCLA2Q9P2R7 463 aaPredicted RBP16.52■□□□□ 0.24
MBD1-217ENST00000588937 COQ4Q9Y3A0 265 aa16.52■□□□□ 0.24
MBD1-217ENST00000588937 A0A0G2JLL6 359 aaPredicted RBP16.51■□□□□ 0.23
MBD1-217ENST00000588937 ADM5C9JUS6 153 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 CXCL11O14625 94 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 HNRNPDLO14979 420 aaKnown RBP16.51■□□□□ 0.23
MBD1-217ENST00000588937 OATP04181 439 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 TNFRSF8P28908 595 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 NF2P35240 595 aa16.51■□□□□ 0.23
MBD1-217ENST00000588937 COPB2P35606 906 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms