RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 GDPD2Q9HCC8 539 aa22.3■■□□□ 1.16
DDX39A-207ENST00000588542 PRMT7Q9NVM4 692 aaPredicted RBP22.3■■□□□ 1.16
DDX39A-207ENST00000588542 MTMR10Q9NXD2 777 aa22.3■■□□□ 1.16
DDX39A-207ENST00000588542 ARHGAP28Q9P2N2 729 aa22.3■■□□□ 1.16
DDX39A-207ENST00000588542 CCDC169A6NNP5 214 aa22.29■■□□□ 1.16
DDX39A-207ENST00000588542 PRKCBP05771 671 aa22.29■■□□□ 1.16
DDX39A-207ENST00000588542 EFNA5P52803 228 aa22.29■■□□□ 1.16
DDX39A-207ENST00000588542 MAPK6Q16659 721 aa22.29■■□□□ 1.16
DDX39A-207ENST00000588542 TAS1R3Q7RTX0 852 aa22.29■■□□□ 1.16
DDX39A-207ENST00000588542 DNAJC19Q96DA6 116 aa22.29■■□□□ 1.16
DDX39A-207ENST00000588542 KMT5AQ9NQR1 393 aa22.29■■□□□ 1.16
DDX39A-207ENST00000588542 FAM105AQ9NUU6 356 aa22.29■■□□□ 1.16
DDX39A-207ENST00000588542 RNF216Q9NWF9 866 aaPredicted RBP22.29■■□□□ 1.16
DDX39A-207ENST00000588542 USP20Q9Y2K6 914 aa22.29■■□□□ 1.16
DDX39A-207ENST00000588542 COL4A4P53420 1690 aaPredicted RBP22.29■■□□□ 1.16
DDX39A-207ENST00000588542 ACKR2O00590 384 aa22.28■■□□□ 1.16
DDX39A-207ENST00000588542 SLC16A4O15374 487 aa22.28■■□□□ 1.16
DDX39A-207ENST00000588542 POLR2DO15514 142 aaKnown RBP22.28■■□□□ 1.16
DDX39A-207ENST00000588542 ZNF623O75123 536 aa22.28■■□□□ 1.16
DDX39A-207ENST00000588542 EOMESO95936 686 aa22.28■■□□□ 1.16
DDX39A-207ENST00000588542 FGFR1P11362 822 aa22.28■■□□□ 1.16
DDX39A-207ENST00000588542 GRIN2CQ14957 1233 aa22.28■■□□□ 1.16
DDX39A-207ENST00000588542 NOTUMQ6P988 496 aa22.28■■□□□ 1.16
DDX39A-207ENST00000588542 DDX12PQ92771 950 aa22.28■■□□□ 1.16
DDX39A-207ENST00000588542 DHX58Q96C10 678 aa22.28■■□□□ 1.16
DDX39A-207ENST00000588542 EIF2AQ9BY44 585 aaKnown RBP22.28■■□□□ 1.16
DDX39A-207ENST00000588542 FAM13BQ9NYF5 915 aa22.28■■□□□ 1.16
DDX39A-207ENST00000588542 CNTNAP2Q9UHC6 1331 aa22.28■■□□□ 1.16
DDX39A-207ENST00000588542 A0A1B0GUA9 196 aa22.27■■□□□ 1.16
DDX39A-207ENST00000588542 KRT18P05783 430 aaKnown RBP22.27■■□□□ 1.16
DDX39A-207ENST00000588542 LINC00271P0C7V0 271 aa22.27■■□□□ 1.16
DDX39A-207ENST00000588542 CMA1P23946 247 aa22.27■■□□□ 1.16
DDX39A-207ENST00000588542 RAB27AP51159 221 aa22.27■■□□□ 1.16
DDX39A-207ENST00000588542 NCBP1Q09161 790 aaKnown RBP22.27■■□□□ 1.16
DDX39A-207ENST00000588542 DYMQ7RTS9 669 aa22.27■■□□□ 1.16
DDX39A-207ENST00000588542 MRPL10Q7Z7H8 261 aaKnown RBP22.27■■□□□ 1.16
DDX39A-207ENST00000588542 CDR2LQ86X02 465 aaPredicted RBP22.27■■□□□ 1.16
DDX39A-207ENST00000588542 CMTR2Q8IYT2 770 aaKnown RBP22.27■■□□□ 1.16
DDX39A-207ENST00000588542 IQUBQ8NA54 791 aa22.27■■□□□ 1.16
DDX39A-207ENST00000588542 TMEM161BQ8NDZ6 487 aa22.27■■□□□ 1.16
DDX39A-207ENST00000588542 CCDC51Q96ER9 411 aa22.27■■□□□ 1.16
DDX39A-207ENST00000588542 GUCD1Q96NT3 240 aa22.27■■□□□ 1.16
DDX39A-207ENST00000588542 CUEDC2Q9H467 287 aa22.27■■□□□ 1.16
DDX39A-207ENST00000588542 TMEM134Q9H6X4 195 aa22.27■■□□□ 1.16
DDX39A-207ENST00000588542 TSHZ2Q9NRE2 1034 aa22.27■■□□□ 1.16
DDX39A-207ENST00000588542 KBTBD4Q9NVX7 518 aa22.27■■□□□ 1.16
DDX39A-207ENST00000588542 LARSQ9P2J5 1176 aaKnown RBP22.27■■□□□ 1.16
DDX39A-207ENST00000588542 RBM19Q9Y4C8 960 aaKnown RBP22.27■■□□□ 1.16
DDX39A-207ENST00000588542 PCDHB2Q9Y5E7 798 aa22.27■■□□□ 1.16
DDX39A-207ENST00000588542 PHLPP2Q6ZVD8 1323 aa22.27■■□□□ 1.16
DDX39A-207ENST00000588542 MEIS3P2A8K0S8 358 aa22.26■■□□□ 1.15
DDX39A-207ENST00000588542 K7ERI5 159 aa22.26■■□□□ 1.15
DDX39A-207ENST00000588542 FAM13AO94988 1023 aa22.26■■□□□ 1.15
DDX39A-207ENST00000588542 SKIP12755 728 aa22.26■■□□□ 1.15
DDX39A-207ENST00000588542 LIG1P18858 919 aa22.26■■□□□ 1.15
DDX39A-207ENST00000588542 NCKAP1LP55160 1127 aa22.26■■□□□ 1.15
DDX39A-207ENST00000588542 ERVK-21P61565 698 aa22.26■■□□□ 1.15
DDX39A-207ENST00000588542 PRPF4BQ13523 1007 aaKnown RBP22.26■■□□□ 1.15
DDX39A-207ENST00000588542 BTG3Q14201 252 aaPredicted RBP22.26■■□□□ 1.15
DDX39A-207ENST00000588542 PAN2Q504Q3 1202 aaKnown RBP22.26■■□□□ 1.15
DDX39A-207ENST00000588542 CLLU1OSQ5K130 101 aa22.26■■□□□ 1.15
DDX39A-207ENST00000588542 NT5DC1Q5TFE4 455 aa22.26■■□□□ 1.15
DDX39A-207ENST00000588542 FIBCD1Q8N539 461 aa22.26■■□□□ 1.15
DDX39A-207ENST00000588542 RNF169Q8NCN4 708 aa22.26■■□□□ 1.15
DDX39A-207ENST00000588542 SMG8Q8ND04 991 aaKnown RBP22.26■■□□□ 1.15
DDX39A-207ENST00000588542 STAMQ92783 540 aa22.26■■□□□ 1.15
DDX39A-207ENST00000588542 LPPQ93052 612 aa22.26■■□□□ 1.15
DDX39A-207ENST00000588542 FIZ1Q96SL8 496 aa22.26■■□□□ 1.15
DDX39A-207ENST00000588542 CERS4Q9HA82 394 aa22.26■■□□□ 1.15
DDX39A-207ENST00000588542 PARVGQ9HBI0 331 aa22.26■■□□□ 1.15
DDX39A-207ENST00000588542 KCNH3Q9ULD8 1083 aa22.26■■□□□ 1.15
DDX39A-207ENST00000588542 HPSEQ9Y251 543 aa22.26■■□□□ 1.15
DDX39A-207ENST00000588542 FAM237AA0A1B0GTK4 181 aa22.25■■□□□ 1.15
DDX39A-207ENST00000588542 A0A1B0GVL5 298 aa22.25■■□□□ 1.15
DDX39A-207ENST00000588542 EPOPA6NHQ4 379 aa22.25■■□□□ 1.15
DDX39A-207ENST00000588542 MAPTP10636 758 aaKnown RBP22.25■■□□□ 1.15
DDX39A-207ENST00000588542 PFKFB1P16118 471 aa22.25■■□□□ 1.15
DDX39A-207ENST00000588542 SMTNP53814 917 aa22.25■■□□□ 1.15
DDX39A-207ENST00000588542 LONRF3Q496Y0 759 aa22.25■■□□□ 1.15
DDX39A-207ENST00000588542 MYCT1Q8N699 235 aa22.25■■□□□ 1.15
DDX39A-207ENST00000588542 KCNN1Q92952 543 aa22.25■■□□□ 1.15
DDX39A-207ENST00000588542 CASD1Q96PB1 797 aa22.25■■□□□ 1.15
DDX39A-207ENST00000588542 TGS1Q96RS0 853 aaKnown RBP22.25■■□□□ 1.15
DDX39A-207ENST00000588542 C17orf80Q9BSJ5 609 aa22.25■■□□□ 1.15
DDX39A-207ENST00000588542 TNMDQ9H2S6 317 aa22.25■■□□□ 1.15
DDX39A-207ENST00000588542 PDZD7Q9H5P4 517 aa22.25■■□□□ 1.15
DDX39A-207ENST00000588542 KCNG1Q9UIX4 513 aa22.25■■□□□ 1.15
DDX39A-207ENST00000588542 TDRD15B5MCY1 1934 aaKnown RBP22.24■■□□□ 1.15
DDX39A-207ENST00000588542 TBKBP1A7MCY6 615 aa22.24■■□□□ 1.15
DDX39A-207ENST00000588542 TBCAO75347 108 aaKnown RBP22.24■■□□□ 1.15
DDX39A-207ENST00000588542 EEF1DP3Q658K8 133 aa22.24■■□□□ 1.15
DDX39A-207ENST00000588542 SLC27A1Q6PCB7 646 aa22.24■■□□□ 1.15
DDX39A-207ENST00000588542 AGMOQ6ZNB7 445 aa22.24■■□□□ 1.15
DDX39A-207ENST00000588542 CLP1Q92989 425 aaKnown RBP22.24■■□□□ 1.15
DDX39A-207ENST00000588542 TMEM117Q9H0C3 514 aa22.24■■□□□ 1.15
DDX39A-207ENST00000588542 PRDM12Q9H4Q4 367 aa22.24■■□□□ 1.15
DDX39A-207ENST00000588542 CHMP5Q9NZZ3 219 aa22.24■■□□□ 1.15
DDX39A-207ENST00000588542 IPPQ9Y573 584 aa22.24■■□□□ 1.15
DDX39A-207ENST00000588542 MRPL42Q9Y6G3 142 aaKnown RBP22.24■■□□□ 1.15
DDX39A-207ENST00000588542 TRIP11Q15643 1979 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms