RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 SOD2P04179 222 aa24.48■■□□□ 1.51
CAPNS1-205ENST00000588780 SDHBP21912 280 aa24.48■■□□□ 1.51
CAPNS1-205ENST00000588780 CREB3L3Q68CJ9 461 aa24.48■■□□□ 1.51
CAPNS1-205ENST00000588780 ZNF410Q86VK4 478 aa24.48■■□□□ 1.51
CAPNS1-205ENST00000588780 PJA1Q8NG27 643 aa24.48■■□□□ 1.51
CAPNS1-205ENST00000588780 EXOC6Q8TAG9 804 aa24.48■■□□□ 1.51
CAPNS1-205ENST00000588780 CRYGNQ8WXF5 182 aa24.48■■□□□ 1.51
CAPNS1-205ENST00000588780 SHDQ96IW2 340 aa24.48■■□□□ 1.51
CAPNS1-205ENST00000588780 SH2D3AQ9BRG2 576 aa24.48■■□□□ 1.51
CAPNS1-205ENST00000588780 RSAD1Q9HA92 442 aa24.48■■□□□ 1.51
CAPNS1-205ENST00000588780 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.48■■□□□ 1.51
CAPNS1-205ENST00000588780 SPTBN2O15020 2390 aa24.47■■□□□ 1.51
CAPNS1-205ENST00000588780 POTEMA6NI47 508 aa24.47■■□□□ 1.51
CAPNS1-205ENST00000588780 SFNP31947 248 aa24.47■■□□□ 1.51
CAPNS1-205ENST00000588780 OR1G1P47890 313 aa24.47■■□□□ 1.51
CAPNS1-205ENST00000588780 JAK3P52333 1124 aa24.47■■□□□ 1.51
CAPNS1-205ENST00000588780 FUT2Q10981 343 aa24.47■■□□□ 1.51
CAPNS1-205ENST00000588780 VARS2Q5ST30 1063 aaKnown RBP24.47■■□□□ 1.51
CAPNS1-205ENST00000588780 POTEGQ6S5H5 508 aa24.47■■□□□ 1.51
CAPNS1-205ENST00000588780 PALB2Q86YC2 1186 aa24.47■■□□□ 1.51
CAPNS1-205ENST00000588780 SUMF1Q8NBK3 374 aa24.47■■□□□ 1.51
CAPNS1-205ENST00000588780 SECISBP2LQ93073 1101 aaKnown RBP24.47■■□□□ 1.51
CAPNS1-205ENST00000588780 DLGAP2Q9P1A6 1054 aa24.47■■□□□ 1.51
CAPNS1-205ENST00000588780 LAMTOR5O43504 91 aa24.46■■□□□ 1.51
CAPNS1-205ENST00000588780 LRRN2O75325 713 aa24.46■■□□□ 1.51
CAPNS1-205ENST00000588780 LAMP2P13473 410 aa24.46■■□□□ 1.51
CAPNS1-205ENST00000588780 GLUD2P49448 558 aa24.46■■□□□ 1.51
CAPNS1-205ENST00000588780 LRCH2Q5VUJ6 765 aa24.46■■□□□ 1.51
CAPNS1-205ENST00000588780 AGMOQ6ZNB7 445 aa24.46■■□□□ 1.51
CAPNS1-205ENST00000588780 KSR1Q8IVT5 923 aa24.46■■□□□ 1.51
CAPNS1-205ENST00000588780 CCDC12Q8WUD4 166 aaPredicted RBP24.46■■□□□ 1.51
CAPNS1-205ENST00000588780 TCEANC2Q96MN5 208 aa24.46■■□□□ 1.51
CAPNS1-205ENST00000588780 HERC2P3Q9BVR0 1158 aa24.46■■□□□ 1.51
CAPNS1-205ENST00000588780 TEKT3Q9BXF9 490 aa24.46■■□□□ 1.51
CAPNS1-205ENST00000588780 BCO2Q9BYV7 579 aa24.46■■□□□ 1.51
CAPNS1-205ENST00000588780 BRPF3Q9ULD4 1205 aa24.46■■□□□ 1.51
CAPNS1-205ENST00000588780 NUMBLQ9Y6R0 609 aa24.46■■□□□ 1.51
CAPNS1-205ENST00000588780 CACNA1IQ9P0X4 2223 aa24.46■■□□□ 1.51
CAPNS1-205ENST00000588780 TMEM150BA6NC51 233 aa24.45■■□□□ 1.5
CAPNS1-205ENST00000588780 AFF1P51825 1210 aaKnown RBP24.45■■□□□ 1.5
CAPNS1-205ENST00000588780 TARBP2Q15633 366 aaKnown RBP24.45■■□□□ 1.5
CAPNS1-205ENST00000588780 PFKFB3Q16875 520 aaPredicted RBP24.45■■□□□ 1.5
CAPNS1-205ENST00000588780 TAS1R1Q7RTX1 841 aa24.45■■□□□ 1.5
CAPNS1-205ENST00000588780 MIER3Q7Z3K6 550 aa24.45■■□□□ 1.5
CAPNS1-205ENST00000588780 GLYCTKQ8IVS8 523 aa24.45■■□□□ 1.5
CAPNS1-205ENST00000588780 ATRIPQ8WXE1 791 aa24.45■■□□□ 1.5
CAPNS1-205ENST00000588780 UNC45AQ9H3U1 944 aa24.45■■□□□ 1.5
CAPNS1-205ENST00000588780 CDV3Q9UKY7 258 aaKnown RBP24.45■■□□□ 1.5
CAPNS1-205ENST00000588780 ACACBO00763 2458 aa24.44■■□□□ 1.5
CAPNS1-205ENST00000588780 GPR179Q6PRD1 2367 aa24.44■■□□□ 1.5
CAPNS1-205ENST00000588780 CNTNAP2Q9UHC6 1331 aa24.44■■□□□ 1.5
CAPNS1-205ENST00000588780 DDX11L8A8MPP1 907 aa24.44■■□□□ 1.5
CAPNS1-205ENST00000588780 MSH4O15457 936 aa24.44■■□□□ 1.5
CAPNS1-205ENST00000588780 GAS2O43903 313 aaKnown RBP24.44■■□□□ 1.5
CAPNS1-205ENST00000588780 GLULP15104 373 aa24.44■■□□□ 1.5
CAPNS1-205ENST00000588780 XKR3Q5GH77 459 aa24.44■■□□□ 1.5
CAPNS1-205ENST00000588780 GPR161Q8N6U8 529 aaKnown RBP24.44■■□□□ 1.5
CAPNS1-205ENST00000588780 CCDC136Q96JN2 1154 aa24.44■■□□□ 1.5
CAPNS1-205ENST00000588780 RHOBTB2Q9BYZ6 727 aa24.44■■□□□ 1.5
CAPNS1-205ENST00000588780 LSG1Q9H089 658 aaKnown RBP24.44■■□□□ 1.5
CAPNS1-205ENST00000588780 SLC2A4RGQ9NR83 387 aa24.44■■□□□ 1.5
CAPNS1-205ENST00000588780 KLF18A0A0U1RQI7 1052 aa24.43■■□□□ 1.5
CAPNS1-205ENST00000588780 ADAMTS3O15072 1205 aa24.43■■□□□ 1.5
CAPNS1-205ENST00000588780 GNA11P29992 359 aa24.43■■□□□ 1.5
CAPNS1-205ENST00000588780 CSTF1Q05048 431 aaKnown RBP24.43■■□□□ 1.5
CAPNS1-205ENST00000588780 SNW1Q13573 536 aaKnown RBP24.43■■□□□ 1.5
CAPNS1-205ENST00000588780 HTR4Q13639 388 aa24.43■■□□□ 1.5
CAPNS1-205ENST00000588780 UBXN2BQ14CS0 331 aa24.43■■□□□ 1.5
CAPNS1-205ENST00000588780 KIAA0319Q5VV43 1072 aa24.43■■□□□ 1.5
CAPNS1-205ENST00000588780 ZNF707Q96C28 371 aaPredicted RBP24.43■■□□□ 1.5
CAPNS1-205ENST00000588780 RIT2Q99578 217 aa24.43■■□□□ 1.5
CAPNS1-205ENST00000588780 NIFKQ9BYG3 293 aaKnown RBP24.43■■□□□ 1.5
CAPNS1-205ENST00000588780 ZMYND12Q9H0C1 365 aa24.43■■□□□ 1.5
CAPNS1-205ENST00000588780 NT5C3AQ9H0P0 336 aa24.43■■□□□ 1.5
CAPNS1-205ENST00000588780 PLEKHA4Q9H4M7 779 aa24.43■■□□□ 1.5
CAPNS1-205ENST00000588780 ANO2Q9NQ90 1003 aa24.43■■□□□ 1.5
CAPNS1-205ENST00000588780 AGPAT5Q9NUQ2 364 aa24.43■■□□□ 1.5
CAPNS1-205ENST00000588780 DNAH14Q0VDD8 3507 aa24.43■■□□□ 1.5
CAPNS1-205ENST00000588780 WDR81Q562E7 1941 aa24.42■■□□□ 1.5
CAPNS1-205ENST00000588780 ESYT2A0FGR8 921 aa24.42■■□□□ 1.5
CAPNS1-205ENST00000588780 SPTLC1O15269 473 aa24.42■■□□□ 1.5
CAPNS1-205ENST00000588780 NR1I2O75469 434 aa24.42■■□□□ 1.5
CAPNS1-205ENST00000588780 CDC27P30260 824 aa24.42■■□□□ 1.5
CAPNS1-205ENST00000588780 CIITAP33076 1130 aa24.42■■□□□ 1.5
CAPNS1-205ENST00000588780 ATXN1P54253 815 aaKnown RBP24.42■■□□□ 1.5
CAPNS1-205ENST00000588780 GPC5P78333 572 aa24.42■■□□□ 1.5
CAPNS1-205ENST00000588780 GJA10Q969M2 543 aa24.42■■□□□ 1.5
CAPNS1-205ENST00000588780 USP18Q9UMW8 372 aa24.42■■□□□ 1.5
CAPNS1-205ENST00000588780 FANCMQ8IYD8 2048 aa24.41■■□□□ 1.5
CAPNS1-205ENST00000588780 ANHXE9PGG2 379 aa24.41■■□□□ 1.5
CAPNS1-205ENST00000588780 STARD6P59095 220 aa24.41■■□□□ 1.5
CAPNS1-205ENST00000588780 FGD1P98174 961 aa24.41■■□□□ 1.5
CAPNS1-205ENST00000588780 RNF20Q5VTR2 975 aa24.41■■□□□ 1.5
CAPNS1-205ENST00000588780 BICD2Q8TD16 824 aa24.41■■□□□ 1.5
CAPNS1-205ENST00000588780 HDAC7Q8WUI4 952 aa24.41■■□□□ 1.5
CAPNS1-205ENST00000588780 LENG9Q96B70 501 aa24.41■■□□□ 1.5
CAPNS1-205ENST00000588780 JPH2Q9BR39 696 aaPredicted RBP24.41■■□□□ 1.5
CAPNS1-205ENST00000588780 PRKD2Q9BZL6 878 aa24.41■■□□□ 1.5
CAPNS1-205ENST00000588780 MARCH5Q9NX47 278 aa24.41■■□□□ 1.5
CAPNS1-205ENST00000588780 ZDHHC7Q9NXF8 308 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms